RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 CRYBB3P26998 211 aa16.19■□□□□ 0.18
CCDC47-202ENST00000403162 COMPP49747 757 aaPredicted RBP16.19■□□□□ 0.18
CCDC47-202ENST00000403162 PQLC2Q6ZP29 291 aa16.19■□□□□ 0.18
CCDC47-202ENST00000403162 PNKDQ8N490 385 aa16.19■□□□□ 0.18
CCDC47-202ENST00000403162 OR2V2Q96R30 315 aa16.19■□□□□ 0.18
CCDC47-202ENST00000403162 GNB4Q9HAV0 340 aa16.19■□□□□ 0.18
CCDC47-202ENST00000403162 DSCAML1Q8TD84 2053 aa16.19■□□□□ 0.18
CCDC47-202ENST00000403162 KBTBD11-OT1A0A1B0GTJ5 212 aa16.19■□□□□ 0.18
CCDC47-202ENST00000403162 RPLP1P05386 114 aaKnown RBP16.19■□□□□ 0.18
CCDC47-202ENST00000403162 OR10J3Q5JRS4 329 aa16.19■□□□□ 0.18
CCDC47-202ENST00000403162 ZNF503Q96F45 646 aa16.19■□□□□ 0.18
CCDC47-202ENST00000403162 C19orf24Q9BVV8 132 aa16.19■□□□□ 0.18
CCDC47-202ENST00000403162 G0S2P27469 103 aa16.18■□□□□ 0.18
CCDC47-202ENST00000403162 BRS3P32247 399 aa16.18■□□□□ 0.18
CCDC47-202ENST00000403162 MRPS11P82912 194 aaKnown RBP16.18■□□□□ 0.18
CCDC47-202ENST00000403162 PRCDQ00LT1 54 aa16.18■□□□□ 0.18
CCDC47-202ENST00000403162 BHLHA15Q7RTS1 189 aaPredicted RBP16.18■□□□□ 0.18
CCDC47-202ENST00000403162 MOGAT3Q86VF5 341 aa16.18■□□□□ 0.18
CCDC47-202ENST00000403162 SIGLECL1Q8N7X8 197 aa16.18■□□□□ 0.18
CCDC47-202ENST00000403162 ZNF439Q8NDP4 499 aa16.18■□□□□ 0.18
CCDC47-202ENST00000403162 VN1R17PQ8TDU5 208 aa16.18■□□□□ 0.18
CCDC47-202ENST00000403162 HEATR1Q9H583 2144 aaKnown RBP16.18■□□□□ 0.18
CCDC47-202ENST00000403162 PLEKHA3Q9HB20 300 aa16.18■□□□□ 0.18
CCDC47-202ENST00000403162 SLC25A15Q9Y619 301 aa16.18■□□□□ 0.18
CCDC47-202ENST00000403162 ISLRO14498 428 aa16.17■□□□□ 0.18
CCDC47-202ENST00000403162 GPX1P07203 203 aa16.17■□□□□ 0.18
CCDC47-202ENST00000403162 ATP5IP56385 69 aaPredicted RBP16.17■□□□□ 0.18
CCDC47-202ENST00000403162 RTL8BQ17RB0 113 aa16.17■□□□□ 0.18
CCDC47-202ENST00000403162 TIGITQ495A1 244 aa16.17■□□□□ 0.18
CCDC47-202ENST00000403162 SPRNQ5BIV9 151 aa16.17■□□□□ 0.18
CCDC47-202ENST00000403162 TMEM136Q6ZRR5 245 aa16.17■□□□□ 0.18
CCDC47-202ENST00000403162 NAT8BQ9UHF3 227 aa16.17■□□□□ 0.18
CCDC47-202ENST00000403162 PAM16Q9Y3D7 125 aa16.17■□□□□ 0.18
CCDC47-202ENST00000403162 ZGRF1Q86YA3 2104 aa16.17■□□□□ 0.18
CCDC47-202ENST00000403162 J3QR06 171 aa16.17■□□□□ 0.18
CCDC47-202ENST00000403162 OR5G3P0C626 314 aa16.17■□□□□ 0.18
CCDC47-202ENST00000403162 MYOD1P15172 320 aa16.17■□□□□ 0.18
CCDC47-202ENST00000403162 HINT2Q9BX68 163 aa16.17■□□□□ 0.18
CCDC47-202ENST00000403162 FBXL7Q9UJT9 491 aa16.17■□□□□ 0.18
CCDC47-202ENST00000403162 TANC2Q9HCD6 1990 aa16.16■□□□□ 0.18
CCDC47-202ENST00000403162 IGKV1OR2-108A0A075B7D4 117 aa16.16■□□□□ 0.18
CCDC47-202ENST00000403162 ZNF25P17030 456 aaPredicted RBP16.16■□□□□ 0.18
CCDC47-202ENST00000403162 TAS2R45P59539 299 aa16.16■□□□□ 0.18
CCDC47-202ENST00000403162 LYG1Q8N1E2 194 aa16.16■□□□□ 0.18
CCDC47-202ENST00000403162 TMEM68Q96MH6 324 aa16.16■□□□□ 0.18
CCDC47-202ENST00000403162 RNASE7Q9H1E1 156 aaKnown RBP16.16■□□□□ 0.18
CCDC47-202ENST00000403162 ZNF586Q9NXT0 402 aa16.16■□□□□ 0.18
CCDC47-202ENST00000403162 GGTLC3B5MD39 225 aa16.16■□□□□ 0.18
CCDC47-202ENST00000403162 UPK2O00526 184 aa16.16■□□□□ 0.18
CCDC47-202ENST00000403162 IRF2P14316 349 aa16.16■□□□□ 0.18
CCDC47-202ENST00000403162 C2orf83Q53S99 150 aa16.16■□□□□ 0.18
CCDC47-202ENST00000403162 OR4B1Q8NGF8 309 aa16.16■□□□□ 0.18
CCDC47-202ENST00000403162 FAM222BQ8WU58 562 aa16.16■□□□□ 0.18
CCDC47-202ENST00000403162 PROCRQ9UNN8 238 aa16.16■□□□□ 0.18
CCDC47-202ENST00000403162 A0A1W2PRE2 83 aa16.15■□□□□ 0.18
CCDC47-202ENST00000403162 IGLV2-8P01709 118 aa16.15■□□□□ 0.18
CCDC47-202ENST00000403162 Q8N976 141 aa16.15■□□□□ 0.18
CCDC47-202ENST00000403162 STARD4Q96DR4 205 aa16.15■□□□□ 0.18
CCDC47-202ENST00000403162 KCNS1Q96KK3 526 aa16.15■□□□□ 0.18
CCDC47-202ENST00000403162 USP24Q9UPU5 2620 aa16.15■□□□□ 0.18
CCDC47-202ENST00000403162 OR7C2O60412 319 aa16.14■□□□□ 0.17
CCDC47-202ENST00000403162 DSCAMO60469 2012 aa16.14■□□□□ 0.17
CCDC47-202ENST00000403162 CASP6P55212 293 aa16.14■□□□□ 0.17
CCDC47-202ENST00000403162 IGF2BP2-AS1Q96M15 143 aa16.14■□□□□ 0.17
CCDC47-202ENST00000403162 RNF2Q99496 336 aa16.14■□□□□ 0.17
CCDC47-202ENST00000403162 RNF114Q9Y508 228 aa16.14■□□□□ 0.17
CCDC47-202ENST00000403162 SMIM27A0A1W2PRY6 76 aa16.14■□□□□ 0.17
CCDC47-202ENST00000403162 AMY1AP04745 511 aa16.14■□□□□ 0.17
CCDC47-202ENST00000403162 PPOXP50336 477 aa16.14■□□□□ 0.17
CCDC47-202ENST00000403162 MOB3BQ86TA1 216 aa16.14■□□□□ 0.17
CCDC47-202ENST00000403162 TBL2Q9Y4P3 447 aaKnown RBP16.14■□□□□ 0.17
CCDC47-202ENST00000403162 HLA-DQA1P01909 254 aa16.13■□□□□ 0.17
CCDC47-202ENST00000403162 CEACAM8P31997 349 aaPredicted RBP16.13■□□□□ 0.17
CCDC47-202ENST00000403162 KLF3P57682 345 aaPredicted RBP16.13■□□□□ 0.17
CCDC47-202ENST00000403162 GAGE1Q13065 139 aa16.13■□□□□ 0.17
CCDC47-202ENST00000403162 FXYD3Q14802 87 aa16.13■□□□□ 0.17
CCDC47-202ENST00000403162 ITLN1Q8WWA0 313 aa16.13■□□□□ 0.17
CCDC47-202ENST00000403162 LINC00574Q9H8X3 128 aa16.13■□□□□ 0.17
CCDC47-202ENST00000403162 INTS1Q8N201 2190 aaKnown RBP16.13■□□□□ 0.17
CCDC47-202ENST00000403162 GATA4P43694 442 aa16.13■□□□□ 0.17
CCDC47-202ENST00000403162 TMEM30BQ3MIR4 351 aa16.13■□□□□ 0.17
CCDC47-202ENST00000403162 OR1L8Q8NGR8 309 aa16.13■□□□□ 0.17
CCDC47-202ENST00000403162 TMEM208Q9BTX3 173 aa16.13■□□□□ 0.17
CCDC47-202ENST00000403162 CACNA1BQ00975 2339 aa16.12■□□□□ 0.17
CCDC47-202ENST00000403162 TEX50A0A1B0GTY4 177 aa16.12■□□□□ 0.17
CCDC47-202ENST00000403162 DLEU1O43261 78 aa16.12■□□□□ 0.17
CCDC47-202ENST00000403162 C8orf88P0DMB2 117 aa16.12■□□□□ 0.17
CCDC47-202ENST00000403162 KRTDAPP60985 99 aa16.12■□□□□ 0.17
CCDC47-202ENST00000403162 SUMO1P63165 101 aaKnown RBP16.12■□□□□ 0.17
CCDC47-202ENST00000403162 IBA57Q5T440 356 aaKnown RBP16.12■□□□□ 0.17
CCDC47-202ENST00000403162 SLC25A33Q9BSK2 321 aa16.12■□□□□ 0.17
CCDC47-202ENST00000403162 MRPL32Q9BYC8 188 aaKnown RBP16.12■□□□□ 0.17
CCDC47-202ENST00000403162 NRN1Q9NPD7 142 aa16.12■□□□□ 0.17
CCDC47-202ENST00000403162 RP1L1Q8IWN7 2480 aaPredicted RBP16.12■□□□□ 0.17
CCDC47-202ENST00000403162 A0A1W2PS18 150 aa16.11■□□□□ 0.17
CCDC47-202ENST00000403162 DIRC3C9JPN6 131 aa16.11■□□□□ 0.17
CCDC47-202ENST00000403162 REG1AP05451 166 aa16.11■□□□□ 0.17
CCDC47-202ENST00000403162 GATA2P23769 480 aaPredicted RBP16.11■□□□□ 0.17
CCDC47-202ENST00000403162 ZNF83P51522 516 aa16.11■□□□□ 0.17
CCDC47-202ENST00000403162 FAM201AQ5SY85 155 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms