RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 MOB3BQ86TA1 216 aa11.32□□□□□ -0.6
SNCA-204ENST00000394989 OR10W1Q8NGF6 305 aa11.32□□□□□ -0.6
SNCA-204ENST00000394989 OR4F5Q8NH21 305 aa11.32□□□□□ -0.6
SNCA-204ENST00000394989 OSR1Q8TAX0 266 aaPredicted RBP11.32□□□□□ -0.6
SNCA-204ENST00000394989 FAM122AQ96E09 287 aa11.32□□□□□ -0.6
SNCA-204ENST00000394989 HARBI1Q96MB7 349 aa11.32□□□□□ -0.6
SNCA-204ENST00000394989 OR4F4Q96R69 305 aa11.32□□□□□ -0.6
SNCA-204ENST00000394989 PLEKHA3Q9HB20 300 aa11.32□□□□□ -0.6
SNCA-204ENST00000394989 ENY2Q9NPA8 101 aa11.32□□□□□ -0.6
SNCA-204ENST00000394989 SVEP1Q4LDE5 3571 aa11.32□□□□□ -0.6
SNCA-204ENST00000394989 NPPCP23582 126 aa11.32□□□□□ -0.6
SNCA-204ENST00000394989 KLRB1Q12918 225 aa11.32□□□□□ -0.6
SNCA-204ENST00000394989 LINC00311Q8N616 119 aa11.32□□□□□ -0.6
SNCA-204ENST00000394989 C8orf31Q8N9H6 132 aa11.32□□□□□ -0.6
SNCA-204ENST00000394989 ST6GALNAC3Q8NDV1 305 aa11.32□□□□□ -0.6
SNCA-204ENST00000394989 OR10X1Q8NGY0 326 aa11.32□□□□□ -0.6
SNCA-204ENST00000394989 PARLQ9H300 379 aa11.32□□□□□ -0.6
SNCA-204ENST00000394989 DLEU1O43261 78 aa11.31□□□□□ -0.6
SNCA-204ENST00000394989 DLX1P56177 255 aa11.31□□□□□ -0.6
SNCA-204ENST00000394989 IQCJQ1A5X6 159 aa11.31□□□□□ -0.6
SNCA-204ENST00000394989 TMEM249Q2WGJ8 235 aa11.31□□□□□ -0.6
SNCA-204ENST00000394989 BSXQ3C1V8 233 aa11.31□□□□□ -0.6
SNCA-204ENST00000394989 TMEM177Q53S58 311 aa11.31□□□□□ -0.6
SNCA-204ENST00000394989 TEPPQ6URK8 271 aa11.31□□□□□ -0.6
SNCA-204ENST00000394989 CYP2G1PQ6ZSU1 146 aa11.31□□□□□ -0.6
SNCA-204ENST00000394989 MUC15Q8N387 334 aa11.31□□□□□ -0.6
SNCA-204ENST00000394989 NABP2Q9BQ15 211 aa11.31□□□□□ -0.6
SNCA-204ENST00000394989 SRD5A3Q9H8P0 318 aa11.31□□□□□ -0.6
SNCA-204ENST00000394989 POLR3KQ9Y2Y1 108 aaPredicted RBP11.31□□□□□ -0.6
SNCA-204ENST00000394989 CBY1Q9Y3M2 126 aa11.31□□□□□ -0.6
SNCA-204ENST00000394989 ERVFC1-1P60608 527 aa11.31□□□□□ -0.6
SNCA-204ENST00000394989 TMEM242Q9NWH2 141 aa11.31□□□□□ -0.6
SNCA-204ENST00000394989 IGKV1OR2-108A0A075B7D4 117 aa11.3□□□□□ -0.6
SNCA-204ENST00000394989 PGPEP1LA6NFU8 196 aa11.3□□□□□ -0.6
SNCA-204ENST00000394989 APOA2P02652 100 aa11.3□□□□□ -0.6
SNCA-204ENST00000394989 IGHV1-8P0DP01 117 aa11.3□□□□□ -0.6
SNCA-204ENST00000394989 RELQ04864 619 aaPredicted RBP11.3□□□□□ -0.6
SNCA-204ENST00000394989 MS4A10Q96PG2 267 aa11.3□□□□□ -0.6
SNCA-204ENST00000394989 SEPSECSQ9HD40 501 aaKnown RBP11.3□□□□□ -0.6
SNCA-204ENST00000394989 NAT8Q9UHE5 227 aa11.3□□□□□ -0.6
SNCA-204ENST00000394989 CSMD1Q96PZ7 3565 aa11.3□□□□□ -0.6
SNCA-204ENST00000394989 TRBV24-1A0A075B6N3 115 aa11.3□□□□□ -0.6
SNCA-204ENST00000394989 IGFBP2P18065 325 aa11.3□□□□□ -0.6
SNCA-204ENST00000394989 ZNF137PP52743 207 aa11.3□□□□□ -0.6
SNCA-204ENST00000394989 TMEM241Q24JQ0 296 aa11.3□□□□□ -0.6
SNCA-204ENST00000394989 FAM78BQ5VT40 261 aa11.3□□□□□ -0.6
SNCA-204ENST00000394989 STPG3Q8N7X2 389 aa11.3□□□□□ -0.6
SNCA-204ENST00000394989 BEND2Q8NDZ0 799 aa11.3□□□□□ -0.6
SNCA-204ENST00000394989 OR51G1Q8NGK1 321 aa11.3□□□□□ -0.6
SNCA-204ENST00000394989 OR5B3Q8NH48 314 aa11.3□□□□□ -0.6
SNCA-204ENST00000394989 A0A1W2PPV4 95 aa11.3□□□□□ -0.6
SNCA-204ENST00000394989 ZNF320A2RRD8 509 aa11.3□□□□□ -0.6
SNCA-204ENST00000394989 C11orf94C9JXX5 98 aa11.3□□□□□ -0.6
SNCA-204ENST00000394989 GCGP01275 180 aa11.3□□□□□ -0.6
SNCA-204ENST00000394989 IGLV2-23P01705 113 aa11.3□□□□□ -0.6
SNCA-204ENST00000394989 STAG3L2P0CL84 134 aa11.3□□□□□ -0.6
SNCA-204ENST00000394989 STAG3L3P0CL85 134 aa11.3□□□□□ -0.6
SNCA-204ENST00000394989 ARL14EPLP0DKL9 152 aa11.3□□□□□ -0.6
SNCA-204ENST00000394989 ZNF841Q6ZN19 808 aa11.3□□□□□ -0.6
SNCA-204ENST00000394989 TMEM186Q96B77 213 aa11.3□□□□□ -0.6
SNCA-204ENST00000394989 FLYWCH2Q96CP2 140 aaKnown RBP11.3□□□□□ -0.6
SNCA-204ENST00000394989 RITA1Q96K30 269 aa11.3□□□□□ -0.6
SNCA-204ENST00000394989 NDUFA4L2Q9NRX3 87 aa11.3□□□□□ -0.6
SNCA-204ENST00000394989 ATP5G3P48201 142 aa11.29□□□□□ -0.6
SNCA-204ENST00000394989 RND2P52198 227 aa11.29□□□□□ -0.6
SNCA-204ENST00000394989 UBE2G2P60604 165 aa11.29□□□□□ -0.6
SNCA-204ENST00000394989 RPL23P62829 140 aaKnown RBP11.29□□□□□ -0.6
SNCA-204ENST00000394989 MLANAQ16655 118 aa11.29□□□□□ -0.6
SNCA-204ENST00000394989 ZNF672Q499Z4 452 aaPredicted RBP11.29□□□□□ -0.6
SNCA-204ENST00000394989 FAM71F2Q6NXP2 309 aa11.29□□□□□ -0.6
SNCA-204ENST00000394989 TMEM204Q9BSN7 226 aa11.29□□□□□ -0.6
SNCA-204ENST00000394989 NCOR2Q9Y618 2525 aa11.29□□□□□ -0.6
SNCA-204ENST00000394989 TRAV34A0A0B4J273 112 aa11.29□□□□□ -0.6
SNCA-204ENST00000394989 CGB1A6NKQ9 187 aa11.29□□□□□ -0.6
SNCA-204ENST00000394989 RNASE2P10153 161 aaKnown RBP11.29□□□□□ -0.6
SNCA-204ENST00000394989 PRR20EP86478 221 aa11.29□□□□□ -0.6
SNCA-204ENST00000394989 PRR20CP86479 221 aa11.29□□□□□ -0.6
SNCA-204ENST00000394989 PRR20DP86480 221 aa11.29□□□□□ -0.6
SNCA-204ENST00000394989 PRR20BP86481 221 aa11.29□□□□□ -0.6
SNCA-204ENST00000394989 PRR20AP86496 221 aa11.29□□□□□ -0.6
SNCA-204ENST00000394989 PRB3Q04118 309 aaPredicted RBP11.29□□□□□ -0.6
SNCA-204ENST00000394989 SPATA31B1PQ5VZV4 182 aa11.29□□□□□ -0.6
SNCA-204ENST00000394989 Q6ZVH6 145 aa11.29□□□□□ -0.6
SNCA-204ENST00000394989 OR4C13Q8NGP0 309 aa11.29□□□□□ -0.6
SNCA-204ENST00000394989 ABCA4P78363 2273 aa11.29□□□□□ -0.6
SNCA-204ENST00000394989 TPRP12270 2363 aaKnown RBP11.29□□□□□ -0.6
SNCA-204ENST00000394989 RPLP1P05386 114 aaKnown RBP11.28□□□□□ -0.6
SNCA-204ENST00000394989 PFN1P07737 140 aaKnown RBP11.28□□□□□ -0.6
SNCA-204ENST00000394989 PDPNQ86YL7 162 aa11.28□□□□□ -0.6
SNCA-204ENST00000394989 OR9G1Q8NH87 305 aa11.28□□□□□ -0.6
SNCA-204ENST00000394989 FAM103A1Q9BTL3 118 aaKnown RBP11.28□□□□□ -0.6
SNCA-204ENST00000394989 NAGKQ9UJ70 344 aa11.28□□□□□ -0.6
SNCA-204ENST00000394989 FNDC10F2Z333 226 aa11.28□□□□□ -0.6
SNCA-204ENST00000394989 LINC00869P0C866 280 aa11.28□□□□□ -0.6
SNCA-204ENST00000394989 RPL8P62917 257 aaKnown RBP11.28□□□□□ -0.6
SNCA-204ENST00000394989 C2orf83Q53S99 150 aa11.28□□□□□ -0.6
SNCA-204ENST00000394989 VN1R17PQ8TDU5 208 aa11.28□□□□□ -0.6
SNCA-204ENST00000394989 NEIL1Q96FI4 390 aaPredicted RBP11.28□□□□□ -0.6
SNCA-204ENST00000394989 IMMP2LQ96T52 175 aa11.28□□□□□ -0.6
SNCA-204ENST00000394989 TMEM133Q9H2Q1 129 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms