RNA–Protein interactions for RNA: ENST00000393310.5

LIMS1-203, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-203ENST00000393310 OOSP1A8MZH6 123 aa6.75□□□□□ -1.33
LIMS1-203ENST00000393310 TMEM50AO95807 157 aa6.75□□□□□ -1.33
LIMS1-203ENST00000393310 ZNF93P35789 620 aaPredicted RBP6.75□□□□□ -1.33
LIMS1-203ENST00000393310 MVDP53602 400 aa6.75□□□□□ -1.33
LIMS1-203ENST00000393310 RPL31P62899 125 aaKnown RBP6.75□□□□□ -1.33
LIMS1-203ENST00000393310 ZNF584Q8IVC4 421 aa6.75□□□□□ -1.33
LIMS1-203ENST00000393310 ARIH2OSQ8N7S6 290 aa6.75□□□□□ -1.33
LIMS1-203ENST00000393310 VSTM2AQ8TAG5 236 aa6.75□□□□□ -1.33
LIMS1-203ENST00000393310 GCM1Q9NP62 436 aa6.75□□□□□ -1.33
LIMS1-203ENST00000393310 DNAJC27Q9NZQ0 273 aa6.75□□□□□ -1.33
LIMS1-203ENST00000393310 ICAM5Q9UMF0 924 aa6.75□□□□□ -1.33
LIMS1-203ENST00000393310 ANKRD12Q6UB98 2062 aa6.75□□□□□ -1.33
LIMS1-203ENST00000393310 M0R129 80 aa6.75□□□□□ -1.33
LIMS1-203ENST00000393310 DPM2O94777 84 aa6.75□□□□□ -1.33
LIMS1-203ENST00000393310 NDUFA7O95182 113 aa6.75□□□□□ -1.33
LIMS1-203ENST00000393310 OR1E2P47887 323 aa6.75□□□□□ -1.33
LIMS1-203ENST00000393310 ISL1P61371 349 aa6.75□□□□□ -1.33
LIMS1-203ENST00000393310 SLC35E3Q7Z769 313 aa6.75□□□□□ -1.33
LIMS1-203ENST00000393310 TMEM204Q9BSN7 226 aa6.75□□□□□ -1.33
LIMS1-203ENST00000393310 SLC25A39Q9BZJ4 359 aaPredicted RBP6.75□□□□□ -1.33
LIMS1-203ENST00000393310 BCL2L10Q9HD36 194 aa6.75□□□□□ -1.33
LIMS1-203ENST00000393310 PARP11Q9NR21 331 aa6.75□□□□□ -1.33
LIMS1-203ENST00000393310 KIAA1549LQ6ZVL6 1849 aa6.75□□□□□ -1.33
LIMS1-203ENST00000393310 PIEZO2Q9H5I5 2752 aa6.75□□□□□ -1.33
LIMS1-203ENST00000393310 IGHV1-69DA0A0B4J2H0 117 aa6.75□□□□□ -1.33
LIMS1-203ENST00000393310 C17orf112F2Z3M2 114 aa6.75□□□□□ -1.33
LIMS1-203ENST00000393310 M0R1W7 72 aa6.75□□□□□ -1.33
LIMS1-203ENST00000393310 SDHDO14521 159 aa6.75□□□□□ -1.33
LIMS1-203ENST00000393310 NGFP01138 241 aa6.75□□□□□ -1.33
LIMS1-203ENST00000393310 IGHV1-69P01742 117 aa6.75□□□□□ -1.33
LIMS1-203ENST00000393310 IGHV3-13P01766 116 aa6.75□□□□□ -1.33
LIMS1-203ENST00000393310 ORM2P19652 201 aa6.75□□□□□ -1.33
LIMS1-203ENST00000393310 INSL3P51460 131 aa6.75□□□□□ -1.33
LIMS1-203ENST00000393310 RBMXL1Q96E39 390 aaKnown RBP6.75□□□□□ -1.33
LIMS1-203ENST00000393310 GNPNAT1Q96EK6 184 aaPredicted RBP6.75□□□□□ -1.33
LIMS1-203ENST00000393310 TCF19Q9Y242 345 aa6.75□□□□□ -1.33
LIMS1-203ENST00000393310 U3KQE9 123 aa6.75□□□□□ -1.33
LIMS1-203ENST00000393310 MUC22E2RYF6 1773 aaPredicted RBP6.74□□□□□ -1.33
LIMS1-203ENST00000393310 MEGF11A6BM72 1044 aa6.74□□□□□ -1.33
LIMS1-203ENST00000393310 SRRM5B3KS81 715 aa6.74□□□□□ -1.33
LIMS1-203ENST00000393310 HRKO00198 91 aa6.74□□□□□ -1.33
LIMS1-203ENST00000393310 SLC25A5P05141 298 aaKnown RBP6.74□□□□□ -1.33
LIMS1-203ENST00000393310 AMY2BP19961 511 aa6.74□□□□□ -1.33
LIMS1-203ENST00000393310 SHC1P29353 583 aa6.74□□□□□ -1.33
LIMS1-203ENST00000393310 LGALS7P47929 136 aa6.74□□□□□ -1.33
LIMS1-203ENST00000393310 MEF2CQ06413 473 aaPredicted RBP6.74□□□□□ -1.33
LIMS1-203ENST00000393310 ZNF345Q14585 488 aa6.74□□□□□ -1.33
LIMS1-203ENST00000393310 NDUFA11Q86Y39 141 aa6.74□□□□□ -1.33
LIMS1-203ENST00000393310 UBE2DNLQ8IWF7 75 aa6.74□□□□□ -1.33
LIMS1-203ENST00000393310 EMG1Q92979 244 aaKnown RBP6.74□□□□□ -1.33
LIMS1-203ENST00000393310 ADAT3Q96EY9 351 aaPredicted RBP6.74□□□□□ -1.33
LIMS1-203ENST00000393310 SRXN1Q9BYN0 137 aa6.74□□□□□ -1.33
LIMS1-203ENST00000393310 ALPK2Q86TB3 2170 aa6.74□□□□□ -1.33
LIMS1-203ENST00000393310 FABP5P3A8MUU1 101 aa6.74□□□□□ -1.33
LIMS1-203ENST00000393310 TRACP01848 142 aa6.74□□□□□ -1.33
LIMS1-203ENST00000393310 CDKN2AP42771 156 aaKnown RBP6.74□□□□□ -1.33
LIMS1-203ENST00000393310 KRTAP24-1Q3LI83 254 aa6.74□□□□□ -1.33
LIMS1-203ENST00000393310 HEPN1Q6WQI6 88 aa6.74□□□□□ -1.33
LIMS1-203ENST00000393310 ZNF627Q7L945 461 aa6.74□□□□□ -1.33
LIMS1-203ENST00000393310 TBC1D26Q86UD7 250 aa6.74□□□□□ -1.33
LIMS1-203ENST00000393310 EMCNQ9ULC0 261 aa6.74□□□□□ -1.33
LIMS1-203ENST00000393310 SIGLEC7Q9Y286 467 aa6.74□□□□□ -1.33
LIMS1-203ENST00000393310 SMAD5-AS1Q9Y6J3 95 aa6.74□□□□□ -1.33
LIMS1-203ENST00000393310 PIGBOS1A0A0B4J2F0 54 aa6.74□□□□□ -1.33
LIMS1-203ENST00000393310 GABARAPH6UMI1 98 aa6.74□□□□□ -1.33
LIMS1-203ENST00000393310 CDC42EP2O14613 210 aa6.74□□□□□ -1.33
LIMS1-203ENST00000393310 EDNRAP25101 427 aa6.74□□□□□ -1.33
LIMS1-203ENST00000393310 PRSS3P35030 304 aa6.74□□□□□ -1.33
LIMS1-203ENST00000393310 RPL11P62913 178 aaKnown RBP6.74□□□□□ -1.33
LIMS1-203ENST00000393310 TMEM30BQ3MIR4 351 aa6.74□□□□□ -1.33
LIMS1-203ENST00000393310 FAM231DQ6ZW35 169 aa6.74□□□□□ -1.33
LIMS1-203ENST00000393310 SPNS2Q8IVW8 549 aa6.74□□□□□ -1.33
LIMS1-203ENST00000393310 NAA38Q9BRA0 125 aaKnown RBP6.74□□□□□ -1.33
LIMS1-203ENST00000393310 PARP12Q9H0J9 701 aaKnown RBP6.74□□□□□ -1.33
LIMS1-203ENST00000393310 ZC3H12DA2A288 527 aaKnown RBP6.73□□□□□ -1.33
LIMS1-203ENST00000393310 CEBPZOSA8MTT3 80 aa6.73□□□□□ -1.33
LIMS1-203ENST00000393310 CXorf49A8MYA2 514 aaPredicted RBP6.73□□□□□ -1.33
LIMS1-203ENST00000393310 TOMM40O96008 361 aa6.73□□□□□ -1.33
LIMS1-203ENST00000393310 NRASP01111 189 aa6.73□□□□□ -1.33
LIMS1-203ENST00000393310 HRASP01112 189 aa6.73□□□□□ -1.33
LIMS1-203ENST00000393310 KRASP01116 189 aa6.73□□□□□ -1.33
LIMS1-203ENST00000393310 LIMS3P0CW19 117 aa6.73□□□□□ -1.33
LIMS1-203ENST00000393310 LIMS4P0CW20 117 aa6.73□□□□□ -1.33
LIMS1-203ENST00000393310 TAS2R45P59539 299 aa6.73□□□□□ -1.33
LIMS1-203ENST00000393310 Q56UQ5 140 aa6.73□□□□□ -1.33
LIMS1-203ENST00000393310 MINOS1Q5TGZ0 78 aa6.73□□□□□ -1.33
LIMS1-203ENST00000393310 DGAT2L7PQ6IED9 249 aa6.73□□□□□ -1.33
LIMS1-203ENST00000393310 GLIPR1L1Q6UWM5 242 aa6.73□□□□□ -1.33
LIMS1-203ENST00000393310 OR2T33Q8NG76 320 aa6.73□□□□□ -1.33
LIMS1-203ENST00000393310 PP6455Q8WZ26 134 aa6.73□□□□□ -1.33
LIMS1-203ENST00000393310 ZNF681Q96N22 645 aa6.73□□□□□ -1.33
LIMS1-203ENST00000393310 HS3ST6Q96QI5 342 aa6.73□□□□□ -1.33
LIMS1-203ENST00000393310 MINOS1-NBL1R4GNA1 71 aa6.73□□□□□ -1.33
LIMS1-203ENST00000393310 TRAV8-2A0A0B4J237 113 aa6.73□□□□□ -1.33
LIMS1-203ENST00000393310 A0A1W2PRE2 83 aa6.73□□□□□ -1.33
LIMS1-203ENST00000393310 CEACAM18A8MTB9 384 aa6.73□□□□□ -1.33
LIMS1-203ENST00000393310 RPL36A-HNRNPH2H7BZ11 118 aa6.73□□□□□ -1.33
LIMS1-203ENST00000393310 PTHLHP12272 177 aa6.73□□□□□ -1.33
LIMS1-203ENST00000393310 PRDX4Q13162 271 aa6.73□□□□□ -1.33
LIMS1-203ENST00000393310 GAGE13Q4V321 117 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms