RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 OR1S2Q8NGQ3 325 aa-3.87□□□□□ -3.03
RNU6-1340P-201ENST00000384438 PIBF1Q8WXW3 757 aa-3.87□□□□□ -3.03
RNU6-1340P-201ENST00000384438 CCL17Q92583 94 aa-3.87□□□□□ -3.03
RNU6-1340P-201ENST00000384438 CYTH2Q99418 400 aa-3.87□□□□□ -3.03
RNU6-1340P-201ENST00000384438 BCL7BQ9BQE9 202 aa-3.87□□□□□ -3.03
RNU6-1340P-201ENST00000384438 CRB3Q9BUF7 120 aa-3.87□□□□□ -3.03
RNU6-1340P-201ENST00000384438 UCK2Q9BZX2 261 aa-3.87□□□□□ -3.03
RNU6-1340P-201ENST00000384438 C6orf62Q9GZU0 229 aaPredicted RBP-3.87□□□□□ -3.03
RNU6-1340P-201ENST00000384438 MS4A12Q9NXJ0 267 aa-3.87□□□□□ -3.03
RNU6-1340P-201ENST00000384438 BET1LQ9NYM9 111 aa-3.87□□□□□ -3.03
RNU6-1340P-201ENST00000384438 GNG12Q9UBI6 72 aa-3.87□□□□□ -3.03
RNU6-1340P-201ENST00000384438 FBXW2Q9UKT8 454 aa-3.87□□□□□ -3.03
RNU6-1340P-201ENST00000384438 PSME4Q14997 1843 aa-3.87□□□□□ -3.03
RNU6-1340P-201ENST00000384438 MYOM3Q5VTT5 1437 aa-3.87□□□□□ -3.03
RNU6-1340P-201ENST00000384438 BRCA2P51587 3418 aa-3.88□□□□□ -3.03
RNU6-1340P-201ENST00000384438 TRBV7-1A0A0A6YYK4 115 aa-3.88□□□□□ -3.03
RNU6-1340P-201ENST00000384438 H0YCG3 227 aa-3.88□□□□□ -3.03
RNU6-1340P-201ENST00000384438 M0R036 132 aa-3.88□□□□□ -3.03
RNU6-1340P-201ENST00000384438 EIF3FO00303 357 aaPredicted RBP-3.88□□□□□ -3.03
RNU6-1340P-201ENST00000384438 NME4O00746 187 aa-3.88□□□□□ -3.03
RNU6-1340P-201ENST00000384438 GOSR2O14653 212 aa-3.88□□□□□ -3.03
RNU6-1340P-201ENST00000384438 KDELR3O43731 214 aa-3.88□□□□□ -3.03
RNU6-1340P-201ENST00000384438 PITX3O75364 302 aa-3.88□□□□□ -3.03
RNU6-1340P-201ENST00000384438 MBD3O95983 291 aa-3.88□□□□□ -3.03
RNU6-1340P-201ENST00000384438 CCDC192P0DO97 292 aa-3.88□□□□□ -3.03
RNU6-1340P-201ENST00000384438 CSNK2A2P19784 350 aaPredicted RBP-3.88□□□□□ -3.03
RNU6-1340P-201ENST00000384438 TAC1P20366 129 aa-3.88□□□□□ -3.03
RNU6-1340P-201ENST00000384438 ACTR1BP42025 376 aa-3.88□□□□□ -3.03
RNU6-1340P-201ENST00000384438 CAPZA2P47755 286 aa-3.88□□□□□ -3.03
RNU6-1340P-201ENST00000384438 PLA2G16P53816 162 aa-3.88□□□□□ -3.03
RNU6-1340P-201ENST00000384438 CLDN12P56749 244 aa-3.88□□□□□ -3.03
RNU6-1340P-201ENST00000384438 FKBP1AP62942 108 aaKnown RBP-3.88□□□□□ -3.03
RNU6-1340P-201ENST00000384438 ELP6Q0PNE2 266 aa-3.88□□□□□ -3.03
RNU6-1340P-201ENST00000384438 RPEL1Q2QD12 228 aa-3.88□□□□□ -3.03
RNU6-1340P-201ENST00000384438 LRRC6Q86X45 466 aa-3.88□□□□□ -3.03
RNU6-1340P-201ENST00000384438 LINC00269Q8N2A0 174 aa-3.88□□□□□ -3.03
RNU6-1340P-201ENST00000384438 OR52L1Q8NGH7 329 aa-3.88□□□□□ -3.03
RNU6-1340P-201ENST00000384438 OR56B2PQ8NGI1 322 aa-3.88□□□□□ -3.03
RNU6-1340P-201ENST00000384438 OR5AR1Q8NGP9 310 aa-3.88□□□□□ -3.03
RNU6-1340P-201ENST00000384438 OR10D3Q8NH80 312 aa-3.88□□□□□ -3.03
RNU6-1340P-201ENST00000384438 CT55Q8WUE5 264 aa-3.88□□□□□ -3.03
RNU6-1340P-201ENST00000384438 CTNNBL1Q8WYA6 563 aaPredicted RBP-3.88□□□□□ -3.03
RNU6-1340P-201ENST00000384438 FAM3CQ92520 227 aa-3.88□□□□□ -3.03
RNU6-1340P-201ENST00000384438 TMEM141Q96I45 108 aa-3.88□□□□□ -3.03
RNU6-1340P-201ENST00000384438 FICDQ9BVA6 458 aa-3.88□□□□□ -3.03
RNU6-1340P-201ENST00000384438 AP1M1Q9BXS5 423 aa-3.88□□□□□ -3.03
RNU6-1340P-201ENST00000384438 CALN1Q9BXU9 219 aa-3.88□□□□□ -3.03
RNU6-1340P-201ENST00000384438 ZYG11BQ9C0D3 744 aa-3.88□□□□□ -3.03
RNU6-1340P-201ENST00000384438 CXorf21Q9HAI6 301 aa-3.88□□□□□ -3.03
RNU6-1340P-201ENST00000384438 POPDC3Q9HBV1 291 aa-3.88□□□□□ -3.03
RNU6-1340P-201ENST00000384438 NOL12Q9UGY1 213 aaKnown RBP eCLIP-3.88□□□□□ -3.03
RNU6-1340P-201ENST00000384438 LINC00527Q9UJ94 153 aa-3.88□□□□□ -3.03
RNU6-1340P-201ENST00000384438 TIAM2Q8IVF5 1701 aa-3.88□□□□□ -3.03
RNU6-1340P-201ENST00000384438 AKNAQ7Z591 1439 aa-3.88□□□□□ -3.03
RNU6-1340P-201ENST00000384438 ARHGEF11O15085 1522 aa-3.89□□□□□ -3.03
RNU6-1340P-201ENST00000384438 A0A0U1RRA0 63 aa-3.89□□□□□ -3.03
RNU6-1340P-201ENST00000384438 LYRM9A8MSI8 78 aa-3.89□□□□□ -3.03
RNU6-1340P-201ENST00000384438 B4DEV8 164 aa-3.89□□□□□ -3.03
RNU6-1340P-201ENST00000384438 ANKRD65E5RJM6 399 aa-3.89□□□□□ -3.03
RNU6-1340P-201ENST00000384438 MED7O43513 233 aa-3.89□□□□□ -3.03
RNU6-1340P-201ENST00000384438 STK16O75716 305 aa-3.89□□□□□ -3.03
RNU6-1340P-201ENST00000384438 NSA2O95478 260 aaKnown RBP-3.89□□□□□ -3.03
RNU6-1340P-201ENST00000384438 YEATS4O95619 227 aa-3.89□□□□□ -3.03
RNU6-1340P-201ENST00000384438 RLN1P04808 185 aa-3.89□□□□□ -3.03
RNU6-1340P-201ENST00000384438 SERPINE2P07093 398 aa-3.89□□□□□ -3.03
RNU6-1340P-201ENST00000384438 HLA-DPA1P20036 260 aa-3.89□□□□□ -3.03
RNU6-1340P-201ENST00000384438 M6PRP20645 277 aa-3.89□□□□□ -3.03
RNU6-1340P-201ENST00000384438 HMGB2P26583 209 aaKnown RBP-3.89□□□□□ -3.03
RNU6-1340P-201ENST00000384438 CCNHP51946 323 aaPredicted RBP-3.89□□□□□ -3.03
RNU6-1340P-201ENST00000384438 TAS2R60P59551 318 aa-3.89□□□□□ -3.03
RNU6-1340P-201ENST00000384438 SNRPD3P62318 126 aaKnown RBP-3.89□□□□□ -3.03
RNU6-1340P-201ENST00000384438 GNA13Q14344 377 aa-3.89□□□□□ -3.03
RNU6-1340P-201ENST00000384438 HFEQ30201 348 aa-3.89□□□□□ -3.03
RNU6-1340P-201ENST00000384438 TPTE2P1Q5T6R2 138 aa-3.89□□□□□ -3.03
RNU6-1340P-201ENST00000384438 ATAD3BQ5T9A4 648 aa-3.89□□□□□ -3.03
RNU6-1340P-201ENST00000384438 GIMAP6Q6P9H5 292 aa-3.89□□□□□ -3.03
RNU6-1340P-201ENST00000384438 SLC7A5P1Q8MH63 180 aa-3.89□□□□□ -3.03
RNU6-1340P-201ENST00000384438 SLC38A4Q969I6 547 aa-3.89□□□□□ -3.03
RNU6-1340P-201ENST00000384438 OR52A5Q9H2C5 316 aa-3.89□□□□□ -3.03
RNU6-1340P-201ENST00000384438 CDC42SE2Q9NRR3 84 aa-3.89□□□□□ -3.03
RNU6-1340P-201ENST00000384438 SLC35A3Q9Y2D2 325 aa-3.89□□□□□ -3.03
RNU6-1340P-201ENST00000384438 IFT172Q9UG01 1749 aa-3.9□□□□□ -3.03
RNU6-1340P-201ENST00000384438 TOPBP1Q92547 1522 aa-3.9□□□□□ -3.03
RNU6-1340P-201ENST00000384438 MMP24-AS1A0A0U1RRL7 71 aa-3.9□□□□□ -3.03
RNU6-1340P-201ENST00000384438 hCG_1809904A0A1W2PP81 198 aa-3.9□□□□□ -3.03
RNU6-1340P-201ENST00000384438 A0A1W2PPE2 198 aa-3.9□□□□□ -3.03
RNU6-1340P-201ENST00000384438 A0A1W2PR64 198 aa-3.9□□□□□ -3.03
RNU6-1340P-201ENST00000384438 FAM223BA6NKX1 122 aa-3.9□□□□□ -3.03
RNU6-1340P-201ENST00000384438 KPNA3O00505 521 aaPredicted RBP-3.9□□□□□ -3.03
RNU6-1340P-201ENST00000384438 DIRAS1O95057 198 aa-3.9□□□□□ -3.03
RNU6-1340P-201ENST00000384438 SNX4O95219 450 aa-3.9□□□□□ -3.03
RNU6-1340P-201ENST00000384438 FERP16591 822 aa-3.9□□□□□ -3.03
RNU6-1340P-201ENST00000384438 RAB4AP20338 218 aa-3.9□□□□□ -3.03
RNU6-1340P-201ENST00000384438 SAT1P21673 171 aa-3.9□□□□□ -3.03
RNU6-1340P-201ENST00000384438 HIST1H1TP22492 207 aaPredicted RBP-3.9□□□□□ -3.03
RNU6-1340P-201ENST00000384438 CMPK1P30085 196 aa-3.9□□□□□ -3.03
RNU6-1340P-201ENST00000384438 CCR1P32246 355 aa-3.9□□□□□ -3.03
RNU6-1340P-201ENST00000384438 PSMD7P51665 324 aa-3.9□□□□□ -3.03
RNU6-1340P-201ENST00000384438 SSTP61278 116 aa-3.9□□□□□ -3.03
RNU6-1340P-201ENST00000384438 BNIP2Q12982 314 aa-3.9□□□□□ -3.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms