RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 CNBD2Q96M20 576 aa11.14□□□□□ -0.63
CHMP3-202ENST00000393773 TXN2Q99757 166 aa11.14□□□□□ -0.63
CHMP3-202ENST00000393773 EHFQ9NZC4 300 aa11.14□□□□□ -0.63
CHMP3-202ENST00000393773 ANAPC10Q9UM13 185 aa11.14□□□□□ -0.63
CHMP3-202ENST00000393773 TRAV10A0A0B4J240 114 aa11.13□□□□□ -0.63
CHMP3-202ENST00000393773 ZNF705EA8MWA4 302 aaPredicted RBP11.13□□□□□ -0.63
CHMP3-202ENST00000393773 ANKRD65E5RJM6 399 aa11.13□□□□□ -0.63
CHMP3-202ENST00000393773 MT-CO2P00403 227 aa11.13□□□□□ -0.63
CHMP3-202ENST00000393773 IGHV3-48P01763 117 aa11.13□□□□□ -0.63
CHMP3-202ENST00000393773 CD5P06127 495 aa11.13□□□□□ -0.63
CHMP3-202ENST00000393773 PSMB9P28065 219 aa11.13□□□□□ -0.63
CHMP3-202ENST00000393773 HLA-DMBP28068 263 aa11.13□□□□□ -0.63
CHMP3-202ENST00000393773 CBX5P45973 191 aa11.13□□□□□ -0.63
CHMP3-202ENST00000393773 PAFAH1B2P68402 229 aa11.13□□□□□ -0.63
CHMP3-202ENST00000393773 TOMM20LQ6UXN7 152 aa11.13□□□□□ -0.63
CHMP3-202ENST00000393773 TRPT1Q86TN4 253 aaKnown RBP11.13□□□□□ -0.63
CHMP3-202ENST00000393773 GINS3Q9BRX5 216 aa11.13□□□□□ -0.63
CHMP3-202ENST00000393773 X6R8D5 127 aa11.13□□□□□ -0.63
CHMP3-202ENST00000393773 ST8SIA3O43173 380 aa11.12□□□□□ -0.63
CHMP3-202ENST00000393773 GNG7O60262 68 aa11.12□□□□□ -0.63
CHMP3-202ENST00000393773 AMBPP02760 352 aa11.12□□□□□ -0.63
CHMP3-202ENST00000393773 EIF4EP06730 217 aaKnown RBP11.12□□□□□ -0.63
CHMP3-202ENST00000393773 MIFP14174 115 aa11.12□□□□□ -0.63
CHMP3-202ENST00000393773 MXD1Q05195 221 aa11.12□□□□□ -0.63
CHMP3-202ENST00000393773 DHRS11Q6UWP2 260 aa11.12□□□□□ -0.63
CHMP3-202ENST00000393773 IZUMO2Q6UXV1 221 aa11.12□□□□□ -0.63
CHMP3-202ENST00000393773 TSC22D3Q99576 134 aa11.12□□□□□ -0.63
CHMP3-202ENST00000393773 ZNF2Q9BSG1 426 aaPredicted RBP11.12□□□□□ -0.63
CHMP3-202ENST00000393773 RNF167Q9H6Y7 350 aa11.12□□□□□ -0.63
CHMP3-202ENST00000393773 FKBP11Q9NYL4 201 aa11.12□□□□□ -0.63
CHMP3-202ENST00000393773 ELOA3CA0A087WX78 387 aaPredicted RBP11.11□□□□□ -0.63
CHMP3-202ENST00000393773 IGHV3-66A0A0C4DH42 116 aa11.11□□□□□ -0.63
CHMP3-202ENST00000393773 RTL8CO15255 209 aa11.11□□□□□ -0.63
CHMP3-202ENST00000393773 PRCDQ00LT1 54 aa11.11□□□□□ -0.63
CHMP3-202ENST00000393773 TMEM41BQ5BJD5 291 aa11.11□□□□□ -0.63
CHMP3-202ENST00000393773 IDNKQ5T6J7 187 aa11.11□□□□□ -0.63
CHMP3-202ENST00000393773 STHQ8IWL8 128 aa11.11□□□□□ -0.63
CHMP3-202ENST00000393773 RNF126Q9BV68 326 aa11.11□□□□□ -0.63
CHMP3-202ENST00000393773 IFT46Q9NQC8 304 aa11.11□□□□□ -0.63
CHMP3-202ENST00000393773 CELA1Q9UNI1 258 aa11.11□□□□□ -0.63
CHMP3-202ENST00000393773 SSR3Q9UNL2 185 aa11.11□□□□□ -0.63
CHMP3-202ENST00000393773 DNASE2O00115 360 aaPredicted RBP11.1□□□□□ -0.63
CHMP3-202ENST00000393773 GPR31O00270 319 aa11.1□□□□□ -0.63
CHMP3-202ENST00000393773 IGKV1-39P01597 117 aa11.1□□□□□ -0.63
CHMP3-202ENST00000393773 IGKV1D-39P04432 117 aa11.1□□□□□ -0.63
CHMP3-202ENST00000393773 SPP1P10451 314 aa11.1□□□□□ -0.63
CHMP3-202ENST00000393773 RFX2P48378 723 aa11.1□□□□□ -0.63
CHMP3-202ENST00000393773 PVRIGQ6DKI7 326 aa11.1□□□□□ -0.63
CHMP3-202ENST00000393773 ZNF600Q6ZNG1 722 aa11.1□□□□□ -0.63
CHMP3-202ENST00000393773 SPARTQ8N0X7 666 aa11.1□□□□□ -0.63
CHMP3-202ENST00000393773 TSPAN14Q8NG11 270 aa11.1□□□□□ -0.63
CHMP3-202ENST00000393773 FCGR1BQ92637 280 aa11.1□□□□□ -0.63
CHMP3-202ENST00000393773 PINX1Q96BK5 328 aaKnown RBP11.1□□□□□ -0.63
CHMP3-202ENST00000393773 SEC22AQ96IW7 307 aa11.1□□□□□ -0.63
CHMP3-202ENST00000393773 PUS1Q9Y606 427 aaKnown RBP eCLIP11.1□□□□□ -0.63
CHMP3-202ENST00000393773 A0A1B0GU03 582 aa11.09□□□□□ -0.63
CHMP3-202ENST00000393773 K7EQG2 157 aa11.09□□□□□ -0.63
CHMP3-202ENST00000393773 HSPA13P48723 471 aa11.09□□□□□ -0.63
CHMP3-202ENST00000393773 CMTM1Q8IZ96 169 aa11.09□□□□□ -0.63
CHMP3-202ENST00000393773 DIABLOQ9NR28 239 aa11.09□□□□□ -0.63
CHMP3-202ENST00000393773 FAM212BQ9NTI7 297 aaPredicted RBP11.09□□□□□ -0.63
CHMP3-202ENST00000393773 RABAC1Q9UI14 185 aa11.09□□□□□ -0.63
CHMP3-202ENST00000393773 PRSS29PA6NIE9 313 aa11.08□□□□□ -0.64
CHMP3-202ENST00000393773 PMP2P02689 132 aa11.08□□□□□ -0.64
CHMP3-202ENST00000393773 NAT1P18440 290 aa11.08□□□□□ -0.64
CHMP3-202ENST00000393773 MORN3Q6PF18 240 aaPredicted RBP11.08□□□□□ -0.64
CHMP3-202ENST00000393773 CSNK1G2-AS1Q8NCQ2 148 aa11.08□□□□□ -0.64
CHMP3-202ENST00000393773 DUSP18Q8NEJ0 188 aa11.08□□□□□ -0.64
CHMP3-202ENST00000393773 GRAMD2BQ96HH9 432 aa11.08□□□□□ -0.64
CHMP3-202ENST00000393773 NACAE9PAV3 2078 aa11.08□□□□□ -0.64
CHMP3-202ENST00000393773 KNCNA6PVL3 124 aa11.07□□□□□ -0.64
CHMP3-202ENST00000393773 ZNF688P0C7X2 276 aa11.07□□□□□ -0.64
CHMP3-202ENST00000393773 NPBWR1P48145 328 aa11.07□□□□□ -0.64
CHMP3-202ENST00000393773 TAS2R46P59540 309 aa11.07□□□□□ -0.64
CHMP3-202ENST00000393773 RPL11P62913 178 aaKnown RBP11.07□□□□□ -0.64
CHMP3-202ENST00000393773 PHLDA2Q53GA4 152 aa11.07□□□□□ -0.64
CHMP3-202ENST00000393773 POM121L12Q8N7R1 296 aa11.07□□□□□ -0.64
CHMP3-202ENST00000393773 STXBP6Q8NFX7 210 aa11.07□□□□□ -0.64
CHMP3-202ENST00000393773 OR5H2Q8NGV7 314 aa11.07□□□□□ -0.64
CHMP3-202ENST00000393773 DCANP1Q8TF63 244 aa11.07□□□□□ -0.64
CHMP3-202ENST00000393773 MRGPRFQ96AM1 343 aa11.07□□□□□ -0.64
CHMP3-202ENST00000393773 SCRT1Q9BWW7 348 aa11.07□□□□□ -0.64
CHMP3-202ENST00000393773 VCX3BQ9H321 246 aa11.07□□□□□ -0.64
CHMP3-202ENST00000393773 CLEC5AQ9NY25 188 aa11.07□□□□□ -0.64
CHMP3-202ENST00000393773 TBC1D24Q9ULP9 559 aa11.07□□□□□ -0.64
CHMP3-202ENST00000393773 C12orf74Q32Q52 190 aa11.06□□□□□ -0.64
CHMP3-202ENST00000393773 SPINK9Q5DT21 86 aa11.06□□□□□ -0.64
CHMP3-202ENST00000393773 ZNF767PQ75MW2 155 aa11.06□□□□□ -0.64
CHMP3-202ENST00000393773 H2BFWTQ7Z2G1 175 aa11.06□□□□□ -0.64
CHMP3-202ENST00000393773 TBC1D26Q86UD7 250 aa11.06□□□□□ -0.64
CHMP3-202ENST00000393773 OR4A16Q8NH70 328 aa11.06□□□□□ -0.64
CHMP3-202ENST00000393773 TMEM231Q9H6L2 316 aa11.06□□□□□ -0.64
CHMP3-202ENST00000393773 MRPL36Q9P0J6 103 aaKnown RBP11.06□□□□□ -0.64
CHMP3-202ENST00000393773 DEFB131BA0A096LNP1 70 aa11.05□□□□□ -0.64
CHMP3-202ENST00000393773 LOC100506127A0A0U1RQW1 187 aa11.05□□□□□ -0.64
CHMP3-202ENST00000393773 TMEM50AO95807 157 aa11.05□□□□□ -0.64
CHMP3-202ENST00000393773 P0DMU3 169 aa11.05□□□□□ -0.64
CHMP3-202ENST00000393773 FAM231AP0DMU4 169 aa11.05□□□□□ -0.64
CHMP3-202ENST00000393773 FAM231CP0DMU5 169 aa11.05□□□□□ -0.64
CHMP3-202ENST00000393773 HRH1P35367 487 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 181 ms