RNA–Protein interactions for RNA: ENST00000389641.8

CCDC57-202, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC57, Length 3,000 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-202ENST00000389641 LEAP2Q969E1 77 aa11.06□□□□□ -0.64
CCDC57-202ENST00000389641 URB1-AS1Q96HZ7 61 aa11.06□□□□□ -0.64
CCDC57-202ENST00000389641 POLDIP2Q9Y2S7 368 aa11.06□□□□□ -0.64
CCDC57-202ENST00000389641 ADAMTS20P59510 1910 aa11.06□□□□□ -0.64
CCDC57-202ENST00000389641 DUTP33316 252 aaKnown RBP11.06□□□□□ -0.64
CCDC57-202ENST00000389641 TRIB1Q96RU8 372 aa11.06□□□□□ -0.64
CCDC57-202ENST00000389641 APOA2P02652 100 aa11.05□□□□□ -0.64
CCDC57-202ENST00000389641 RAB31Q13636 194 aa11.05□□□□□ -0.64
CCDC57-202ENST00000389641 SNRNP40Q96DI7 357 aaKnown RBP11.05□□□□□ -0.64
CCDC57-202ENST00000389641 SAP30LQ9HAJ7 183 aa11.05□□□□□ -0.64
CCDC57-202ENST00000389641 TMEM140Q9NV12 185 aa11.05□□□□□ -0.64
CCDC57-202ENST00000389641 GNG12Q9UBI6 72 aa11.05□□□□□ -0.64
CCDC57-202ENST00000389641 ICE1Q9Y2F5 2266 aa11.05□□□□□ -0.64
CCDC57-202ENST00000389641 LOC102723996A0A087X1L8 192 aa11.05□□□□□ -0.64
CCDC57-202ENST00000389641 HIGD1CA8MV81 97 aa11.05□□□□□ -0.64
CCDC57-202ENST00000389641 VWC2LB2RUY7 222 aa11.05□□□□□ -0.64
CCDC57-202ENST00000389641 COX19Q49B96 90 aa11.05□□□□□ -0.64
CCDC57-202ENST00000389641 UTF1Q5T230 341 aa11.05□□□□□ -0.64
CCDC57-202ENST00000389641 MORN5Q5VZ52 161 aa11.05□□□□□ -0.64
CCDC57-202ENST00000389641 MDP1Q86V88 176 aa11.05□□□□□ -0.64
CCDC57-202ENST00000389641 CHRDL1Q9BU40 450 aa11.05□□□□□ -0.64
CCDC57-202ENST00000389641 EP300Q09472 2414 aaPredicted RBP11.04□□□□□ -0.64
CCDC57-202ENST00000389641 ERVK-16P61578 105 aa11.04□□□□□ -0.64
CCDC57-202ENST00000389641 Q5PR19 223 aa11.04□□□□□ -0.64
CCDC57-202ENST00000389641 OBP2BQ9NPH6 170 aa11.04□□□□□ -0.64
CCDC57-202ENST00000389641 ARR3P36575 388 aa11.04□□□□□ -0.64
CCDC57-202ENST00000389641 ZNF137PP52743 207 aa11.04□□□□□ -0.64
CCDC57-202ENST00000389641 TCF24Q7RTU0 167 aa11.04□□□□□ -0.64
CCDC57-202ENST00000389641 HES7Q9BYE0 225 aa11.04□□□□□ -0.64
CCDC57-202ENST00000389641 DYSFO75923 2080 aa11.04□□□□□ -0.64
CCDC57-202ENST00000389641 IGKV1OR2-108A0A075B7D4 117 aa11.03□□□□□ -0.64
CCDC57-202ENST00000389641 SRFP11831 508 aa11.03□□□□□ -0.64
CCDC57-202ENST00000389641 LHFPL4Q7Z7J7 247 aa11.03□□□□□ -0.64
CCDC57-202ENST00000389641 DUSP13Q9UII6 198 aa11.03□□□□□ -0.64
CCDC57-202ENST00000389641 FZR1Q9UM11 496 aa11.03□□□□□ -0.64
CCDC57-202ENST00000389641 C7orf71A4D174 169 aa11.03□□□□□ -0.64
CCDC57-202ENST00000389641 GAGE10A6NGK3 116 aa11.03□□□□□ -0.64
CCDC57-202ENST00000389641 SYS1-DBNDD2H3BUS1 97 aa11.03□□□□□ -0.64
CCDC57-202ENST00000389641 TMPRSS3P57727 454 aa11.03□□□□□ -0.64
CCDC57-202ENST00000389641 PRR20EP86478 221 aa11.03□□□□□ -0.64
CCDC57-202ENST00000389641 PRR20CP86479 221 aa11.03□□□□□ -0.64
CCDC57-202ENST00000389641 PRR20DP86480 221 aa11.03□□□□□ -0.64
CCDC57-202ENST00000389641 PRR20BP86481 221 aa11.03□□□□□ -0.64
CCDC57-202ENST00000389641 PRR20AP86496 221 aa11.03□□□□□ -0.64
CCDC57-202ENST00000389641 Q0VFX4 171 aa11.03□□□□□ -0.64
CCDC57-202ENST00000389641 SLC35E4Q6ICL7 350 aa11.03□□□□□ -0.64
CCDC57-202ENST00000389641 Q8IYB0 196 aa11.03□□□□□ -0.64
CCDC57-202ENST00000389641 SMIM12Q96EX1 92 aa11.03□□□□□ -0.64
CCDC57-202ENST00000389641 IGF2BP2-AS1Q96M15 143 aa11.03□□□□□ -0.64
CCDC57-202ENST00000389641 TMEM167BQ9NRX6 74 aa11.03□□□□□ -0.64
CCDC57-202ENST00000389641 HSBP1L1C9JCN9 74 aa11.03□□□□□ -0.64
CCDC57-202ENST00000389641 LEPROTL1O95214 131 aa11.03□□□□□ -0.64
CCDC57-202ENST00000389641 OR1B1Q8NGR6 318 aa11.03□□□□□ -0.64
CCDC57-202ENST00000389641 ABCA1O95477 2261 aa11.02□□□□□ -0.64
CCDC57-202ENST00000389641 FAM231BA6NCW3 169 aa11.02□□□□□ -0.65
CCDC57-202ENST00000389641 LPAL2Q16609 132 aa11.02□□□□□ -0.65
CCDC57-202ENST00000389641 FAM120AOSQ5T036 256 aa11.02□□□□□ -0.65
CCDC57-202ENST00000389641 OR9G1Q8NH87 305 aa11.02□□□□□ -0.65
CCDC57-202ENST00000389641 ST20Q9HBF5 79 aa11.02□□□□□ -0.65
CCDC57-202ENST00000389641 MAP1BP46821 2468 aaKnown RBP11.02□□□□□ -0.65
CCDC57-202ENST00000389641 IGHV1-24A0A0C4DH33 117 aa11.02□□□□□ -0.65
CCDC57-202ENST00000389641 IGHV3-48P01763 117 aa11.02□□□□□ -0.65
CCDC57-202ENST00000389641 CSN3P07498 182 aa11.02□□□□□ -0.65
CCDC57-202ENST00000389641 PYYP10082 97 aa11.02□□□□□ -0.65
CCDC57-202ENST00000389641 NRN1LQ496H8 165 aa11.02□□□□□ -0.65
CCDC57-202ENST00000389641 LYSMD4Q5XG99 296 aa11.02□□□□□ -0.65
CCDC57-202ENST00000389641 C12orf54Q6X4T0 127 aa11.02□□□□□ -0.65
CCDC57-202ENST00000389641 LINC00696Q6ZRV3 163 aa11.02□□□□□ -0.65
CCDC57-202ENST00000389641 C1orf229Q6ZS94 237 aaPredicted RBP11.02□□□□□ -0.65
CCDC57-202ENST00000389641 CT55Q8WUE5 264 aa11.02□□□□□ -0.65
CCDC57-202ENST00000389641 LOXL2Q9Y4K0 774 aa11.02□□□□□ -0.65
CCDC57-202ENST00000389641 SPTBN2O15020 2390 aa11.02□□□□□ -0.65
CCDC57-202ENST00000389641 GNG7O60262 68 aa11.01□□□□□ -0.65
CCDC57-202ENST00000389641 SP1P08047 785 aa11.01□□□□□ -0.65
CCDC57-202ENST00000389641 ZNF134P52741 427 aa11.01□□□□□ -0.65
CCDC57-202ENST00000389641 SPEM1Q8N4L4 309 aa11.01□□□□□ -0.65
CCDC57-202ENST00000389641 FER1L6-AS1Q8NA97 138 aa11.01□□□□□ -0.65
CCDC57-202ENST00000389641 S1PR3Q99500 378 aa11.01□□□□□ -0.65
CCDC57-202ENST00000389641 ENY2Q9NPA8 101 aa11.01□□□□□ -0.65
CCDC57-202ENST00000389641 HILPDAQ9Y5L2 63 aa11.01□□□□□ -0.65
CCDC57-202ENST00000389641 ZNF318Q5VUA4 2279 aa11.01□□□□□ -0.65
CCDC57-202ENST00000389641 C21orf140B9A014 251 aa11.01□□□□□ -0.65
CCDC57-202ENST00000389641 CIDEAO60543 219 aa11.01□□□□□ -0.65
CCDC57-202ENST00000389641 WISP2O76076 250 aa11.01□□□□□ -0.65
CCDC57-202ENST00000389641 GNG5P63218 68 aa11.01□□□□□ -0.65
CCDC57-202ENST00000389641 TMEM116Q8NCL8 245 aa11.01□□□□□ -0.65
CCDC57-202ENST00000389641 OR1N2Q8NGR9 330 aa11.01□□□□□ -0.65
CCDC57-202ENST00000389641 SLC25A40Q8TBP6 338 aa11.01□□□□□ -0.65
CCDC57-202ENST00000389641 RAB37Q96AX2 223 aa11.01□□□□□ -0.65
CCDC57-202ENST00000389641 KLF13Q9Y2Y9 288 aaPredicted RBP11.01□□□□□ -0.65
CCDC57-202ENST00000389641 UBE2L3P68036 154 aaKnown RBP11.01□□□□□ -0.65
CCDC57-202ENST00000389641 FAM71F2Q6NXP2 309 aa11.01□□□□□ -0.65
CCDC57-202ENST00000389641 COMMD5Q9GZQ3 224 aa11.01□□□□□ -0.65
CCDC57-202ENST00000389641 SPINT2O43291 252 aa11□□□□□ -0.65
CCDC57-202ENST00000389641 PLAUP00749 431 aa11□□□□□ -0.65
CCDC57-202ENST00000389641 PRB4P10163 310 aaPredicted RBP11□□□□□ -0.65
CCDC57-202ENST00000389641 LINC00470Q9BZP3 86 aa11□□□□□ -0.65
CCDC57-202ENST00000389641 PEF1Q9UBV8 284 aaKnown RBP11□□□□□ -0.65
CCDC57-202ENST00000389641 AMMECR1Q9Y4X0 333 aaPredicted RBP11□□□□□ -0.65
CCDC57-202ENST00000389641 IGLC1P0CG04 106 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms