RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 KIR3DL3Q8N743 410 aa11.33□□□□□ -0.6
NUP98-204ENST00000397004 OR4S2Q8NH73 311 aa11.33□□□□□ -0.6
NUP98-204ENST00000397004 SLC25A2Q9BXI2 301 aa11.33□□□□□ -0.6
NUP98-204ENST00000397004 ZNF71Q9NQZ8 489 aaPredicted RBP11.33□□□□□ -0.6
NUP98-204ENST00000397004 A0A1W2PN81 502 aa11.32□□□□□ -0.6
NUP98-204ENST00000397004 AMTP48728 403 aa11.32□□□□□ -0.6
NUP98-204ENST00000397004 LYG1Q8N1E2 194 aa11.32□□□□□ -0.6
NUP98-204ENST00000397004 SIGLECL1Q8N7X8 197 aa11.32□□□□□ -0.6
NUP98-204ENST00000397004 OR2T6Q8NHC8 308 aa11.32□□□□□ -0.6
NUP98-204ENST00000397004 TEX50A0A1B0GTY4 177 aa11.32□□□□□ -0.6
NUP98-204ENST00000397004 IGLC2P0DOY2 106 aa11.32□□□□□ -0.6
NUP98-204ENST00000397004 IGLC3P0DOY3 106 aa11.32□□□□□ -0.6
NUP98-204ENST00000397004 DMRTA1Q5VZB9 504 aa11.32□□□□□ -0.6
NUP98-204ENST00000397004 KCNS1Q96KK3 526 aa11.32□□□□□ -0.6
NUP98-204ENST00000397004 IL19Q9UHD0 177 aa11.32□□□□□ -0.6
NUP98-204ENST00000397004 M0QZK8 103 aa11.32□□□□□ -0.6
NUP98-204ENST00000397004 SPATA45Q537H7 98 aa11.32□□□□□ -0.6
NUP98-204ENST00000397004 TRAT1Q6PIZ9 186 aa11.32□□□□□ -0.6
NUP98-204ENST00000397004 OSTCQ9NRP0 149 aa11.32□□□□□ -0.6
NUP98-204ENST00000397004 MRPL36Q9P0J6 103 aaKnown RBP11.32□□□□□ -0.6
NUP98-204ENST00000397004 SLC25A10Q9UBX3 287 aaPredicted RBP11.32□□□□□ -0.6
NUP98-204ENST00000397004 J3QR06 171 aa11.31□□□□□ -0.6
NUP98-204ENST00000397004 OR7C2O60412 319 aa11.31□□□□□ -0.6
NUP98-204ENST00000397004 FSTL3O95633 263 aa11.31□□□□□ -0.6
NUP98-204ENST00000397004 STARD4Q96DR4 205 aa11.31□□□□□ -0.6
NUP98-204ENST00000397004 SLC25A33Q9BSK2 321 aa11.31□□□□□ -0.6
NUP98-204ENST00000397004 CGB1A6NKQ9 187 aa11.31□□□□□ -0.6
NUP98-204ENST00000397004 ISLRO14498 428 aa11.31□□□□□ -0.6
NUP98-204ENST00000397004 NKX2-8O15522 239 aa11.31□□□□□ -0.6
NUP98-204ENST00000397004 ZNF253O75346 499 aa11.31□□□□□ -0.6
NUP98-204ENST00000397004 ZNF324O75467 553 aaPredicted RBP11.31□□□□□ -0.6
NUP98-204ENST00000397004 OR5G3P0C626 314 aa11.31□□□□□ -0.6
NUP98-204ENST00000397004 PYYP10082 97 aa11.31□□□□□ -0.6
NUP98-204ENST00000397004 PPOXP50336 477 aa11.31□□□□□ -0.6
NUP98-204ENST00000397004 SPACA3Q8IXA5 215 aa11.31□□□□□ -0.6
NUP98-204ENST00000397004 FDCSPQ8NFU4 85 aa11.31□□□□□ -0.6
NUP98-204ENST00000397004 URB1-AS1Q96HZ7 61 aa11.31□□□□□ -0.6
NUP98-204ENST00000397004 RNF2Q99496 336 aa11.31□□□□□ -0.6
NUP98-204ENST00000397004 ROS1P08922 2347 aa11.31□□□□□ -0.6
NUP98-204ENST00000397004 TRAV34A0A0B4J273 112 aa11.31□□□□□ -0.6
NUP98-204ENST00000397004 KBTBD11-OT1A0A1B0GTJ5 212 aa11.31□□□□□ -0.6
NUP98-204ENST00000397004 CFHR2P36980 270 aa11.31□□□□□ -0.6
NUP98-204ENST00000397004 RPRMLQ8N4K4 120 aa11.31□□□□□ -0.6
NUP98-204ENST00000397004 C18orf32Q8TCD1 76 aa11.31□□□□□ -0.6
NUP98-204ENST00000397004 MBD6Q96DN6 1003 aa11.31□□□□□ -0.6
NUP98-204ENST00000397004 CLEC7AQ9BXN2 247 aa11.31□□□□□ -0.6
NUP98-204ENST00000397004 CORTO00230 105 aa11.3□□□□□ -0.6
NUP98-204ENST00000397004 SPRY3O43610 288 aa11.3□□□□□ -0.6
NUP98-204ENST00000397004 RNASE2P10153 161 aaKnown RBP11.3□□□□□ -0.6
NUP98-204ENST00000397004 CD24P25063 80 aa11.3□□□□□ -0.6
NUP98-204ENST00000397004 OR10J3Q5JRS4 329 aa11.3□□□□□ -0.6
NUP98-204ENST00000397004 Q71RC1 249 aaPredicted RBP11.3□□□□□ -0.6
NUP98-204ENST00000397004 ITLN1Q8WWA0 313 aa11.3□□□□□ -0.6
NUP98-204ENST00000397004 RND1Q92730 232 aa11.3□□□□□ -0.6
NUP98-204ENST00000397004 FER1L6-AS2Q96M78 137 aa11.3□□□□□ -0.6
NUP98-204ENST00000397004 RBM14Q96PK6 669 aaKnown RBP11.3□□□□□ -0.6
NUP98-204ENST00000397004 SLC25A15Q9Y619 301 aa11.3□□□□□ -0.6
NUP98-204ENST00000397004 PRCDQ00LT1 54 aa11.3□□□□□ -0.6
NUP98-204ENST00000397004 IBA57Q5T440 356 aaKnown RBP11.3□□□□□ -0.6
NUP98-204ENST00000397004 PATE2Q6UY27 113 aa11.3□□□□□ -0.6
NUP98-204ENST00000397004 PLSCR4Q9NRQ2 329 aa11.3□□□□□ -0.6
NUP98-204ENST00000397004 A8MXE2 369 aa11.3□□□□□ -0.6
NUP98-204ENST00000397004 MGST1P10620 155 aaKnown RBP11.3□□□□□ -0.6
NUP98-204ENST00000397004 GPR6P46095 362 aaPredicted RBP11.3□□□□□ -0.6
NUP98-204ENST00000397004 TNXAQ16473 311 aa11.3□□□□□ -0.6
NUP98-204ENST00000397004 POU2AF1Q16633 256 aa11.3□□□□□ -0.6
NUP98-204ENST00000397004 TMEM164Q5U3C3 297 aa11.3□□□□□ -0.6
NUP98-204ENST00000397004 EBLN2Q6P2I7 272 aa11.3□□□□□ -0.6
NUP98-204ENST00000397004 MRPL52Q86TS9 123 aaKnown RBP11.3□□□□□ -0.6
NUP98-204ENST00000397004 PNKDQ8N490 385 aa11.3□□□□□ -0.6
NUP98-204ENST00000397004 TRBV9A0A0B4J1U6 114 aa11.29□□□□□ -0.6
NUP98-204ENST00000397004 UPK2O00526 184 aa11.29□□□□□ -0.6
NUP98-204ENST00000397004 HES3Q5TGS1 186 aa11.29□□□□□ -0.6
NUP98-204ENST00000397004 FAM216BQ8N7L0 139 aa11.29□□□□□ -0.6
NUP98-204ENST00000397004 SSBP4Q9BWG4 385 aaPredicted RBP11.29□□□□□ -0.6
NUP98-204ENST00000397004 ZNF355PQ9NSJ1 428 aa11.29□□□□□ -0.6
NUP98-204ENST00000397004 RAB7AP51149 207 aa11.29□□□□□ -0.6
NUP98-204ENST00000397004 PRRX1P54821 245 aa11.29□□□□□ -0.6
NUP98-204ENST00000397004 VHLLQ6RSH7 139 aa11.29□□□□□ -0.6
NUP98-204ENST00000397004 DEFB108BQ8NET1 73 aa11.29□□□□□ -0.6
NUP98-204ENST00000397004 FNDC4Q9H6D8 234 aaPredicted RBP11.29□□□□□ -0.6
NUP98-204ENST00000397004 C7orf69Q9H7B7 122 aa11.29□□□□□ -0.6
NUP98-204ENST00000397004 GCM1Q9NP62 436 aa11.29□□□□□ -0.6
NUP98-204ENST00000397004 AKAP13Q12802 2813 aa11.29□□□□□ -0.6
NUP98-204ENST00000397004 DIAPH2-AS1Q14236 149 aa11.29□□□□□ -0.6
NUP98-204ENST00000397004 SGK494Q96LW2 274 aa11.29□□□□□ -0.6
NUP98-204ENST00000397004 RP1L1Q8IWN7 2480 aaPredicted RBP11.29□□□□□ -0.6
NUP98-204ENST00000397004 AMY1AP04745 511 aa11.29□□□□□ -0.6
NUP98-204ENST00000397004 SAA1P0DJI8 122 aaPredicted RBP11.29□□□□□ -0.6
NUP98-204ENST00000397004 LINC00322Q6ZN03 302 aaPredicted RBP11.29□□□□□ -0.6
NUP98-204ENST00000397004 C10orf55Q5SWW7 151 aa11.28□□□□□ -0.6
NUP98-204ENST00000397004 C1orf162Q8NEQ5 155 aaPredicted RBP11.28□□□□□ -0.6
NUP98-204ENST00000397004 OR4B1Q8NGF8 309 aa11.28□□□□□ -0.6
NUP98-204ENST00000397004 ARL2-SNX15V9GYD0 113 aa11.28□□□□□ -0.6
NUP98-204ENST00000397004 IGKV1D-37A0A075B6S9 117 aa11.28□□□□□ -0.6
NUP98-204ENST00000397004 DPRXA6NFQ7 191 aa11.28□□□□□ -0.6
NUP98-204ENST00000397004 SFTPCP11686 197 aa11.28□□□□□ -0.6
NUP98-204ENST00000397004 CHRNB4P30926 498 aa11.28□□□□□ -0.6
NUP98-204ENST00000397004 CCL11P51671 97 aa11.28□□□□□ -0.6
NUP98-204ENST00000397004 TMEM178AQ8NBL3 297 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms