RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 TMEM229BQ8NBD8 167 aa11.43□□□□□ -0.58
TPM1-207ENST00000403994 COPZ2Q9P299 210 aa11.43□□□□□ -0.58
TPM1-207ENST00000403994 A0A0B4J293 547 aa11.42□□□□□ -0.58
TPM1-207ENST00000403994 IGHV7-4-1A0A0J9YVY3 117 aa11.42□□□□□ -0.58
TPM1-207ENST00000403994 ST8SIA3O43173 380 aa11.42□□□□□ -0.58
TPM1-207ENST00000403994 RAB3DO95716 219 aa11.42□□□□□ -0.58
TPM1-207ENST00000403994 MFAP4P55083 255 aa11.42□□□□□ -0.58
TPM1-207ENST00000403994 SSBP1Q04837 148 aaKnown RBP11.42□□□□□ -0.58
TPM1-207ENST00000403994 TRIM16LQ309B1 348 aa11.42□□□□□ -0.58
TPM1-207ENST00000403994 LAMTOR1Q6IAA8 161 aa11.42□□□□□ -0.58
TPM1-207ENST00000403994 STEAP1BQ6NZ63 245 aa11.42□□□□□ -0.58
TPM1-207ENST00000403994 CCDC71LQ8N9Z2 235 aa11.42□□□□□ -0.58
TPM1-207ENST00000403994 TERB2Q8NHR7 220 aa11.42□□□□□ -0.58
TPM1-207ENST00000403994 ZFAND1Q8TCF1 268 aa11.42□□□□□ -0.58
TPM1-207ENST00000403994 MARCH1Q8TCQ1 289 aa11.42□□□□□ -0.58
TPM1-207ENST00000403994 SMIM4Q8WVI0 70 aa11.42□□□□□ -0.58
TPM1-207ENST00000403994 PINX1Q96BK5 328 aaKnown RBP11.42□□□□□ -0.58
TPM1-207ENST00000403994 OR10C1Q96KK4 312 aa11.42□□□□□ -0.58
TPM1-207ENST00000403994 TXN2Q99757 166 aa11.42□□□□□ -0.58
TPM1-207ENST00000403994 OVOL2Q9BRP0 275 aa11.42□□□□□ -0.58
TPM1-207ENST00000403994 NXF2Q9GZY0 626 aaKnown RBP11.42□□□□□ -0.58
TPM1-207ENST00000403994 EPPK1P58107 5090 aaKnown RBP11.41□□□□□ -0.58
TPM1-207ENST00000403994 A0A0G2JRQ6 117 aa11.41□□□□□ -0.58
TPM1-207ENST00000403994 OR4C46A6NHA9 309 aa11.41□□□□□ -0.58
TPM1-207ENST00000403994 INS-IGF2F8WCM5 200 aa11.41□□□□□ -0.58
TPM1-207ENST00000403994 CTDSP2O14595 271 aa11.41□□□□□ -0.58
TPM1-207ENST00000403994 GNG7O60262 68 aa11.41□□□□□ -0.58
TPM1-207ENST00000403994 CTSDP07339 412 aaPredicted RBP11.41□□□□□ -0.58
TPM1-207ENST00000403994 UCP1P25874 307 aa11.41□□□□□ -0.58
TPM1-207ENST00000403994 MRPS10P82664 201 aaKnown RBP11.41□□□□□ -0.58
TPM1-207ENST00000403994 ERHP84090 104 aaKnown RBP11.41□□□□□ -0.58
TPM1-207ENST00000403994 SP6Q3SY56 376 aa11.41□□□□□ -0.58
TPM1-207ENST00000403994 IL17DQ8TAD2 202 aa11.41□□□□□ -0.58
TPM1-207ENST00000403994 RNF2Q99496 336 aa11.41□□□□□ -0.58
TPM1-207ENST00000403994 CCDC59Q9P031 241 aaKnown RBP11.41□□□□□ -0.58
TPM1-207ENST00000403994 SMPXQ9UHP9 88 aa11.41□□□□□ -0.58
TPM1-207ENST00000403994 IGHV3-49A0A0A0MS15 119 aa11.4□□□□□ -0.58
TPM1-207ENST00000403994 CHEK1O14757 476 aa11.4□□□□□ -0.58
TPM1-207ENST00000403994 ATG12O94817 140 aa11.4□□□□□ -0.58
TPM1-207ENST00000403994 YIF1AO95070 293 aa11.4□□□□□ -0.58
TPM1-207ENST00000403994 IFNA17P01571 189 aa11.4□□□□□ -0.58
TPM1-207ENST00000403994 HOXA1P49639 335 aaPredicted RBP11.4□□□□□ -0.58
TPM1-207ENST00000403994 APOC4P55056 127 aa11.4□□□□□ -0.58
TPM1-207ENST00000403994 MEF2DQ14814 521 aa11.4□□□□□ -0.58
TPM1-207ENST00000403994 CLVS1Q8IUQ0 354 aaPredicted RBP11.4□□□□□ -0.58
TPM1-207ENST00000403994 TMEM116Q8NCL8 245 aa11.4□□□□□ -0.58
TPM1-207ENST00000403994 RAB2BQ8WUD1 216 aa11.4□□□□□ -0.58
TPM1-207ENST00000403994 RHPN1-AS1Q9BWJ2 59 aa11.4□□□□□ -0.58
TPM1-207ENST00000403994 B3GALNT1O75752 331 aa11.39□□□□□ -0.59
TPM1-207ENST00000403994 RNASE2P10153 161 aaKnown RBP11.39□□□□□ -0.59
TPM1-207ENST00000403994 SNCAP37840 140 aa11.39□□□□□ -0.59
TPM1-207ENST00000403994 DEFB135Q30KP9 77 aa11.39□□□□□ -0.59
TPM1-207ENST00000403994 PVRIGQ6DKI7 326 aa11.39□□□□□ -0.59
TPM1-207ENST00000403994 OR4C16Q8NGL9 310 aa11.39□□□□□ -0.59
TPM1-207ENST00000403994 RNASE11Q8TAA1 199 aaKnown RBP11.39□□□□□ -0.59
TPM1-207ENST00000403994 DYNC2LI1Q8TCX1 351 aa11.39□□□□□ -0.59
TPM1-207ENST00000403994 PDCD10Q9BUL8 212 aa11.39□□□□□ -0.59
TPM1-207ENST00000403994 TMEM222Q9H0R3 208 aa11.39□□□□□ -0.59
TPM1-207ENST00000403994 ZFAND3Q9H8U3 227 aa11.39□□□□□ -0.59
TPM1-207ENST00000403994 IGHV3OR16-13A0A075B7E8 117 aa11.38□□□□□ -0.59
TPM1-207ENST00000403994 IGHV3-74A0A0B4J1X5 117 aa11.38□□□□□ -0.59
TPM1-207ENST00000403994 OR5AC1P0C628 307 aa11.38□□□□□ -0.59
TPM1-207ENST00000403994 NPBWR1P48145 328 aa11.38□□□□□ -0.59
TPM1-207ENST00000403994 SURF2Q15527 256 aaPredicted RBP11.38□□□□□ -0.59
TPM1-207ENST00000403994 AARDQ4LEZ3 155 aa11.38□□□□□ -0.59
TPM1-207ENST00000403994 LHFPL5Q8TAF8 219 aa11.38□□□□□ -0.59
TPM1-207ENST00000403994 RRNAD1Q96FB5 475 aaKnown RBP11.38□□□□□ -0.59
TPM1-207ENST00000403994 NAA60Q9H7X0 242 aa11.38□□□□□ -0.59
TPM1-207ENST00000403994 C14orf166Q9Y224 244 aaKnown RBP11.38□□□□□ -0.59
TPM1-207ENST00000403994 TP53TG1Q9Y2A0 90 aa11.38□□□□□ -0.59
TPM1-207ENST00000403994 TRAV14DV4A0A0A6YYC5 116 aa11.37□□□□□ -0.59
TPM1-207ENST00000403994 CORTO00230 105 aa11.37□□□□□ -0.59
TPM1-207ENST00000403994 CTDSPLO15194 276 aa11.37□□□□□ -0.59
TPM1-207ENST00000403994 ETV6P41212 452 aa11.37□□□□□ -0.59
TPM1-207ENST00000403994 IL18Q14116 193 aa11.37□□□□□ -0.59
TPM1-207ENST00000403994 BSXQ3C1V8 233 aa11.37□□□□□ -0.59
TPM1-207ENST00000403994 TOMM20LQ6UXN7 152 aa11.37□□□□□ -0.59
TPM1-207ENST00000403994 ZNF600Q6ZNG1 722 aa11.37□□□□□ -0.59
TPM1-207ENST00000403994 Q6ZRM9 215 aa11.37□□□□□ -0.59
TPM1-207ENST00000403994 Q6ZWC4 215 aa11.37□□□□□ -0.59
TPM1-207ENST00000403994 FAM219AQ8IW50 185 aa11.37□□□□□ -0.59
TPM1-207ENST00000403994 DUSP18Q8NEJ0 188 aa11.37□□□□□ -0.59
TPM1-207ENST00000403994 DIRAS2Q96HU8 199 aa11.37□□□□□ -0.59
TPM1-207ENST00000403994 BCL7BQ9BQE9 202 aa11.37□□□□□ -0.59
TPM1-207ENST00000403994 GINS3Q9BRX5 216 aa11.37□□□□□ -0.59
TPM1-207ENST00000403994 RTBDNQ9BSG5 229 aaPredicted RBP11.37□□□□□ -0.59
TPM1-207ENST00000403994 FNDC4Q9H6D8 234 aaPredicted RBP11.37□□□□□ -0.59
TPM1-207ENST00000403994 IGKV3-7A0A075B6H7 116 aa11.36□□□□□ -0.59
TPM1-207ENST00000403994 KIR2DL5BA0A0G2JN68 375 aa11.36□□□□□ -0.59
TPM1-207ENST00000403994 KIR2DL5BA0A0G2JPC4 375 aa11.36□□□□□ -0.59
TPM1-207ENST00000403994 DISC1C4P0D8 188 aa11.36□□□□□ -0.59
TPM1-207ENST00000403994 JTBO76095 146 aa11.36□□□□□ -0.59
TPM1-207ENST00000403994 CDS2O95674 445 aa11.36□□□□□ -0.59
TPM1-207ENST00000403994 AKAIN1P0CW23 69 aa11.36□□□□□ -0.59
TPM1-207ENST00000403994 RPL35AP18077 110 aaKnown RBP11.36□□□□□ -0.59
TPM1-207ENST00000403994 TFPI2P48307 235 aa11.36□□□□□ -0.59
TPM1-207ENST00000403994 SUB1P53999 127 aaKnown RBP eCLIP11.36□□□□□ -0.59
TPM1-207ENST00000403994 TMBIM6P55061 237 aa11.36□□□□□ -0.59
TPM1-207ENST00000403994 ZNF124Q15973 351 aa11.36□□□□□ -0.59
TPM1-207ENST00000403994 FAM90A2PQ658T7 463 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms