RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 UBE2G2P60604 165 aa19.76■□□□□ 0.75
DNMT3A-206ENST00000406659 ZNF674Q2M3X9 581 aa19.76■□□□□ 0.75
DNMT3A-206ENST00000406659 SPATA31B1PQ5VZV4 182 aa19.76■□□□□ 0.75
DNMT3A-206ENST00000406659 CST9LP1Q5W188 147 aa19.76■□□□□ 0.75
DNMT3A-206ENST00000406659 HIST1H2BAQ96A08 127 aa19.76■□□□□ 0.75
DNMT3A-206ENST00000406659 SDF2L1Q9HCN8 221 aa19.76■□□□□ 0.75
DNMT3A-206ENST00000406659 SEPSECSQ9HD40 501 aaKnown RBP19.76■□□□□ 0.75
DNMT3A-206ENST00000406659 MT-CO2P00403 227 aa19.75■□□□□ 0.75
DNMT3A-206ENST00000406659 MT-ND4LP03901 98 aa19.75■□□□□ 0.75
DNMT3A-206ENST00000406659 RPUSD4Q96CM3 377 aaKnown RBP19.75■□□□□ 0.75
DNMT3A-206ENST00000406659 FNDC4Q9H6D8 234 aaPredicted RBP19.75■□□□□ 0.75
DNMT3A-206ENST00000406659 CRYBA1P05813 215 aa19.75■□□□□ 0.75
DNMT3A-206ENST00000406659 CFHR4Q92496 578 aa19.75■□□□□ 0.75
DNMT3A-206ENST00000406659 BPESC1Q9GZL8 116 aa19.75■□□□□ 0.75
DNMT3A-206ENST00000406659 NAT8Q9UHE5 227 aa19.75■□□□□ 0.75
DNMT3A-206ENST00000406659 AREGP15514 252 aa19.74■□□□□ 0.75
DNMT3A-206ENST00000406659 GATA2P23769 480 aaPredicted RBP19.74■□□□□ 0.75
DNMT3A-206ENST00000406659 MMDQ15546 238 aa19.74■□□□□ 0.75
DNMT3A-206ENST00000406659 TMEM241Q24JQ0 296 aa19.74■□□□□ 0.75
DNMT3A-206ENST00000406659 FAM78BQ5VT40 261 aa19.74■□□□□ 0.75
DNMT3A-206ENST00000406659 ETFRF1Q6IPR1 90 aa19.74■□□□□ 0.75
DNMT3A-206ENST00000406659 CYP2G1PQ6ZSU1 146 aa19.74■□□□□ 0.75
DNMT3A-206ENST00000406659 ZNF114Q8NC26 417 aa19.74■□□□□ 0.75
DNMT3A-206ENST00000406659 NPIPB3Q92617 1050 aa19.74■□□□□ 0.75
DNMT3A-206ENST00000406659 MISP3Q96FF7 219 aa19.74■□□□□ 0.75
DNMT3A-206ENST00000406659 C19orf24Q9BVV8 132 aa19.74■□□□□ 0.75
DNMT3A-206ENST00000406659 HOXB4P17483 251 aaPredicted RBP19.73■□□□□ 0.75
DNMT3A-206ENST00000406659 GCHFRP30047 84 aa19.73■□□□□ 0.75
DNMT3A-206ENST00000406659 LGALS4P56470 323 aa19.73■□□□□ 0.75
DNMT3A-206ENST00000406659 FAM24BQ8N5W8 94 aa19.73■□□□□ 0.75
DNMT3A-206ENST00000406659 SIRPDQ9H106 197 aa19.73■□□□□ 0.75
DNMT3A-206ENST00000406659 FUT9Q9Y231 359 aa19.73■□□□□ 0.75
DNMT3A-206ENST00000406659 IGSF10Q6WRI0 2623 aa19.73■□□□□ 0.75
DNMT3A-206ENST00000406659 IGHV2-70DA0A0C4DH43 119 aa19.72■□□□□ 0.75
DNMT3A-206ENST00000406659 FCN1O00602 326 aa19.72■□□□□ 0.75
DNMT3A-206ENST00000406659 PDE6DO43924 150 aa19.72■□□□□ 0.75
DNMT3A-206ENST00000406659 MOSP00540 346 aa19.72■□□□□ 0.75
DNMT3A-206ENST00000406659 APELAP0DMC3 54 aa19.72■□□□□ 0.75
DNMT3A-206ENST00000406659 PDLIM4P50479 330 aa19.72■□□□□ 0.75
DNMT3A-206ENST00000406659 LMO4P61968 165 aa19.72■□□□□ 0.75
DNMT3A-206ENST00000406659 FLI1Q01543 452 aaPredicted RBP19.72■□□□□ 0.75
DNMT3A-206ENST00000406659 PAX2Q02962 417 aa19.72■□□□□ 0.75
DNMT3A-206ENST00000406659 HABP2Q14520 560 aaPredicted RBP19.72■□□□□ 0.75
DNMT3A-206ENST00000406659 CCDC144NLQ6NUI1 221 aa19.72■□□□□ 0.75
DNMT3A-206ENST00000406659 PARLQ9H300 379 aa19.72■□□□□ 0.75
DNMT3A-206ENST00000406659 PLXNB1O43157 2135 aa19.72■□□□□ 0.75
DNMT3A-206ENST00000406659 IGHV4-39P01824 125 aa19.72■□□□□ 0.75
DNMT3A-206ENST00000406659 SSX2Q16385 188 aa19.72■□□□□ 0.75
DNMT3A-206ENST00000406659 MINOS1Q5TGZ0 78 aa19.72■□□□□ 0.75
DNMT3A-206ENST00000406659 PVRIGQ6DKI7 326 aa19.72■□□□□ 0.75
DNMT3A-206ENST00000406659 MIR17HGQ75NE6 70 aa19.72■□□□□ 0.75
DNMT3A-206ENST00000406659 SRSF12Q8WXF0 261 aaKnown RBP19.72■□□□□ 0.75
DNMT3A-206ENST00000406659 TXNDC17Q9BRA2 123 aa19.72■□□□□ 0.75
DNMT3A-206ENST00000406659 MINOS1-NBL1R4GNA1 71 aa19.72■□□□□ 0.75
DNMT3A-206ENST00000406659 OOSP1A8MZH6 123 aa19.71■□□□□ 0.75
DNMT3A-206ENST00000406659 TEX22C9J3V5 150 aa19.71■□□□□ 0.75
DNMT3A-206ENST00000406659 NBR2O15453 112 aa19.71■□□□□ 0.75
DNMT3A-206ENST00000406659 FOXH1O75593 365 aa19.71■□□□□ 0.75
DNMT3A-206ENST00000406659 CNIH1O95406 144 aa19.71■□□□□ 0.75
DNMT3A-206ENST00000406659 IGHV3-48P01763 117 aa19.71■□□□□ 0.75
DNMT3A-206ENST00000406659 FOLR2P14207 255 aa19.71■□□□□ 0.75
DNMT3A-206ENST00000406659 ATP5G3P48201 142 aa19.71■□□□□ 0.75
DNMT3A-206ENST00000406659 HES1Q14469 280 aa19.71■□□□□ 0.75
DNMT3A-206ENST00000406659 OR1P1Q8NH06 330 aa19.71■□□□□ 0.75
DNMT3A-206ENST00000406659 CFAP46Q8IYW2 2715 aa19.71■□□□□ 0.74
DNMT3A-206ENST00000406659 F6UZH7 168 aa19.7■□□□□ 0.74
DNMT3A-206ENST00000406659 CLN5O75503 358 aa19.7■□□□□ 0.74
DNMT3A-206ENST00000406659 TOX4O94842 621 aa19.7■□□□□ 0.74
DNMT3A-206ENST00000406659 SSBP2P81877 361 aaPredicted RBP19.7■□□□□ 0.74
DNMT3A-206ENST00000406659 RNF212Q495C1 297 aa19.7■□□□□ 0.74
DNMT3A-206ENST00000406659 THAP8Q8NA92 274 aa19.7■□□□□ 0.74
DNMT3A-206ENST00000406659 TECRQ9NZ01 308 aaKnown RBP19.7■□□□□ 0.74
DNMT3A-206ENST00000406659 RND2P52198 227 aa19.7■□□□□ 0.74
DNMT3A-206ENST00000406659 MFAP2P55001 183 aa19.7■□□□□ 0.74
DNMT3A-206ENST00000406659 NPBQ8NG41 125 aa19.7■□□□□ 0.74
DNMT3A-206ENST00000406659 OR2T10Q8NGZ9 312 aa19.7■□□□□ 0.74
DNMT3A-206ENST00000406659 IGFBPL1Q8WX77 278 aa19.7■□□□□ 0.74
DNMT3A-206ENST00000406659 EAF1Q96JC9 268 aaPredicted RBP19.7■□□□□ 0.74
DNMT3A-206ENST00000406659 NAV3Q8IVL0 2385 aa19.69■□□□□ 0.74
DNMT3A-206ENST00000406659 CXorf65A6NEN9 183 aa19.69■□□□□ 0.74
DNMT3A-206ENST00000406659 CORTO00230 105 aa19.69■□□□□ 0.74
DNMT3A-206ENST00000406659 OR5G3P0C626 314 aa19.69■□□□□ 0.74
DNMT3A-206ENST00000406659 CD24P25063 80 aa19.69■□□□□ 0.74
DNMT3A-206ENST00000406659 ADIRFQ15847 76 aa19.69■□□□□ 0.74
DNMT3A-206ENST00000406659 CCL19Q99731 98 aa19.69■□□□□ 0.74
DNMT3A-206ENST00000406659 SRSF8Q9BRL6 282 aaKnown RBP19.69■□□□□ 0.74
DNMT3A-206ENST00000406659 F11RQ9Y624 299 aaKnown RBP19.69■□□□□ 0.74
DNMT3A-206ENST00000406659 TCRBV4S1A1TA0A5B7 111 aa19.68■□□□□ 0.74
DNMT3A-206ENST00000406659 RAB5AP20339 215 aa19.68■□□□□ 0.74
DNMT3A-206ENST00000406659 C22orf15Q8WYQ4 148 aa19.68■□□□□ 0.74
DNMT3A-206ENST00000406659 RNF2Q99496 336 aa19.68■□□□□ 0.74
DNMT3A-206ENST00000406659 SLC25A33Q9BSK2 321 aa19.68■□□□□ 0.74
DNMT3A-206ENST00000406659 CRYGCP07315 174 aa19.67■□□□□ 0.74
DNMT3A-206ENST00000406659 TAS2R45P59539 299 aa19.67■□□□□ 0.74
DNMT3A-206ENST00000406659 SELENOTP62341 195 aa19.67■□□□□ 0.74
DNMT3A-206ENST00000406659 KIAA0141Q14154 515 aaPredicted RBP19.67■□□□□ 0.74
DNMT3A-206ENST00000406659 C19orf35Q6ZS72 473 aa19.67■□□□□ 0.74
DNMT3A-206ENST00000406659 YPEL4Q96NS1 127 aa19.67■□□□□ 0.74
DNMT3A-206ENST00000406659 MRPL36Q9P0J6 103 aaKnown RBP19.67■□□□□ 0.74
DNMT3A-206ENST00000406659 NDUFA3O95167 84 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms