RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 GTF3AQ92664 365 aaKnown RBP7.88□□□□□ -1.15
ATL3-201ENST00000398868 TMEM101Q96IK0 257 aa7.88□□□□□ -1.15
ATL3-201ENST00000398868 VKORC1Q9BQB6 163 aa7.88□□□□□ -1.15
ATL3-201ENST00000398868 TRAV8-1A0A0A6YYK1 113 aa7.87□□□□□ -1.15
ATL3-201ENST00000398868 B9A039 149 aa7.87□□□□□ -1.15
ATL3-201ENST00000398868 RPS11P62280 158 aaKnown RBP eCLIP7.87□□□□□ -1.15
ATL3-201ENST00000398868 TBR1Q16650 682 aa7.87□□□□□ -1.15
ATL3-201ENST00000398868 UNQ6494/PRO21346Q6UXR6 183 aa7.87□□□□□ -1.15
ATL3-201ENST00000398868 C1QL4Q86Z23 238 aa7.87□□□□□ -1.15
ATL3-201ENST00000398868 ASCL2Q99929 193 aa7.87□□□□□ -1.15
ATL3-201ENST00000398868 SPRR3Q9UBC9 169 aa7.87□□□□□ -1.15
ATL3-201ENST00000398868 LOC390937A0A1W2PQ73 354 aa7.87□□□□□ -1.15
ATL3-201ENST00000398868 IL36BQ9NZH7 164 aa7.87□□□□□ -1.15
ATL3-201ENST00000398868 DSPPQ9NZW4 1301 aa7.87□□□□□ -1.15
ATL3-201ENST00000398868 PEX7O00628 323 aa7.87□□□□□ -1.15
ATL3-201ENST00000398868 TDGF1P13385 188 aa7.87□□□□□ -1.15
ATL3-201ENST00000398868 RPRMQ9NS64 109 aa7.87□□□□□ -1.15
ATL3-201ENST00000398868 CD1AP06126 327 aa7.87□□□□□ -1.15
ATL3-201ENST00000398868 GATAD1Q8WUU5 269 aa7.87□□□□□ -1.15
ATL3-201ENST00000398868 MARCH11A6NNE9 402 aa7.87□□□□□ -1.15
ATL3-201ENST00000398868 ZNF585BQ52M93 769 aa7.87□□□□□ -1.15
ATL3-201ENST00000398868 ZFAND6Q6FIF0 208 aa7.87□□□□□ -1.15
ATL3-201ENST00000398868 NACAE9PAV3 2078 aa7.87□□□□□ -1.15
ATL3-201ENST00000398868 TRAV24A0A0B4J272 114 aa7.86□□□□□ -1.15
ATL3-201ENST00000398868 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.86□□□□□ -1.15
ATL3-201ENST00000398868 C8orf88P0DMB2 117 aa7.86□□□□□ -1.15
ATL3-201ENST00000398868 PSG1P11464 419 aa7.86□□□□□ -1.15
ATL3-201ENST00000398868 PPP1R27Q86WC6 154 aa7.86□□□□□ -1.15
ATL3-201ENST00000398868 OR13A1Q8NGR1 328 aa7.86□□□□□ -1.15
ATL3-201ENST00000398868 ZNF703Q9H7S9 590 aaPredicted RBP7.86□□□□□ -1.15
ATL3-201ENST00000398868 NPIPB11E5RHQ5 1161 aa7.86□□□□□ -1.15
ATL3-201ENST00000398868 GNG5P63218 68 aa7.86□□□□□ -1.15
ATL3-201ENST00000398868 VAX1Q5SQQ9 334 aa7.86□□□□□ -1.15
ATL3-201ENST00000398868 KIR2DL4Q99706 377 aa7.86□□□□□ -1.15
ATL3-201ENST00000398868 ZNF257Q9Y2Q1 563 aa7.86□□□□□ -1.15
ATL3-201ENST00000398868 ZNF708P17019 499 aa7.86□□□□□ -1.15
ATL3-201ENST00000398868 SAMD5Q5TGI4 173 aa7.86□□□□□ -1.15
ATL3-201ENST00000398868 C3orf56Q8N813 242 aa7.86□□□□□ -1.15
ATL3-201ENST00000398868 FAM57AQ8TBR7 257 aa7.86□□□□□ -1.15
ATL3-201ENST00000398868 AQP3Q92482 292 aa7.86□□□□□ -1.15
ATL3-201ENST00000398868 MCRIP2Q9BUT9 160 aaKnown RBP7.86□□□□□ -1.15
ATL3-201ENST00000398868 CRIM1Q9NZV1 1036 aa7.86□□□□□ -1.15
ATL3-201ENST00000398868 SBF2Q86WG5 1849 aa7.86□□□□□ -1.15
ATL3-201ENST00000398868 HOXA3O43365 443 aaPredicted RBP7.86□□□□□ -1.15
ATL3-201ENST00000398868 C1QTNF9P0C862 333 aa7.86□□□□□ -1.15
ATL3-201ENST00000398868 C8orf46Q8TAG6 207 aa7.86□□□□□ -1.15
ATL3-201ENST00000398868 NDUFAF3Q9BU61 184 aa7.86□□□□□ -1.15
ATL3-201ENST00000398868 TRAV5A0A0B4J249 113 aa7.86□□□□□ -1.15
ATL3-201ENST00000398868 ABCA1O95477 2261 aa7.86□□□□□ -1.15
ATL3-201ENST00000398868 A0A1W2PR77 199 aa7.86□□□□□ -1.15
ATL3-201ENST00000398868 SLC25A47Q6Q0C1 308 aa7.86□□□□□ -1.15
ATL3-201ENST00000398868 FAM110DQ8TAY7 271 aaPredicted RBP7.86□□□□□ -1.15
ATL3-201ENST00000398868 NEUROG1Q92886 237 aa7.86□□□□□ -1.15
ATL3-201ENST00000398868 C5orf30Q96GV9 206 aa7.86□□□□□ -1.15
ATL3-201ENST00000398868 UMODP07911 640 aa7.85□□□□□ -1.15
ATL3-201ENST00000398868 MRPS18AQ9NVS2 196 aaKnown RBP7.85□□□□□ -1.15
ATL3-201ENST00000398868 DLEC1Q9Y238 1755 aa7.85□□□□□ -1.15
ATL3-201ENST00000398868 HIGD1CA8MV81 97 aa7.85□□□□□ -1.15
ATL3-201ENST00000398868 TMEM187Q14656 261 aa7.85□□□□□ -1.15
ATL3-201ENST00000398868 MRPL20Q9BYC9 149 aaKnown RBP7.85□□□□□ -1.15
ATL3-201ENST00000398868 A0A087X0K7 114 aa7.85□□□□□ -1.15
ATL3-201ENST00000398868 IGHV2OR16-5A0A0B4J2B6 119 aa7.85□□□□□ -1.15
ATL3-201ENST00000398868 DXOO77932 396 aaKnown RBP7.85□□□□□ -1.15
ATL3-201ENST00000398868 Q6ZT83 130 aa7.85□□□□□ -1.15
ATL3-201ENST00000398868 RCC1LQ96I51 464 aaKnown RBP7.85□□□□□ -1.15
ATL3-201ENST00000398868 TRBV9A0A0B4J1U6 114 aa7.85□□□□□ -1.15
ATL3-201ENST00000398868 MALP21145 153 aa7.85□□□□□ -1.15
ATL3-201ENST00000398868 OR10W1Q8NGF6 305 aa7.85□□□□□ -1.15
ATL3-201ENST00000398868 ZNF625Q96I27 306 aaPredicted RBP7.85□□□□□ -1.15
ATL3-201ENST00000398868 MRPS16Q9Y3D3 137 aaKnown RBP7.85□□□□□ -1.15
ATL3-201ENST00000398868 CHCHD2Q9Y6H1 151 aaPredicted RBP7.85□□□□□ -1.15
ATL3-201ENST00000398868 COL5A3P25940 1745 aaPredicted RBP7.85□□□□□ -1.15
ATL3-201ENST00000398868 SRP19P09132 144 aaKnown RBP7.85□□□□□ -1.15
ATL3-201ENST00000398868 MC5RP33032 325 aa7.85□□□□□ -1.15
ATL3-201ENST00000398868 POC1AQ8NBT0 407 aa7.85□□□□□ -1.15
ATL3-201ENST00000398868 COQ2Q96H96 371 aa7.85□□□□□ -1.15
ATL3-201ENST00000398868 IGFBP2P18065 325 aa7.85□□□□□ -1.15
ATL3-201ENST00000398868 GTSCR1Q86UQ5 136 aa7.85□□□□□ -1.15
ATL3-201ENST00000398868 UBE2E2Q96LR5 201 aa7.85□□□□□ -1.15
ATL3-201ENST00000398868 RNF223E7ERA6 249 aa7.84□□□□□ -1.15
ATL3-201ENST00000398868 GZMMP51124 257 aa7.84□□□□□ -1.15
ATL3-201ENST00000398868 NDPQ00604 133 aa7.84□□□□□ -1.15
ATL3-201ENST00000398868 SLC25A28Q96A46 364 aa7.84□□□□□ -1.15
ATL3-201ENST00000398868 GREM1O60565 184 aa7.84□□□□□ -1.15
ATL3-201ENST00000398868 GLRX5Q86SX6 157 aa7.84□□□□□ -1.15
ATL3-201ENST00000398868 NFAM1Q8NET5 270 aaPredicted RBP7.84□□□□□ -1.15
ATL3-201ENST00000398868 OR9G1Q8NH87 305 aa7.84□□□□□ -1.15
ATL3-201ENST00000398868 ZNF407Q9C0G0 2248 aa7.84□□□□□ -1.15
ATL3-201ENST00000398868 FREM3P0C091 2139 aa7.84□□□□□ -1.15
ATL3-201ENST00000398868 hDV102S1A0JD36 115 aa7.84□□□□□ -1.15
ATL3-201ENST00000398868 PIN1P1O15428 100 aa7.84□□□□□ -1.15
ATL3-201ENST00000398868 ZNF562Q6V9R5 426 aa7.84□□□□□ -1.15
ATL3-201ENST00000398868 ACACAQ13085 2346 aa7.84□□□□□ -1.15
ATL3-201ENST00000398868 HIST1H2BKO60814 126 aa7.84□□□□□ -1.15
ATL3-201ENST00000398868 EFEMP2O95967 443 aa7.84□□□□□ -1.15
ATL3-201ENST00000398868 HIST1H2BJP06899 126 aa7.84□□□□□ -1.15
ATL3-201ENST00000398868 SELLP14151 372 aa7.84□□□□□ -1.15
ATL3-201ENST00000398868 HIST1H2BOP23527 126 aa7.84□□□□□ -1.15
ATL3-201ENST00000398868 HIST1H2BBP33778 126 aa7.84□□□□□ -1.15
ATL3-201ENST00000398868 HIST1H2BDP58876 126 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms