RNA–Protein interactions for RNA: ENST00000398568.6

CYLD-202, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYLD, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-202ENST00000398568 ANKRD37Q7Z713 158 aa12.42□□□□□ -0.42
CYLD-202ENST00000398568 NANOS1Q8WY41 292 aaKnown RBP12.42□□□□□ -0.42
CYLD-202ENST00000398568 MCRIP2Q9BUT9 160 aaKnown RBP12.42□□□□□ -0.42
CYLD-202ENST00000398568 FGF23Q9GZV9 251 aaPredicted RBP12.42□□□□□ -0.42
CYLD-202ENST00000398568 PSMB11A5LHX3 300 aa12.42□□□□□ -0.42
CYLD-202ENST00000398568 KIR3DS1Q14943 382 aa12.42□□□□□ -0.42
CYLD-202ENST00000398568 CEACAM16Q2WEN9 425 aa12.42□□□□□ -0.42
CYLD-202ENST00000398568 TRAT1Q6PIZ9 186 aa12.42□□□□□ -0.42
CYLD-202ENST00000398568 NUP35Q8NFH5 326 aa12.42□□□□□ -0.42
CYLD-202ENST00000398568 FAM168AQ92567 244 aa12.42□□□□□ -0.42
CYLD-202ENST00000398568 DUSP13Q9UII6 198 aa12.42□□□□□ -0.42
CYLD-202ENST00000398568 HILPDAQ9Y5L2 63 aa12.42□□□□□ -0.42
CYLD-202ENST00000398568 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.41□□□□□ -0.42
CYLD-202ENST00000398568 FOXA3P55318 350 aaPredicted RBP12.41□□□□□ -0.42
CYLD-202ENST00000398568 WIPI1Q5MNZ9 446 aaPredicted RBP12.41□□□□□ -0.42
CYLD-202ENST00000398568 FA2HQ7L5A8 372 aa12.41□□□□□ -0.42
CYLD-202ENST00000398568 GRAMD2BQ96HH9 432 aa12.41□□□□□ -0.42
CYLD-202ENST00000398568 C1QTNF5Q9BXJ0 243 aa12.41□□□□□ -0.42
CYLD-202ENST00000398568 CFAP47Q6ZTR5 3102 aa12.41□□□□□ -0.42
CYLD-202ENST00000398568 KRTAP27-1Q3LI81 207 aa12.41□□□□□ -0.42
CYLD-202ENST00000398568 GDF5OSQ5U4N7 250 aa12.41□□□□□ -0.42
CYLD-202ENST00000398568 TEPPQ6URK8 271 aa12.41□□□□□ -0.42
CYLD-202ENST00000398568 MIR17HGQ75NE6 70 aa12.41□□□□□ -0.42
CYLD-202ENST00000398568 OR4A16Q8NH70 328 aa12.41□□□□□ -0.42
CYLD-202ENST00000398568 FGFBP3Q8TAT2 258 aa12.41□□□□□ -0.42
CYLD-202ENST00000398568 PRDM14Q9GZV8 571 aa12.41□□□□□ -0.42
CYLD-202ENST00000398568 CHRNA10Q9GZZ6 450 aa12.41□□□□□ -0.42
CYLD-202ENST00000398568 ZNF835Q9Y2P0 537 aa12.41□□□□□ -0.42
CYLD-202ENST00000398568 PPIAL4EA0A075B759 164 aa12.41□□□□□ -0.42
CYLD-202ENST00000398568 A0A1W2PRE2 83 aa12.41□□□□□ -0.42
CYLD-202ENST00000398568 PPIAL4FP0DN26 164 aa12.41□□□□□ -0.42
CYLD-202ENST00000398568 MC5RP33032 325 aa12.41□□□□□ -0.42
CYLD-202ENST00000398568 TPRX1Q8N7U7 411 aa12.41□□□□□ -0.42
CYLD-202ENST00000398568 NFAM1Q8NET5 270 aaPredicted RBP12.41□□□□□ -0.42
CYLD-202ENST00000398568 RNF138Q8WVD3 245 aa12.41□□□□□ -0.42
CYLD-202ENST00000398568 TRAV26-1A0A087WT03 109 aa12.4□□□□□ -0.42
CYLD-202ENST00000398568 TEX48A0A1B0GUV7 120 aa12.4□□□□□ -0.42
CYLD-202ENST00000398568 FAM120AOSQ5T036 256 aa12.4□□□□□ -0.42
CYLD-202ENST00000398568 COL5A1P20908 1838 aaPredicted RBP12.4□□□□□ -0.42
CYLD-202ENST00000398568 IGF2RP11717 2491 aa12.4□□□□□ -0.42
CYLD-202ENST00000398568 F2RL2O00254 374 aa12.4□□□□□ -0.42
CYLD-202ENST00000398568 FTH1P19P0C7X4 201 aa12.4□□□□□ -0.42
CYLD-202ENST00000398568 CD59P13987 128 aa12.4□□□□□ -0.42
CYLD-202ENST00000398568 MEF2CQ06413 473 aaPredicted RBP12.4□□□□□ -0.42
CYLD-202ENST00000398568 CD300EQ496F6 205 aaPredicted RBP12.4□□□□□ -0.42
CYLD-202ENST00000398568 PRAMEF5Q5TYX0 476 aa12.4□□□□□ -0.42
CYLD-202ENST00000398568 PRAMEF6Q5VXH4 476 aa12.4□□□□□ -0.42
CYLD-202ENST00000398568 C2orf91Q6ZV80 131 aa12.4□□□□□ -0.42
CYLD-202ENST00000398568 ZNF257Q9Y2Q1 563 aa12.4□□□□□ -0.42
CYLD-202ENST00000398568 PCDH15Q96QU1 1955 aa12.4□□□□□ -0.42
CYLD-202ENST00000398568 GAGE12HA6NDE8 117 aa12.4□□□□□ -0.43
CYLD-202ENST00000398568 C21orf140B9A014 251 aa12.4□□□□□ -0.43
CYLD-202ENST00000398568 ZIC3O60481 467 aa12.4□□□□□ -0.43
CYLD-202ENST00000398568 CEACAM3P40198 252 aa12.4□□□□□ -0.43
CYLD-202ENST00000398568 ZNF788Q6ZQV5 615 aa12.4□□□□□ -0.43
CYLD-202ENST00000398568 OR52E5Q8NH55 327 aa12.4□□□□□ -0.43
CYLD-202ENST00000398568 H1FXQ92522 213 aaKnown RBP12.4□□□□□ -0.43
CYLD-202ENST00000398568 PLSCR4Q9NRQ2 329 aa12.4□□□□□ -0.43
CYLD-202ENST00000398568 SLC25A10Q9UBX3 287 aaPredicted RBP12.4□□□□□ -0.43
CYLD-202ENST00000398568 TSSC4Q9Y5U2 329 aaPredicted RBP12.4□□□□□ -0.43
CYLD-202ENST00000398568 C3orf80F5H4A9 247 aa12.39□□□□□ -0.43
CYLD-202ENST00000398568 CRYBA4P53673 196 aa12.39□□□□□ -0.43
CYLD-202ENST00000398568 AESQ08117 197 aa12.39□□□□□ -0.43
CYLD-202ENST00000398568 PEAR1Q5VY43 1037 aaPredicted RBP12.39□□□□□ -0.43
CYLD-202ENST00000398568 BHLHA15Q7RTS1 189 aaPredicted RBP12.39□□□□□ -0.43
CYLD-202ENST00000398568 SPACA9Q96E40 222 aaPredicted RBP12.39□□□□□ -0.43
CYLD-202ENST00000398568 C5orf30Q96GV9 206 aa12.39□□□□□ -0.43
CYLD-202ENST00000398568 MAP1BP46821 2468 aaKnown RBP12.39□□□□□ -0.43
CYLD-202ENST00000398568 DMXL2Q8TDJ6 3036 aa12.39□□□□□ -0.43
CYLD-202ENST00000398568 A0A1W2PPM0 123 aa12.39□□□□□ -0.43
CYLD-202ENST00000398568 CCL7P80098 99 aa12.39□□□□□ -0.43
CYLD-202ENST00000398568 DHRS13Q6UX07 377 aa12.39□□□□□ -0.43
CYLD-202ENST00000398568 FADS6Q8N9I5 356 aa12.39□□□□□ -0.43
CYLD-202ENST00000398568 GALMQ96C23 342 aa12.39□□□□□ -0.43
CYLD-202ENST00000398568 HSD17B10Q99714 261 aaKnown RBP12.39□□□□□ -0.43
CYLD-202ENST00000398568 ANKRD30BLA7E2S9 258 aa12.38□□□□□ -0.43
CYLD-202ENST00000398568 IGLV2-8P01709 118 aa12.38□□□□□ -0.43
CYLD-202ENST00000398568 URB1-AS1Q96HZ7 61 aa12.38□□□□□ -0.43
CYLD-202ENST00000398568 DEFB126Q9BYW3 111 aa12.38□□□□□ -0.43
CYLD-202ENST00000398568 ZNF497Q6ZNH5 498 aa12.38□□□□□ -0.43
CYLD-202ENST00000398568 STXBP6Q8NFX7 210 aa12.38□□□□□ -0.43
CYLD-202ENST00000398568 HIGD1CA8MV81 97 aa12.38□□□□□ -0.43
CYLD-202ENST00000398568 ZNHIT1O43257 154 aa12.38□□□□□ -0.43
CYLD-202ENST00000398568 ADH4P08319 380 aa12.38□□□□□ -0.43
CYLD-202ENST00000398568 TAS2R45P59539 299 aa12.38□□□□□ -0.43
CYLD-202ENST00000398568 GNG3P63215 75 aa12.38□□□□□ -0.43
CYLD-202ENST00000398568 ABHD12Q8N2K0 398 aa12.38□□□□□ -0.43
CYLD-202ENST00000398568 K7EQM0 130 aa12.37□□□□□ -0.43
CYLD-202ENST00000398568 A0A0J9YW62 118 aa12.37□□□□□ -0.43
CYLD-202ENST00000398568 ATP5L2Q7Z4Y8 100 aa12.37□□□□□ -0.43
CYLD-202ENST00000398568 SNRNP40Q96DI7 357 aaKnown RBP12.37□□□□□ -0.43
CYLD-202ENST00000398568 ACACAQ13085 2346 aa12.37□□□□□ -0.43
CYLD-202ENST00000398568 FBLL1A6NHQ2 334 aaKnown RBP12.37□□□□□ -0.43
CYLD-202ENST00000398568 PRR31Q5SQ13 230 aa12.37□□□□□ -0.43
CYLD-202ENST00000398568 ASPHD1Q5U4P2 390 aa12.37□□□□□ -0.43
CYLD-202ENST00000398568 SLC35E4Q6ICL7 350 aa12.37□□□□□ -0.43
CYLD-202ENST00000398568 ADTRPQ96IZ2 230 aa12.37□□□□□ -0.43
CYLD-202ENST00000398568 RABAC1Q9UI14 185 aa12.37□□□□□ -0.43
CYLD-202ENST00000398568 C5orf49A4QMS7 147 aa12.36□□□□□ -0.43
CYLD-202ENST00000398568 OR2H2O95918 312 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms