RNA–Protein interactions for RNA: ENST00000396914.3

CHCHD4-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD4, Length 1,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-202ENST00000396914 PLET1Q6UQ28 207 aa22.6■■□□□ 1.21
CHCHD4-202ENST00000396914 VN1R17PQ8TDU5 208 aa22.6■■□□□ 1.21
CHCHD4-202ENST00000396914 ZNF431Q8TF32 576 aaPredicted RBP22.6■■□□□ 1.21
CHCHD4-202ENST00000396914 CCDC140Q96MF4 163 aa22.6■■□□□ 1.21
CHCHD4-202ENST00000396914 RBKSQ9H477 322 aa22.6■■□□□ 1.21
CHCHD4-202ENST00000396914 HSPB7Q9UBY9 170 aa22.6■■□□□ 1.21
CHCHD4-202ENST00000396914 SLC25A6P12236 298 aa22.59■■□□□ 1.21
CHCHD4-202ENST00000396914 ARL3P36405 182 aa22.59■■□□□ 1.21
CHCHD4-202ENST00000396914 DUSP18Q8NEJ0 188 aa22.59■■□□□ 1.21
CHCHD4-202ENST00000396914 ZC4H2Q9NQZ6 224 aa22.59■■□□□ 1.21
CHCHD4-202ENST00000396914 CMYA5Q8N3K9 4069 aa22.58■■□□□ 1.21
CHCHD4-202ENST00000396914 SEC14L6B5MCN3 397 aa22.58■■□□□ 1.21
CHCHD4-202ENST00000396914 BMPR1BO00238 502 aa22.58■■□□□ 1.21
CHCHD4-202ENST00000396914 CLEC3BP05452 202 aa22.58■■□□□ 1.21
CHCHD4-202ENST00000396914 RNASE2P10153 161 aaKnown RBP22.58■■□□□ 1.21
CHCHD4-202ENST00000396914 HTR2BP41595 481 aa22.58■■□□□ 1.21
CHCHD4-202ENST00000396914 UBAC2Q8NBM4 344 aa22.58■■□□□ 1.21
CHCHD4-202ENST00000396914 DTD1Q8TEA8 209 aa22.58■■□□□ 1.21
CHCHD4-202ENST00000396914 GPR183P32249 361 aa22.57■■□□□ 1.2
CHCHD4-202ENST00000396914 TATDN3Q17R31 274 aa22.57■■□□□ 1.2
CHCHD4-202ENST00000396914 ZNF502Q8TBZ5 544 aa22.57■■□□□ 1.2
CHCHD4-202ENST00000396914 SCARB1Q8WTV0 552 aa22.57■■□□□ 1.2
CHCHD4-202ENST00000396914 GPR61Q9BZJ8 451 aa22.57■■□□□ 1.2
CHCHD4-202ENST00000396914 C21orf62Q9NYP8 219 aa22.57■■□□□ 1.2
CHCHD4-202ENST00000396914 GGCTO75223 188 aaKnown RBP22.57■■□□□ 1.2
CHCHD4-202ENST00000396914 SYNJ2BPP57105 145 aa22.57■■□□□ 1.2
CHCHD4-202ENST00000396914 Q56UQ5 140 aa22.57■■□□□ 1.2
CHCHD4-202ENST00000396914 SAMD5Q5TGI4 173 aa22.57■■□□□ 1.2
CHCHD4-202ENST00000396914 MPTX1A8MV57 137 aa22.56■■□□□ 1.2
CHCHD4-202ENST00000396914 K7EIM0 57 aa22.56■■□□□ 1.2
CHCHD4-202ENST00000396914 PITX3O75364 302 aa22.56■■□□□ 1.2
CHCHD4-202ENST00000396914 MT-CO2P00403 227 aa22.56■■□□□ 1.2
CHCHD4-202ENST00000396914 C11orf87Q6NUJ2 197 aa22.56■■□□□ 1.2
CHCHD4-202ENST00000396914 C12orf45Q8N5I9 185 aaPredicted RBP22.56■■□□□ 1.2
CHCHD4-202ENST00000396914 SLC24A4Q8NFF2 622 aa22.56■■□□□ 1.2
CHCHD4-202ENST00000396914 GPN1Q9HCN4 374 aaPredicted RBP22.56■■□□□ 1.2
CHCHD4-202ENST00000396914 INMT-MINDY4F8WBC2 141 aa22.55■■□□□ 1.2
CHCHD4-202ENST00000396914 MED6O75586 246 aa22.55■■□□□ 1.2
CHCHD4-202ENST00000396914 OR2C1O95371 312 aa22.55■■□□□ 1.2
CHCHD4-202ENST00000396914 IFNA10P01566 189 aa22.55■■□□□ 1.2
CHCHD4-202ENST00000396914 IGHV3-48P01763 117 aa22.55■■□□□ 1.2
CHCHD4-202ENST00000396914 MAGT1Q9H0U3 335 aa22.55■■□□□ 1.2
CHCHD4-202ENST00000396914 FBN3Q75N90 2809 aa22.54■■□□□ 1.2
CHCHD4-202ENST00000396914 OR2T8A6NH00 312 aa22.54■■□□□ 1.2
CHCHD4-202ENST00000396914 FAM25EA8MYX2 175 aa22.54■■□□□ 1.2
CHCHD4-202ENST00000396914 CORTO00230 105 aa22.54■■□□□ 1.2
CHCHD4-202ENST00000396914 KLF5Q13887 457 aaPredicted RBP22.54■■□□□ 1.2
CHCHD4-202ENST00000396914 C9orf66Q5T8R8 295 aa22.54■■□□□ 1.2
CHCHD4-202ENST00000396914 FAM90A26D6RGX4 464 aa22.53■■□□□ 1.2
CHCHD4-202ENST00000396914 I3L2K1 104 aa22.53■■□□□ 1.2
CHCHD4-202ENST00000396914 IL5P05113 134 aa22.53■■□□□ 1.2
CHCHD4-202ENST00000396914 IAPPP10997 89 aa22.53■■□□□ 1.2
CHCHD4-202ENST00000396914 IAH1Q2TAA2 248 aaPredicted RBP22.53■■□□□ 1.2
CHCHD4-202ENST00000396914 ELOVL1Q9BW60 279 aa22.53■■□□□ 1.2
CHCHD4-202ENST00000396914 GSKIPQ9P0R6 139 aa22.53■■□□□ 1.2
CHCHD4-202ENST00000396914 CCSO14618 274 aa22.52■■□□□ 1.2
CHCHD4-202ENST00000396914 SAP30O75446 220 aa22.52■■□□□ 1.2
CHCHD4-202ENST00000396914 NPY1RP25929 384 aa22.52■■□□□ 1.2
CHCHD4-202ENST00000396914 OPRK1P41145 380 aa22.52■■□□□ 1.2
CHCHD4-202ENST00000396914 MFAP4P55083 255 aa22.52■■□□□ 1.2
CHCHD4-202ENST00000396914 ACSM6Q6P461 480 aa22.52■■□□□ 1.2
CHCHD4-202ENST00000396914 SCGB1D2O95969 90 aa22.51■■□□□ 1.19
CHCHD4-202ENST00000396914 BSXQ3C1V8 233 aa22.51■■□□□ 1.19
CHCHD4-202ENST00000396914 NOXA1Q86UR1 476 aa22.51■■□□□ 1.19
CHCHD4-202ENST00000396914 U3KQ87 197 aa22.51■■□□□ 1.19
CHCHD4-202ENST00000396914 C5orf51A6NDU8 294 aa22.5■■□□□ 1.19
CHCHD4-202ENST00000396914 WRBO00258 174 aa22.5■■□□□ 1.19
CHCHD4-202ENST00000396914 TGOLN2O43493 480 aa22.5■■□□□ 1.19
CHCHD4-202ENST00000396914 C2orf83Q53S99 150 aa22.5■■□□□ 1.19
CHCHD4-202ENST00000396914 BSCL2Q96G97 398 aaPredicted RBP22.5■■□□□ 1.19
CHCHD4-202ENST00000396914 OR10C1Q96KK4 312 aa22.5■■□□□ 1.19
CHCHD4-202ENST00000396914 OR4C12Q96R67 309 aa22.5■■□□□ 1.19
CHCHD4-202ENST00000396914 GAR1Q9NY12 217 aaKnown RBP22.5■■□□□ 1.19
CHCHD4-202ENST00000396914 PAIP2BQ9ULR5 123 aaKnown RBP22.5■■□□□ 1.19
CHCHD4-202ENST00000396914 IGHV3-35A0A0C4DH35 117 aa22.49■■□□□ 1.19
CHCHD4-202ENST00000396914 ZNF320A2RRD8 509 aa22.49■■□□□ 1.19
CHCHD4-202ENST00000396914 SYNGR2O43760 224 aa22.49■■□□□ 1.19
CHCHD4-202ENST00000396914 PRAF2O60831 178 aa22.49■■□□□ 1.19
CHCHD4-202ENST00000396914 SPNP16150 400 aa22.49■■□□□ 1.19
CHCHD4-202ENST00000396914 NKX2-1P43699 371 aaPredicted RBP22.49■■□□□ 1.19
CHCHD4-202ENST00000396914 OR9G4Q8NGQ1 327 aa22.49■■□□□ 1.19
CHCHD4-202ENST00000396914 MARVELD1Q9BSK0 173 aa22.49■■□□□ 1.19
CHCHD4-202ENST00000396914 NOTCH3Q9UM47 2321 aa22.49■■□□□ 1.19
CHCHD4-202ENST00000396914 BEAN1Q3B7T3 259 aa22.48■■□□□ 1.19
CHCHD4-202ENST00000396914 FAM106AQ4KMX7 169 aa22.48■■□□□ 1.19
CHCHD4-202ENST00000396914 CIB3Q96Q77 187 aaPredicted RBP22.48■■□□□ 1.19
CHCHD4-202ENST00000396914 GNG7O60262 68 aa22.48■■□□□ 1.19
CHCHD4-202ENST00000396914 PVRIGQ6DKI7 326 aa22.48■■□□□ 1.19
CHCHD4-202ENST00000396914 ZBTB8BQ8NAP8 495 aaPredicted RBP22.48■■□□□ 1.19
CHCHD4-202ENST00000396914 PEMTQ9UBM1 199 aa22.48■■□□□ 1.19
CHCHD4-202ENST00000396914 RPS10-NUDT3A0A1W2PQS6 291 aa22.47■■□□□ 1.19
CHCHD4-202ENST00000396914 IFNA4P05014 189 aa22.47■■□□□ 1.19
CHCHD4-202ENST00000396914 SPSB3Q6PJ21 355 aa22.47■■□□□ 1.19
CHCHD4-202ENST00000396914 OR4D5Q8NGN0 318 aa22.47■■□□□ 1.19
CHCHD4-202ENST00000396914 TXN2Q99757 166 aa22.47■■□□□ 1.19
CHCHD4-202ENST00000396914 PALMDQ9NP74 551 aa22.47■■□□□ 1.19
CHCHD4-202ENST00000396914 NUPL2O15504 423 aaKnown RBP22.46■■□□□ 1.19
CHCHD4-202ENST00000396914 PTTG1O95997 202 aa22.46■■□□□ 1.19
CHCHD4-202ENST00000396914 NPBWR1P48145 328 aa22.46■■□□□ 1.19
CHCHD4-202ENST00000396914 POLR2GP62487 172 aaKnown RBP eCLIP22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms