RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 MFAP4P55083 255 aa13.61□□□□□ -0.23
FXN-203ENST00000396366 TAS2R19P59542 299 aa13.61□□□□□ -0.23
FXN-203ENST00000396366 STEAP1BQ6NZ63 245 aa13.61□□□□□ -0.23
FXN-203ENST00000396366 CLVS1Q8IUQ0 354 aaPredicted RBP13.61□□□□□ -0.23
FXN-203ENST00000396366 COPZ2Q9P299 210 aa13.61□□□□□ -0.23
FXN-203ENST00000396366 SMPXQ9UHP9 88 aa13.61□□□□□ -0.23
FXN-203ENST00000396366 C15orf62A8K5M9 175 aa13.6□□□□□ -0.23
FXN-203ENST00000396366 GABARAPH6UMI1 98 aa13.6□□□□□ -0.23
FXN-203ENST00000396366 NUPL2O15504 423 aaKnown RBP13.6□□□□□ -0.23
FXN-203ENST00000396366 YIF1AO95070 293 aa13.6□□□□□ -0.23
FXN-203ENST00000396366 CTSDP07339 412 aaPredicted RBP13.6□□□□□ -0.23
FXN-203ENST00000396366 AKR1C2P52895 323 aa13.6□□□□□ -0.23
FXN-203ENST00000396366 ERHP84090 104 aaKnown RBP13.6□□□□□ -0.23
FXN-203ENST00000396366 TRIM16LQ309B1 348 aa13.6□□□□□ -0.23
FXN-203ENST00000396366 ODF3L2Q3SX64 289 aa13.6□□□□□ -0.23
FXN-203ENST00000396366 LAMTOR1Q6IAA8 161 aa13.6□□□□□ -0.23
FXN-203ENST00000396366 C15orf40Q8WUR7 153 aa13.6□□□□□ -0.23
FXN-203ENST00000396366 RNF2Q99496 336 aa13.6□□□□□ -0.23
FXN-203ENST00000396366 OVOL2Q9BRP0 275 aa13.6□□□□□ -0.23
FXN-203ENST00000396366 NXF2Q9GZY0 626 aaKnown RBP13.6□□□□□ -0.23
FXN-203ENST00000396366 PLECQ15149 4684 aaKnown RBP13.6□□□□□ -0.23
FXN-203ENST00000396366 IGHV3OR16-13A0A075B7E8 117 aa13.59□□□□□ -0.23
FXN-203ENST00000396366 IGHV3-74A0A0B4J1X5 117 aa13.59□□□□□ -0.23
FXN-203ENST00000396366 IGHV7-4-1A0A0J9YVY3 117 aa13.59□□□□□ -0.23
FXN-203ENST00000396366 CHEK1O14757 476 aa13.59□□□□□ -0.23
FXN-203ENST00000396366 IFNA17P01571 189 aa13.59□□□□□ -0.23
FXN-203ENST00000396366 FCGR2BP31994 310 aaPredicted RBP13.59□□□□□ -0.23
FXN-203ENST00000396366 Q6ZRM9 215 aa13.59□□□□□ -0.23
FXN-203ENST00000396366 ZFAND1Q8TCF1 268 aa13.59□□□□□ -0.23
FXN-203ENST00000396366 TXN2Q99757 166 aa13.59□□□□□ -0.23
FXN-203ENST00000396366 RTBDNQ9BSG5 229 aaPredicted RBP13.59□□□□□ -0.23
FXN-203ENST00000396366 UCP1P25874 307 aa13.58□□□□□ -0.24
FXN-203ENST00000396366 RELQ04864 619 aaPredicted RBP13.58□□□□□ -0.24
FXN-203ENST00000396366 SLC35G3Q8N808 338 aa13.58□□□□□ -0.24
FXN-203ENST00000396366 CCDC71LQ8N9Z2 235 aa13.58□□□□□ -0.24
FXN-203ENST00000396366 TMEM116Q8NCL8 245 aa13.58□□□□□ -0.24
FXN-203ENST00000396366 DYNC2LI1Q8TCX1 351 aa13.58□□□□□ -0.24
FXN-203ENST00000396366 OR10C1Q96KK4 312 aa13.58□□□□□ -0.24
FXN-203ENST00000396366 RHPN1-AS1Q9BWJ2 59 aa13.58□□□□□ -0.24
FXN-203ENST00000396366 IGKV3-7A0A075B6H7 116 aa13.57□□□□□ -0.24
FXN-203ENST00000396366 GNG7O60262 68 aa13.57□□□□□ -0.24
FXN-203ENST00000396366 RNASE2P10153 161 aaKnown RBP13.57□□□□□ -0.24
FXN-203ENST00000396366 SNCAP37840 140 aa13.57□□□□□ -0.24
FXN-203ENST00000396366 TFPI2P48307 235 aa13.57□□□□□ -0.24
FXN-203ENST00000396366 ZNF124Q15973 351 aa13.57□□□□□ -0.24
FXN-203ENST00000396366 MLANAQ16655 118 aa13.57□□□□□ -0.24
FXN-203ENST00000396366 APRG1Q8IVJ8 170 aa13.57□□□□□ -0.24
FXN-203ENST00000396366 LHFPL5Q8TAF8 219 aa13.57□□□□□ -0.24
FXN-203ENST00000396366 DIRAS2Q96HU8 199 aa13.57□□□□□ -0.24
FXN-203ENST00000396366 MRPL36Q9P0J6 103 aaKnown RBP13.57□□□□□ -0.24
FXN-203ENST00000396366 TRAV14DV4A0A0A6YYC5 116 aa13.56□□□□□ -0.24
FXN-203ENST00000396366 APOHP02749 345 aaPredicted RBP13.56□□□□□ -0.24
FXN-203ENST00000396366 OR5AC1P0C628 307 aa13.56□□□□□ -0.24
FXN-203ENST00000396366 RPL35AP18077 110 aaKnown RBP13.56□□□□□ -0.24
FXN-203ENST00000396366 SSBP1Q04837 148 aaKnown RBP13.56□□□□□ -0.24
FXN-203ENST00000396366 IL18Q14116 193 aa13.56□□□□□ -0.24
FXN-203ENST00000396366 PVRIGQ6DKI7 326 aa13.56□□□□□ -0.24
FXN-203ENST00000396366 TOMM20LQ6UXN7 152 aa13.56□□□□□ -0.24
FXN-203ENST00000396366 LILRB2Q8N423 598 aa13.56□□□□□ -0.24
FXN-203ENST00000396366 OR4C16Q8NGL9 310 aa13.56□□□□□ -0.24
FXN-203ENST00000396366 SMIM4Q8WVI0 70 aa13.56□□□□□ -0.24
FXN-203ENST00000396366 TMEM222Q9H0R3 208 aa13.56□□□□□ -0.24
FXN-203ENST00000396366 OR4C46A6NHA9 309 aa13.55□□□□□ -0.24
FXN-203ENST00000396366 INS-IGF2F8WCM5 200 aa13.55□□□□□ -0.24
FXN-203ENST00000396366 ATG12O94817 140 aa13.55□□□□□ -0.24
FXN-203ENST00000396366 CDS2O95674 445 aa13.55□□□□□ -0.24
FXN-203ENST00000396366 HOXA1P49639 335 aaPredicted RBP13.55□□□□□ -0.24
FXN-203ENST00000396366 MEF2DQ14814 521 aa13.55□□□□□ -0.24
FXN-203ENST00000396366 GBGT1Q8N5D6 347 aa13.55□□□□□ -0.24
FXN-203ENST00000396366 DUSP18Q8NEJ0 188 aa13.55□□□□□ -0.24
FXN-203ENST00000396366 GLYATL2Q8WU03 294 aa13.55□□□□□ -0.24
FXN-203ENST00000396366 RRNAD1Q96FB5 475 aaKnown RBP13.55□□□□□ -0.24
FXN-203ENST00000396366 PDCD10Q9BUL8 212 aa13.55□□□□□ -0.24
FXN-203ENST00000396366 NAA60Q9H7X0 242 aa13.55□□□□□ -0.24
FXN-203ENST00000396366 EPPK1P58107 5090 aaKnown RBP13.54□□□□□ -0.24
FXN-203ENST00000396366 IGHV3-66A0A0C4DH42 116 aa13.54□□□□□ -0.24
FXN-203ENST00000396366 TEX13DA0A0J9YY54 714 aaPredicted RBP13.54□□□□□ -0.24
FXN-203ENST00000396366 A0A1B0GU03 582 aa13.54□□□□□ -0.24
FXN-203ENST00000396366 DISC1C4P0D8 188 aa13.54□□□□□ -0.24
FXN-203ENST00000396366 TMEM50AO95807 157 aa13.54□□□□□ -0.24
FXN-203ENST00000396366 MRPS10P82664 201 aaKnown RBP13.54□□□□□ -0.24
FXN-203ENST00000396366 EWSR1Q01844 656 aaKnown RBP eCLIP13.54□□□□□ -0.24
FXN-203ENST00000396366 DEFB135Q30KP9 77 aa13.54□□□□□ -0.24
FXN-203ENST00000396366 FAM90A2PQ658T7 463 aa13.54□□□□□ -0.24
FXN-203ENST00000396366 SELENOHQ8IZQ5 122 aaKnown RBP13.54□□□□□ -0.24
FXN-203ENST00000396366 RNASE11Q8TAA1 199 aaKnown RBP13.54□□□□□ -0.24
FXN-203ENST00000396366 IL17DQ8TAD2 202 aa13.54□□□□□ -0.24
FXN-203ENST00000396366 RAB2BQ8WUD1 216 aa13.54□□□□□ -0.24
FXN-203ENST00000396366 ST8SIA2Q92186 375 aa13.54□□□□□ -0.24
FXN-203ENST00000396366 FNDC4Q9H6D8 234 aaPredicted RBP13.54□□□□□ -0.24
FXN-203ENST00000396366 ZFAND3Q9H8U3 227 aa13.54□□□□□ -0.24
FXN-203ENST00000396366 PRR13Q9NZ81 148 aa13.54□□□□□ -0.24
FXN-203ENST00000396366 GPR132Q9UNW8 380 aa13.54□□□□□ -0.24
FXN-203ENST00000396366 C14orf166Q9Y224 244 aaKnown RBP13.54□□□□□ -0.24
FXN-203ENST00000396366 CTDSPLO15194 276 aa13.53□□□□□ -0.24
FXN-203ENST00000396366 AKAIN1P0CW23 69 aa13.53□□□□□ -0.24
FXN-203ENST00000396366 NPBWR1P48145 328 aa13.53□□□□□ -0.24
FXN-203ENST00000396366 APOC4P55056 127 aa13.53□□□□□ -0.24
FXN-203ENST00000396366 TMBIM6P55061 237 aa13.53□□□□□ -0.24
FXN-203ENST00000396366 OR51S1Q8NGJ8 323 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms