RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 WDR89Q96FK6 387 aaPredicted RBP23.2■■□□□ 1.3
CMTM4-202ENST00000394106 ATP6V0BQ99437 205 aa23.2■■□□□ 1.3
CMTM4-202ENST00000394106 I3L2K1 104 aa23.19■■□□□ 1.3
CMTM4-202ENST00000394106 MT-CO2P00403 227 aa23.19■■□□□ 1.3
CMTM4-202ENST00000394106 IGHV3-48P01763 117 aa23.19■■□□□ 1.3
CMTM4-202ENST00000394106 FAUP35544 74 aaKnown RBP23.19■■□□□ 1.3
CMTM4-202ENST00000394106 KLF9Q13886 244 aaPredicted RBP23.19■■□□□ 1.3
CMTM4-202ENST00000394106 ZNF57Q68EA5 555 aaPredicted RBP23.19■■□□□ 1.3
CMTM4-202ENST00000394106 Q6ZRM9 215 aa23.19■■□□□ 1.3
CMTM4-202ENST00000394106 CCDC190Q86UF4 302 aa23.19■■□□□ 1.3
CMTM4-202ENST00000394106 FAM219AQ8IW50 185 aa23.19■■□□□ 1.3
CMTM4-202ENST00000394106 TOMM5Q8N4H5 51 aa23.19■■□□□ 1.3
CMTM4-202ENST00000394106 TMEM190Q8WZ59 177 aa23.19■■□□□ 1.3
CMTM4-202ENST00000394106 TMEM230Q96A57 120 aa23.19■■□□□ 1.3
CMTM4-202ENST00000394106 WWC2-AS2Q96NR7 200 aa23.19■■□□□ 1.3
CMTM4-202ENST00000394106 ENY2Q9NPA8 101 aa23.19■■□□□ 1.3
CMTM4-202ENST00000394106 C19orf73Q9NVV2 129 aa23.19■■□□□ 1.3
CMTM4-202ENST00000394106 ADMP35318 185 aa23.18■■□□□ 1.3
CMTM4-202ENST00000394106 AP3S2P59780 193 aa23.18■■□□□ 1.3
CMTM4-202ENST00000394106 BTNL8Q6UX41 500 aa23.18■■□□□ 1.3
CMTM4-202ENST00000394106 TUBA4BQ9H853 241 aa23.18■■□□□ 1.3
CMTM4-202ENST00000394106 KCNIP3Q9Y2W7 256 aa23.18■■□□□ 1.3
CMTM4-202ENST00000394106 A8MZ25 164 aa23.17■■□□□ 1.3
CMTM4-202ENST00000394106 AKR1C4P17516 323 aa23.17■■□□□ 1.3
CMTM4-202ENST00000394106 MFAP4P55083 255 aa23.17■■□□□ 1.3
CMTM4-202ENST00000394106 ELLP55199 621 aaPredicted RBP23.17■■□□□ 1.3
CMTM4-202ENST00000394106 TMEM61Q8N0U2 210 aa23.17■■□□□ 1.3
CMTM4-202ENST00000394106 MARC2Q969Z3 335 aa23.17■■□□□ 1.3
CMTM4-202ENST00000394106 NEURL2Q9BR09 285 aa23.17■■□□□ 1.3
CMTM4-202ENST00000394106 C20orf24Q9BUV8 137 aa23.17■■□□□ 1.3
CMTM4-202ENST00000394106 GAR1Q9NY12 217 aaKnown RBP23.17■■□□□ 1.3
CMTM4-202ENST00000394106 PRR13Q9NZ81 148 aa23.17■■□□□ 1.3
CMTM4-202ENST00000394106 CTNNBIP1Q9NSA3 81 aaPredicted RBP23.16■■□□□ 1.3
CMTM4-202ENST00000394106 MRPL27Q9P0M9 148 aaKnown RBP23.16■■□□□ 1.3
CMTM4-202ENST00000394106 CACNG5Q9UF02 275 aa23.16■■□□□ 1.3
CMTM4-202ENST00000394106 IGHV3OR16-8A0A075B7F1 116 aa23.15■■□□□ 1.3
CMTM4-202ENST00000394106 INS-IGF2F8WCM5 200 aa23.15■■□□□ 1.3
CMTM4-202ENST00000394106 NDUFA4O00483 81 aa23.15■■□□□ 1.3
CMTM4-202ENST00000394106 CTSGP08311 255 aa23.15■■□□□ 1.3
CMTM4-202ENST00000394106 CD7P09564 240 aa23.15■■□□□ 1.3
CMTM4-202ENST00000394106 SPANXN2Q5MJ10 180 aa23.15■■□□□ 1.3
CMTM4-202ENST00000394106 GPR146Q96CH1 333 aa23.15■■□□□ 1.3
CMTM4-202ENST00000394106 TMEM56-RWDD3S4R434 201 aa23.15■■□□□ 1.3
CMTM4-202ENST00000394106 NUPL2O15504 423 aaKnown RBP23.14■■□□□ 1.29
CMTM4-202ENST00000394106 SCAF4O95104 1147 aaKnown RBP23.14■■□□□ 1.29
CMTM4-202ENST00000394106 C8orf88P0DMB2 117 aa23.14■■□□□ 1.29
CMTM4-202ENST00000394106 SUB1P53999 127 aaKnown RBP eCLIP23.14■■□□□ 1.29
CMTM4-202ENST00000394106 TMEM187Q14656 261 aa23.14■■□□□ 1.29
CMTM4-202ENST00000394106 TXN2Q99757 166 aa23.14■■□□□ 1.29
CMTM4-202ENST00000394106 ZMAT4Q9H898 229 aa23.14■■□□□ 1.29
CMTM4-202ENST00000394106 DAZ1Q9NQZ3 744 aaKnown RBP23.14■■□□□ 1.29
CMTM4-202ENST00000394106 ZNF207O43670 478 aaKnown RBP23.13■■□□□ 1.29
CMTM4-202ENST00000394106 SPCS3P61009 180 aa23.13■■□□□ 1.29
CMTM4-202ENST00000394106 GALNT14Q96FL9 552 aa23.13■■□□□ 1.29
CMTM4-202ENST00000394106 RCHY1Q96PM5 261 aa23.13■■□□□ 1.29
CMTM4-202ENST00000394106 GNG7O60262 68 aa23.12■■□□□ 1.29
CMTM4-202ENST00000394106 RNASE2P10153 161 aaKnown RBP23.12■■□□□ 1.29
CMTM4-202ENST00000394106 RELQ04864 619 aaPredicted RBP23.12■■□□□ 1.29
CMTM4-202ENST00000394106 TMED4Q7Z7H5 227 aa23.12■■□□□ 1.29
CMTM4-202ENST00000394106 FCGR2BP31994 310 aaPredicted RBP23.11■■□□□ 1.29
CMTM4-202ENST00000394106 SUPT4H1P63272 117 aaKnown RBP23.11■■□□□ 1.29
CMTM4-202ENST00000394106 RBPMS2Q6ZRY4 209 aaKnown RBP23.11■■□□□ 1.29
CMTM4-202ENST00000394106 IL22RA2Q969J5 263 aa23.11■■□□□ 1.29
CMTM4-202ENST00000394106 WFDC10AQ9H1F0 79 aa23.11■■□□□ 1.29
CMTM4-202ENST00000394106 AARDQ4LEZ3 155 aa23.1■■□□□ 1.29
CMTM4-202ENST00000394106 DEFB125Q8N687 156 aa23.1■■□□□ 1.29
CMTM4-202ENST00000394106 DUSP18Q8NEJ0 188 aa23.1■■□□□ 1.29
CMTM4-202ENST00000394106 OR52E5Q8NH55 327 aa23.1■■□□□ 1.29
CMTM4-202ENST00000394106 CORTO00230 105 aa23.09■■□□□ 1.29
CMTM4-202ENST00000394106 YIF1AO95070 293 aa23.09■■□□□ 1.29
CMTM4-202ENST00000394106 NXPH3O95157 252 aa23.09■■□□□ 1.29
CMTM4-202ENST00000394106 ANXA3P12429 323 aa23.09■■□□□ 1.29
CMTM4-202ENST00000394106 SLC16A13Q7RTY0 426 aa23.09■■□□□ 1.29
CMTM4-202ENST00000394106 OR52B4Q8NGK2 314 aa23.09■■□□□ 1.29
CMTM4-202ENST00000394106 SRRQ9GZT4 340 aa23.09■■□□□ 1.29
CMTM4-202ENST00000394106 TM2D3Q9BRN9 247 aa23.08■■□□□ 1.29
CMTM4-202ENST00000394106 HEYLQ9NQ87 328 aaPredicted RBP23.08■■□□□ 1.29
CMTM4-202ENST00000394106 TRAV25A0A0B4J276 109 aa23.07■■□□□ 1.28
CMTM4-202ENST00000394106 C15orf62A8K5M9 175 aa23.07■■□□□ 1.28
CMTM4-202ENST00000394106 CEBPZOSA8MTT3 80 aa23.07■■□□□ 1.28
CMTM4-202ENST00000394106 OR11H12B2RN74 326 aa23.07■■□□□ 1.28
CMTM4-202ENST00000394106 K7EMT4 169 aa23.07■■□□□ 1.28
CMTM4-202ENST00000394106 SULT1A3P0DMM9 295 aa23.07■■□□□ 1.28
CMTM4-202ENST00000394106 SULT1A4P0DMN0 295 aa23.07■■□□□ 1.28
CMTM4-202ENST00000394106 NPBWR1P48145 328 aa23.07■■□□□ 1.28
CMTM4-202ENST00000394106 HAGHQ16775 308 aa23.07■■□□□ 1.28
CMTM4-202ENST00000394106 PVRIGQ6DKI7 326 aa23.07■■□□□ 1.28
CMTM4-202ENST00000394106 LGI3Q8N145 548 aa23.07■■□□□ 1.28
CMTM4-202ENST00000394106 DEDD2Q8WXF8 326 aa23.07■■□□□ 1.28
CMTM4-202ENST00000394106 ZNF414Q96IQ9 312 aa23.07■■□□□ 1.28
CMTM4-202ENST00000394106 OPRK1P41145 380 aa23.06■■□□□ 1.28
CMTM4-202ENST00000394106 INPP1P49441 399 aa23.06■■□□□ 1.28
CMTM4-202ENST00000394106 SRPXP78539 464 aa23.06■■□□□ 1.28
CMTM4-202ENST00000394106 LYZL2Q7Z4W2 148 aa23.06■■□□□ 1.28
CMTM4-202ENST00000394106 SRD5A3Q9H8P0 318 aa23.06■■□□□ 1.28
CMTM4-202ENST00000394106 A0A0B4J2A0 478 aa23.05■■□□□ 1.28
CMTM4-202ENST00000394106 HTR2BP41595 481 aa23.05■■□□□ 1.28
CMTM4-202ENST00000394106 BSXQ3C1V8 233 aa23.05■■□□□ 1.28
CMTM4-202ENST00000394106 ANKRD55Q3KP44 614 aa23.05■■□□□ 1.28
CMTM4-202ENST00000394106 SLC25A21Q9BQT8 299 aaPredicted RBP23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms