RNA–Protein interactions for RNA: ENST00000390654.7

COL23A1-201, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS P2 TSL 5 BASIC

Gene COL23A1, Length 3,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-201ENST00000390654 TRAV17A0A0B4J275 112 aa17.13■□□□□ 0.33
COL23A1-201ENST00000390654 FAM90A9PA6NNJ1 464 aa17.13■□□□□ 0.33
COL23A1-201ENST00000390654 PYYP10082 97 aa17.13■□□□□ 0.33
COL23A1-201ENST00000390654 RANP62826 216 aaKnown RBP17.13■□□□□ 0.33
COL23A1-201ENST00000390654 C22orf34Q6ZV56 151 aa17.13■□□□□ 0.33
COL23A1-201ENST00000390654 SLC35D1Q9NTN3 355 aa17.13■□□□□ 0.33
COL23A1-201ENST00000390654 SLC45A2Q9UMX9 530 aa17.13■□□□□ 0.33
COL23A1-201ENST00000390654 FOXA2Q9Y261 457 aaPredicted RBP17.13■□□□□ 0.33
COL23A1-201ENST00000390654 PAFAH1B2P68402 229 aa17.12■□□□□ 0.33
COL23A1-201ENST00000390654 SLC25A15Q9Y619 301 aa17.12■□□□□ 0.33
COL23A1-201ENST00000390654 NEUROG1Q92886 237 aa17.12■□□□□ 0.33
COL23A1-201ENST00000390654 DIRC3C9JPN6 131 aa17.12■□□□□ 0.33
COL23A1-201ENST00000390654 E7EUB6 86 aa17.12■□□□□ 0.33
COL23A1-201ENST00000390654 APELAP0DMC3 54 aa17.12■□□□□ 0.33
COL23A1-201ENST00000390654 PRB4P10163 310 aaPredicted RBP17.12■□□□□ 0.33
COL23A1-201ENST00000390654 CHRNB4P30926 498 aa17.12■□□□□ 0.33
COL23A1-201ENST00000390654 C10orf55Q5SWW7 151 aa17.12■□□□□ 0.33
COL23A1-201ENST00000390654 IBA57Q5T440 356 aaKnown RBP17.12■□□□□ 0.33
COL23A1-201ENST00000390654 SEM1Q6ZVN7 128 aa17.12■□□□□ 0.33
COL23A1-201ENST00000390654 PLSCR4Q9NRQ2 329 aa17.12■□□□□ 0.33
COL23A1-201ENST00000390654 ABCA4P78363 2273 aa17.11■□□□□ 0.33
COL23A1-201ENST00000390654 NPSP0C0P6 89 aa17.11■□□□□ 0.33
COL23A1-201ENST00000390654 CT45A6P0DMU7 189 aa17.11■□□□□ 0.33
COL23A1-201ENST00000390654 CT45A5P0DMU8 189 aa17.11■□□□□ 0.33
COL23A1-201ENST00000390654 CT45A7P0DMV0 189 aa17.11■□□□□ 0.33
COL23A1-201ENST00000390654 RAB7AP51149 207 aa17.11■□□□□ 0.33
COL23A1-201ENST00000390654 TMEM183BQ1AE95 376 aa17.11■□□□□ 0.33
COL23A1-201ENST00000390654 TEX50A0A1B0GTY4 177 aa17.11■□□□□ 0.33
COL23A1-201ENST00000390654 AREGP15514 252 aa17.11■□□□□ 0.33
COL23A1-201ENST00000390654 COMPP49747 757 aaPredicted RBP17.11■□□□□ 0.33
COL23A1-201ENST00000390654 CCL8P80075 99 aa17.11■□□□□ 0.33
COL23A1-201ENST00000390654 C11orf52Q96A22 123 aa17.11■□□□□ 0.33
COL23A1-201ENST00000390654 TECRQ9NZ01 308 aaKnown RBP17.11■□□□□ 0.33
COL23A1-201ENST00000390654 RPH3ALQ9UNE2 315 aa17.11■□□□□ 0.33
COL23A1-201ENST00000390654 C9JCJ5 164 aa17.1■□□□□ 0.33
COL23A1-201ENST00000390654 SAA1P0DJI8 122 aaPredicted RBP17.1■□□□□ 0.33
COL23A1-201ENST00000390654 NRN1Q9NPD7 142 aa17.1■□□□□ 0.33
COL23A1-201ENST00000390654 GPX1P07203 203 aa17.1■□□□□ 0.33
COL23A1-201ENST00000390654 TEX43Q6ZNM6 134 aa17.1■□□□□ 0.33
COL23A1-201ENST00000390654 MIEN1Q9BRT3 115 aa17.1■□□□□ 0.33
COL23A1-201ENST00000390654 TMEM208Q9BTX3 173 aa17.1■□□□□ 0.33
COL23A1-201ENST00000390654 CGB3P0DN86 165 aa17.1■□□□□ 0.33
COL23A1-201ENST00000390654 CGB7P0DN87 165 aa17.1■□□□□ 0.33
COL23A1-201ENST00000390654 KIR2DS2P43631 304 aa17.1■□□□□ 0.33
COL23A1-201ENST00000390654 FAM27E3Q08E93 113 aa17.1■□□□□ 0.33
COL23A1-201ENST00000390654 ZNF355PQ9NSJ1 428 aa17.1■□□□□ 0.33
COL23A1-201ENST00000390654 UBE2L3P68036 154 aaKnown RBP17.09■□□□□ 0.33
COL23A1-201ENST00000390654 ZNF474Q6S9Z5 364 aaPredicted RBP17.09■□□□□ 0.33
COL23A1-201ENST00000390654 TMEM136Q6ZRR5 245 aa17.09■□□□□ 0.33
COL23A1-201ENST00000390654 C1orf162Q8NEQ5 155 aaPredicted RBP17.09■□□□□ 0.33
COL23A1-201ENST00000390654 ZNF292O60281 2723 aa17.09■□□□□ 0.33
COL23A1-201ENST00000390654 K7EM74 188 aa17.09■□□□□ 0.33
COL23A1-201ENST00000390654 RPLP1P05386 114 aaKnown RBP17.09■□□□□ 0.33
COL23A1-201ENST00000390654 CCL3L1P16619 93 aa17.09■□□□□ 0.33
COL23A1-201ENST00000390654 BRS3P32247 399 aa17.09■□□□□ 0.33
COL23A1-201ENST00000390654 PRB3Q04118 309 aaPredicted RBP17.09■□□□□ 0.33
COL23A1-201ENST00000390654 MZT1Q08AG7 82 aa17.09■□□□□ 0.33
COL23A1-201ENST00000390654 MAJINQ3KP22 176 aa17.09■□□□□ 0.33
COL23A1-201ENST00000390654 REG1AP05451 166 aa17.08■□□□□ 0.33
COL23A1-201ENST00000390654 GPR6P46095 362 aaPredicted RBP17.08■□□□□ 0.33
COL23A1-201ENST00000390654 CX3CL1P78423 397 aa17.08■□□□□ 0.33
COL23A1-201ENST00000390654 TNFAIP6P98066 277 aaPredicted RBP17.08■□□□□ 0.33
COL23A1-201ENST00000390654 DIAPH2-AS1Q14236 149 aa17.08■□□□□ 0.33
COL23A1-201ENST00000390654 LCN12Q6JVE5 192 aa17.08■□□□□ 0.33
COL23A1-201ENST00000390654 TMEM167BQ9NRX6 74 aa17.08■□□□□ 0.33
COL23A1-201ENST00000390654 ZNF586Q9NXT0 402 aa17.08■□□□□ 0.33
COL23A1-201ENST00000390654 A0A1W2PS18 150 aa17.08■□□□□ 0.32
COL23A1-201ENST00000390654 SSBP4Q9BWG4 385 aaPredicted RBP17.08■□□□□ 0.32
COL23A1-201ENST00000390654 BMPR1BO00238 502 aa17.07■□□□□ 0.32
COL23A1-201ENST00000390654 UPK2O00526 184 aa17.07■□□□□ 0.32
COL23A1-201ENST00000390654 MMDQ15546 238 aa17.07■□□□□ 0.32
COL23A1-201ENST00000390654 SFXN3Q9BWM7 321 aa17.07■□□□□ 0.32
COL23A1-201ENST00000390654 ZNF318Q5VUA4 2279 aa17.07■□□□□ 0.32
COL23A1-201ENST00000390654 IGHV3-21A0A0B4J1V1 117 aa17.07■□□□□ 0.32
COL23A1-201ENST00000390654 H3BTX0 84 aa17.07■□□□□ 0.32
COL23A1-201ENST00000390654 IGLV2-8P01709 118 aa17.07■□□□□ 0.32
COL23A1-201ENST00000390654 PRCDQ00LT1 54 aa17.07■□□□□ 0.32
COL23A1-201ENST00000390654 MRPL20Q9BYC9 149 aaKnown RBP17.07■□□□□ 0.32
COL23A1-201ENST00000390654 PRNDQ9UKY0 176 aa17.07■□□□□ 0.32
COL23A1-201ENST00000390654 DSCAML1Q8TD84 2053 aa17.07■□□□□ 0.32
COL23A1-201ENST00000390654 MED13LQ71F56 2210 aa17.07■□□□□ 0.32
COL23A1-201ENST00000390654 CAMPP49913 170 aa17.07■□□□□ 0.32
COL23A1-201ENST00000390654 SLAQ13239 276 aa17.07■□□□□ 0.32
COL23A1-201ENST00000390654 HARBI1Q96MB7 349 aa17.07■□□□□ 0.32
COL23A1-201ENST00000390654 GNB1LQ9BYB4 327 aa17.07■□□□□ 0.32
COL23A1-201ENST00000390654 RNF7Q9UBF6 113 aa17.07■□□□□ 0.32
COL23A1-201ENST00000390654 CDC42EP3Q9UKI2 254 aa17.07■□□□□ 0.32
COL23A1-201ENST00000390654 LHBP01229 141 aa17.06■□□□□ 0.32
COL23A1-201ENST00000390654 GNG5P63218 68 aa17.06■□□□□ 0.32
COL23A1-201ENST00000390654 CR1LQ2VPA4 569 aa17.06■□□□□ 0.32
COL23A1-201ENST00000390654 ASCL3Q9NQ33 180 aa17.06■□□□□ 0.32
COL23A1-201ENST00000390654 USF1P22415 310 aaPredicted RBP17.06■□□□□ 0.32
COL23A1-201ENST00000390654 SPATA45Q537H7 98 aa17.06■□□□□ 0.32
COL23A1-201ENST00000390654 LOXL4Q96JB6 756 aa17.06■□□□□ 0.32
COL23A1-201ENST00000390654 GAFA1Q96PS6 74 aa17.06■□□□□ 0.32
COL23A1-201ENST00000390654 CD24P25063 80 aa17.05■□□□□ 0.32
COL23A1-201ENST00000390654 C19orf35Q6ZS72 473 aa17.05■□□□□ 0.32
COL23A1-201ENST00000390654 CORO2AQ92828 525 aa17.05■□□□□ 0.32
COL23A1-201ENST00000390654 TMEM68Q96MH6 324 aa17.05■□□□□ 0.32
COL23A1-201ENST00000390654 SLC25A33Q9BSK2 321 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms