RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 VWC2Q2TAL6 325 aa8.12□□□□□ -1.11
LTN1-203ENST00000389195 MIR17HGQ75NE6 70 aa8.12□□□□□ -1.11
LTN1-203ENST00000389195 LINC00311Q8N616 119 aa8.12□□□□□ -1.11
LTN1-203ENST00000389195 OR1L8Q8NGR8 309 aa8.12□□□□□ -1.11
LTN1-203ENST00000389195 OR4F5Q8NH21 305 aa8.12□□□□□ -1.11
LTN1-203ENST00000389195 RAB39BQ96DA2 213 aa8.12□□□□□ -1.11
LTN1-203ENST00000389195 OR4F4Q96R69 305 aa8.12□□□□□ -1.11
LTN1-203ENST00000389195 PBDC1Q9BVG4 233 aa8.12□□□□□ -1.11
LTN1-203ENST00000389195 NPVFQ9HCQ7 196 aa8.12□□□□□ -1.11
LTN1-203ENST00000389195 IGHV3OR16-8A0A075B7F1 116 aa8.11□□□□□ -1.11
LTN1-203ENST00000389195 A0A1W2PPH5 198 aa8.11□□□□□ -1.11
LTN1-203ENST00000389195 LY6LH3BQJ8 138 aa8.11□□□□□ -1.11
LTN1-203ENST00000389195 CNIH1O95406 144 aa8.11□□□□□ -1.11
LTN1-203ENST00000389195 CDC34P49427 236 aaPredicted RBP8.11□□□□□ -1.11
LTN1-203ENST00000389195 ATP5J2P56134 94 aa8.11□□□□□ -1.11
LTN1-203ENST00000389195 TEPPQ6URK8 271 aa8.11□□□□□ -1.11
LTN1-203ENST00000389195 PPP1R27Q86WC6 154 aa8.11□□□□□ -1.11
LTN1-203ENST00000389195 FAM24BQ8N5W8 94 aa8.11□□□□□ -1.11
LTN1-203ENST00000389195 SSX3Q99909 188 aa8.11□□□□□ -1.11
LTN1-203ENST00000389195 SLC25A33Q9BSK2 321 aa8.11□□□□□ -1.11
LTN1-203ENST00000389195 LOC102723971A0A1B0GUV8 181 aa8.11□□□□□ -1.11
LTN1-203ENST00000389195 hCG_1809904A0A1W2PP81 198 aa8.11□□□□□ -1.11
LTN1-203ENST00000389195 A0A1W2PPV4 95 aa8.11□□□□□ -1.11
LTN1-203ENST00000389195 A0A1W2PR64 198 aa8.11□□□□□ -1.11
LTN1-203ENST00000389195 A0A1W2PRV1 198 aa8.11□□□□□ -1.11
LTN1-203ENST00000389195 VENTXO95231 258 aa8.11□□□□□ -1.11
LTN1-203ENST00000389195 SNAPINO95295 136 aa8.11□□□□□ -1.11
LTN1-203ENST00000389195 BCL2P10415 239 aa8.11□□□□□ -1.11
LTN1-203ENST00000389195 PRSS8Q16651 343 aa8.11□□□□□ -1.11
LTN1-203ENST00000389195 TPTE2P1Q5T6R2 138 aa8.11□□□□□ -1.11
LTN1-203ENST00000389195 FAM78BQ5VT40 261 aa8.11□□□□□ -1.11
LTN1-203ENST00000389195 LEMD1Q68G75 181 aa8.11□□□□□ -1.11
LTN1-203ENST00000389195 DHRS7BQ6IAN0 325 aaPredicted RBP8.11□□□□□ -1.11
LTN1-203ENST00000389195 PIP4P2Q8N4L2 257 aa8.11□□□□□ -1.11
LTN1-203ENST00000389195 TMEM167AQ8TBQ9 72 aa8.11□□□□□ -1.11
LTN1-203ENST00000389195 ZNF596Q8TC21 504 aa8.11□□□□□ -1.11
LTN1-203ENST00000389195 LINC00527Q9UJ94 153 aa8.11□□□□□ -1.11
LTN1-203ENST00000389195 LSM4Q9Y4Z0 139 aaKnown RBP8.11□□□□□ -1.11
LTN1-203ENST00000389195 MYO9AB2RTY4 2548 aa8.11□□□□□ -1.11
LTN1-203ENST00000389195 IGHV3-35A0A0C4DH35 117 aa8.1□□□□□ -1.11
LTN1-203ENST00000389195 IGLC7A0M8Q6 106 aa8.1□□□□□ -1.11
LTN1-203ENST00000389195 LINC01548A6NM66 108 aa8.1□□□□□ -1.11
LTN1-203ENST00000389195 FAM90A9PA6NNJ1 464 aa8.1□□□□□ -1.11
LTN1-203ENST00000389195 TOX4O94842 621 aa8.1□□□□□ -1.11
LTN1-203ENST00000389195 HOXB4P17483 251 aaPredicted RBP8.1□□□□□ -1.11
LTN1-203ENST00000389195 USF1P22415 310 aaPredicted RBP8.1□□□□□ -1.11
LTN1-203ENST00000389195 NPPCP23582 126 aa8.1□□□□□ -1.11
LTN1-203ENST00000389195 ATP6V1FQ16864 119 aa8.1□□□□□ -1.11
LTN1-203ENST00000389195 TMEM219Q86XT9 240 aa8.1□□□□□ -1.11
LTN1-203ENST00000389195 DPM3Q9P2X0 92 aa8.1□□□□□ -1.11
LTN1-203ENST00000389195 LINC00869P0C866 280 aa8.1□□□□□ -1.11
LTN1-203ENST00000389195 RND2P52198 227 aa8.1□□□□□ -1.11
LTN1-203ENST00000389195 ZNF137PP52743 207 aa8.1□□□□□ -1.11
LTN1-203ENST00000389195 DLK1P80370 383 aa8.1□□□□□ -1.11
LTN1-203ENST00000389195 ERHP84090 104 aaKnown RBP8.1□□□□□ -1.11
LTN1-203ENST00000389195 VMA21Q3ZAQ7 101 aa8.1□□□□□ -1.11
LTN1-203ENST00000389195 FAM90A2PQ658T7 463 aa8.1□□□□□ -1.11
LTN1-203ENST00000389195 OR5B3Q8NH48 314 aa8.1□□□□□ -1.11
LTN1-203ENST00000389195 MBD3L1Q8WWY6 194 aa8.1□□□□□ -1.11
LTN1-203ENST00000389195 TMEM37Q8WXS4 190 aa8.1□□□□□ -1.11
LTN1-203ENST00000389195 MTORP42345 2549 aa8.1□□□□□ -1.11
LTN1-203ENST00000389195 FLNAP21333 2647 aaKnown RBP8.1□□□□□ -1.11
LTN1-203ENST00000389195 ITPR3Q14573 2671 aa8.1□□□□□ -1.11
LTN1-203ENST00000389195 PRTN3P24158 256 aa8.09□□□□□ -1.11
LTN1-203ENST00000389195 IL3RAP26951 378 aa8.09□□□□□ -1.11
LTN1-203ENST00000389195 RPP30P78346 268 aaKnown RBP8.09□□□□□ -1.11
LTN1-203ENST00000389195 NDPQ00604 133 aa8.09□□□□□ -1.11
LTN1-203ENST00000389195 ZNF506Q5JVG8 444 aa8.09□□□□□ -1.11
LTN1-203ENST00000389195 NECAP1Q8NC96 275 aa8.09□□□□□ -1.11
LTN1-203ENST00000389195 EAF1Q96JC9 268 aaPredicted RBP8.09□□□□□ -1.11
LTN1-203ENST00000389195 TBX15Q96SF7 602 aa8.09□□□□□ -1.11
LTN1-203ENST00000389195 ACTR3CQ9C0K3 210 aaPredicted RBP8.09□□□□□ -1.11
LTN1-203ENST00000389195 CTXND1A0A1B0GTU2 59 aa8.09□□□□□ -1.11
LTN1-203ENST00000389195 TMEM8BA6NDV4 472 aa8.09□□□□□ -1.11
LTN1-203ENST00000389195 NUDT19A8MXV4 375 aa8.09□□□□□ -1.11
LTN1-203ENST00000389195 OVOL3O00110 214 aa8.09□□□□□ -1.11
LTN1-203ENST00000389195 MC5RP33032 325 aa8.09□□□□□ -1.11
LTN1-203ENST00000389195 TAGLN2P37802 199 aaKnown RBP8.09□□□□□ -1.11
LTN1-203ENST00000389195 CENPVQ7Z7K6 275 aaPredicted RBP8.09□□□□□ -1.11
LTN1-203ENST00000389195 BCL6BQ8N143 479 aaPredicted RBP8.09□□□□□ -1.11
LTN1-203ENST00000389195 BEND2Q8NDZ0 799 aa8.09□□□□□ -1.11
LTN1-203ENST00000389195 C8orf46Q8TAG6 207 aa8.09□□□□□ -1.11
LTN1-203ENST00000389195 SRSF12Q8WXF0 261 aaKnown RBP8.09□□□□□ -1.11
LTN1-203ENST00000389195 SGK494Q96LW2 274 aa8.09□□□□□ -1.11
LTN1-203ENST00000389195 ZNF257Q9Y2Q1 563 aa8.09□□□□□ -1.11
LTN1-203ENST00000389195 KPTNQ9Y664 436 aa8.09□□□□□ -1.11
LTN1-203ENST00000389195 LOC105371267A0A1B0GV96 52 aa8.09□□□□□ -1.12
LTN1-203ENST00000389195 C17orf112F2Z3M2 114 aa8.09□□□□□ -1.12
LTN1-203ENST00000389195 ORM2P19652 201 aa8.09□□□□□ -1.12
LTN1-203ENST00000389195 SAA4P35542 130 aa8.09□□□□□ -1.12
LTN1-203ENST00000389195 RPL27AP46776 148 aaKnown RBP8.09□□□□□ -1.12
LTN1-203ENST00000389195 PAX2Q02962 417 aa8.09□□□□□ -1.12
LTN1-203ENST00000389195 CD69Q07108 199 aa8.09□□□□□ -1.12
LTN1-203ENST00000389195 SLC16A13Q7RTY0 426 aa8.09□□□□□ -1.12
LTN1-203ENST00000389195 CFHR4Q92496 578 aa8.09□□□□□ -1.12
LTN1-203ENST00000389195 CYB5BO43169 146 aa8.08□□□□□ -1.12
LTN1-203ENST00000389195 ACOT6Q3I5F7 207 aaPredicted RBP8.08□□□□□ -1.12
LTN1-203ENST00000389195 SLC35E3Q7Z769 313 aa8.08□□□□□ -1.12
LTN1-203ENST00000389195 LFNGQ8NES3 379 aa8.08□□□□□ -1.12
LTN1-203ENST00000389195 TNFRSF19Q9NS68 423 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms