RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 ZNF491Q8N8L2 437 aa8.19□□□□□ -1.1
RPAIN-204ENST00000405578 ZNF114Q8NC26 417 aa8.19□□□□□ -1.1
RPAIN-204ENST00000405578 MYOZ3Q8TDC0 251 aa8.19□□□□□ -1.1
RPAIN-204ENST00000405578 C4orf3Q8WVX3 66 aa8.19□□□□□ -1.1
RPAIN-204ENST00000405578 CXorf58Q96LI9 332 aa8.19□□□□□ -1.1
RPAIN-204ENST00000405578 C2orf50Q96LR7 162 aa8.19□□□□□ -1.1
RPAIN-204ENST00000405578 U3KQ87 197 aa8.19□□□□□ -1.1
RPAIN-204ENST00000405578 RYR2Q92736 4967 aa8.19□□□□□ -1.1
RPAIN-204ENST00000405578 IGLV11-55A0A075B6I3 123 aa8.18□□□□□ -1.1
RPAIN-204ENST00000405578 TRBV9A0A0B4J1U6 114 aa8.18□□□□□ -1.1
RPAIN-204ENST00000405578 C7orf66A4D0T2 115 aa8.18□□□□□ -1.1
RPAIN-204ENST00000405578 CCSO14618 274 aa8.18□□□□□ -1.1
RPAIN-204ENST00000405578 GOSR2O14653 212 aa8.18□□□□□ -1.1
RPAIN-204ENST00000405578 SYNGR2O43760 224 aa8.18□□□□□ -1.1
RPAIN-204ENST00000405578 SCGB1D2O95969 90 aa8.18□□□□□ -1.1
RPAIN-204ENST00000405578 IFNA10P01566 189 aa8.18□□□□□ -1.1
RPAIN-204ENST00000405578 PF4P02776 101 aa8.18□□□□□ -1.1
RPAIN-204ENST00000405578 CYCSP99999 105 aaKnown RBP8.18□□□□□ -1.1
RPAIN-204ENST00000405578 EXOSC2Q13868 293 aaKnown RBP8.18□□□□□ -1.1
RPAIN-204ENST00000405578 C15orf32Q32M92 178 aa8.18□□□□□ -1.1
RPAIN-204ENST00000405578 ZBTB8BQ8NAP8 495 aaPredicted RBP8.18□□□□□ -1.1
RPAIN-204ENST00000405578 SLC24A4Q8NFF2 622 aa8.18□□□□□ -1.1
RPAIN-204ENST00000405578 DPF1Q92782 380 aa8.18□□□□□ -1.1
RPAIN-204ENST00000405578 EEF1AKMT3Q96AZ1 226 aa8.18□□□□□ -1.1
RPAIN-204ENST00000405578 P2RX4Q99571 388 aa8.18□□□□□ -1.1
RPAIN-204ENST00000405578 MED28Q9H204 178 aa8.18□□□□□ -1.1
RPAIN-204ENST00000405578 RBKSQ9H477 322 aa8.18□□□□□ -1.1
RPAIN-204ENST00000405578 SACSQ9NZJ4 4579 aa8.18□□□□□ -1.1
RPAIN-204ENST00000405578 TENM2Q9NT68 2774 aa8.17□□□□□ -1.1
RPAIN-204ENST00000405578 RPS10-NUDT3A0A1W2PQS6 291 aa8.17□□□□□ -1.1
RPAIN-204ENST00000405578 MPTX1A8MV57 137 aa8.17□□□□□ -1.1
RPAIN-204ENST00000405578 SCGB2A1O75556 95 aa8.17□□□□□ -1.1
RPAIN-204ENST00000405578 IGHV3-11P01762 117 aa8.17□□□□□ -1.1
RPAIN-204ENST00000405578 LGALS1P09382 135 aaKnown RBP8.17□□□□□ -1.1
RPAIN-204ENST00000405578 PVALBP20472 110 aaPredicted RBP8.17□□□□□ -1.1
RPAIN-204ENST00000405578 NPY1RP25929 384 aa8.17□□□□□ -1.1
RPAIN-204ENST00000405578 RAB11AP62491 216 aa8.17□□□□□ -1.1
RPAIN-204ENST00000405578 RUNX1Q01196 453 aa8.17□□□□□ -1.1
RPAIN-204ENST00000405578 ID3Q02535 119 aa8.17□□□□□ -1.1
RPAIN-204ENST00000405578 CD69Q07108 199 aa8.17□□□□□ -1.1
RPAIN-204ENST00000405578 KLK9Q2XQG4 91 aa8.17□□□□□ -1.1
RPAIN-204ENST00000405578 DEFB121Q5J5C9 76 aa8.17□□□□□ -1.1
RPAIN-204ENST00000405578 C8orf86Q6ZUL3 223 aa8.17□□□□□ -1.1
RPAIN-204ENST00000405578 OR4D5Q8NGN0 318 aa8.17□□□□□ -1.1
RPAIN-204ENST00000405578 VN1R17PQ8TDU5 208 aa8.17□□□□□ -1.1
RPAIN-204ENST00000405578 MISP3Q96FF7 219 aa8.17□□□□□ -1.1
RPAIN-204ENST00000405578 OR10C1Q96KK4 312 aa8.17□□□□□ -1.1
RPAIN-204ENST00000405578 FANCD2OSQ96PS1 177 aa8.17□□□□□ -1.1
RPAIN-204ENST00000405578 OR5B12Q96R08 314 aa8.17□□□□□ -1.1
RPAIN-204ENST00000405578 RAB40CQ96S21 281 aa8.17□□□□□ -1.1
RPAIN-204ENST00000405578 MAGT1Q9H0U3 335 aa8.17□□□□□ -1.1
RPAIN-204ENST00000405578 RANGRFQ9HD47 186 aaPredicted RBP8.17□□□□□ -1.1
RPAIN-204ENST00000405578 GAR1Q9NY12 217 aaKnown RBP8.17□□□□□ -1.1
RPAIN-204ENST00000405578 KLK9Q9UKQ9 250 aa8.17□□□□□ -1.1
RPAIN-204ENST00000405578 ALG5Q9Y673 324 aa8.17□□□□□ -1.1
RPAIN-204ENST00000405578 TRBV7-1A0A0A6YYK4 115 aa8.16□□□□□ -1.1
RPAIN-204ENST00000405578 L7N2F9 121 aa8.16□□□□□ -1.1
RPAIN-204ENST00000405578 CCL24O00175 119 aa8.16□□□□□ -1.1
RPAIN-204ENST00000405578 NDUFB8O95169 186 aa8.16□□□□□ -1.1
RPAIN-204ENST00000405578 RLN2P04090 185 aa8.16□□□□□ -1.1
RPAIN-204ENST00000405578 IFNA4P05014 189 aa8.16□□□□□ -1.1
RPAIN-204ENST00000405578 IAPPP10997 89 aa8.16□□□□□ -1.1
RPAIN-204ENST00000405578 MYCNOSP40205 109 aa8.16□□□□□ -1.1
RPAIN-204ENST00000405578 POLR2GP62487 172 aaKnown RBP eCLIP8.16□□□□□ -1.1
RPAIN-204ENST00000405578 VAMP2P63027 116 aa8.16□□□□□ -1.1
RPAIN-204ENST00000405578 KIAA0141Q14154 515 aaPredicted RBP8.16□□□□□ -1.1
RPAIN-204ENST00000405578 C2orf83Q53S99 150 aa8.16□□□□□ -1.1
RPAIN-204ENST00000405578 C19orf35Q6ZS72 473 aa8.16□□□□□ -1.1
RPAIN-204ENST00000405578 RNASEH2CQ8TDP1 164 aaKnown RBP8.16□□□□□ -1.1
RPAIN-204ENST00000405578 PINX1Q96BK5 328 aaKnown RBP8.16□□□□□ -1.1
RPAIN-204ENST00000405578 GNB4Q9HAV0 340 aa8.16□□□□□ -1.1
RPAIN-204ENST00000405578 MGAT4CQ9UBM8 478 aa8.16□□□□□ -1.1
RPAIN-204ENST00000405578 PEF1Q9UBV8 284 aaKnown RBP8.16□□□□□ -1.1
RPAIN-204ENST00000405578 PAIP2BQ9ULR5 123 aaKnown RBP8.16□□□□□ -1.1
RPAIN-204ENST00000405578 WI2-2373I1.2A0A1W2PRP0 233 aa8.15□□□□□ -1.1
RPAIN-204ENST00000405578 ADARB2-AS1A8MUL3 147 aa8.15□□□□□ -1.1
RPAIN-204ENST00000405578 SSSCA1O60232 199 aa8.15□□□□□ -1.1
RPAIN-204ENST00000405578 HSPB1P04792 205 aaKnown RBP8.15□□□□□ -1.1
RPAIN-204ENST00000405578 OR8U8P0C7N1 319 aa8.15□□□□□ -1.1
RPAIN-204ENST00000405578 PET100P0DJ07 73 aa8.15□□□□□ -1.1
RPAIN-204ENST00000405578 RNASE2P10153 161 aaKnown RBP8.15□□□□□ -1.1
RPAIN-204ENST00000405578 ZP3P21754 424 aa8.15□□□□□ -1.1
RPAIN-204ENST00000405578 OPRK1P41145 380 aa8.15□□□□□ -1.1
RPAIN-204ENST00000405578 S100A10P60903 97 aa8.15□□□□□ -1.1
RPAIN-204ENST00000405578 ZNF616Q08AN1 781 aa8.15□□□□□ -1.1
RPAIN-204ENST00000405578 BSXQ3C1V8 233 aa8.15□□□□□ -1.1
RPAIN-204ENST00000405578 ETFRF1Q6IPR1 90 aa8.15□□□□□ -1.1
RPAIN-204ENST00000405578 ZNF343Q6P1L6 599 aa8.15□□□□□ -1.1
RPAIN-204ENST00000405578 OR11H1Q8NG94 326 aa8.15□□□□□ -1.1
RPAIN-204ENST00000405578 OR1N2Q8NGR9 330 aa8.15□□□□□ -1.1
RPAIN-204ENST00000405578 ATP6V0BQ99437 205 aa8.15□□□□□ -1.1
RPAIN-204ENST00000405578 NMES1Q9C002 83 aa8.15□□□□□ -1.1
RPAIN-204ENST00000405578 C21orf62Q9NYP8 219 aa8.15□□□□□ -1.1
RPAIN-204ENST00000405578 STRAPQ9Y3F4 350 aaKnown RBP8.15□□□□□ -1.1
RPAIN-204ENST00000405578 ANKRD34BA5PLL1 514 aa8.14□□□□□ -1.11
RPAIN-204ENST00000405578 LINC01619G3V211 115 aa8.14□□□□□ -1.11
RPAIN-204ENST00000405578 I3L521 148 aa8.14□□□□□ -1.11
RPAIN-204ENST00000405578 MT-CO2P00403 227 aa8.14□□□□□ -1.11
RPAIN-204ENST00000405578 MBPP02686 304 aaPredicted RBP8.14□□□□□ -1.11
RPAIN-204ENST00000405578 IGLL1P15814 213 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms