RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 NUP210LQ5VU65 1888 aa10.56□□□□□ -0.72
SRGAP3-202ENST00000383836 TRAV5A0A0B4J249 113 aa10.56□□□□□ -0.72
SRGAP3-202ENST00000383836 TMEM229AB2RXF0 380 aa10.56□□□□□ -0.72
SRGAP3-202ENST00000383836 NBEAP1P0C6P0 100 aa10.56□□□□□ -0.72
SRGAP3-202ENST00000383836 CEACAM1P13688 526 aa10.56□□□□□ -0.72
SRGAP3-202ENST00000383836 PEBP1P30086 187 aaKnown RBP10.56□□□□□ -0.72
SRGAP3-202ENST00000383836 SRSF6Q13247 344 aaKnown RBP10.56□□□□□ -0.72
SRGAP3-202ENST00000383836 PCSK4Q6UW60 755 aa10.56□□□□□ -0.72
SRGAP3-202ENST00000383836 R4GN57 208 aa10.56□□□□□ -0.72
SRGAP3-202ENST00000383836 COL11A2P13942 1736 aaPredicted RBP10.56□□□□□ -0.72
SRGAP3-202ENST00000383836 H3BTX0 84 aa10.56□□□□□ -0.72
SRGAP3-202ENST00000383836 NXPH1P58417 271 aa10.56□□□□□ -0.72
SRGAP3-202ENST00000383836 CIARTQ8N365 385 aaPredicted RBP10.56□□□□□ -0.72
SRGAP3-202ENST00000383836 REG4Q9BYZ8 158 aa10.56□□□□□ -0.72
SRGAP3-202ENST00000383836 TRAV12-3A0A0B4J271 114 aa10.56□□□□□ -0.72
SRGAP3-202ENST00000383836 PF4V1P10720 104 aa10.56□□□□□ -0.72
SRGAP3-202ENST00000383836 TM2D1Q9BX74 207 aa10.56□□□□□ -0.72
SRGAP3-202ENST00000383836 RBMY1BA6NDE4 496 aaKnown RBP10.55□□□□□ -0.72
SRGAP3-202ENST00000383836 RBMY1EA6NEQ0 496 aaKnown RBP10.55□□□□□ -0.72
SRGAP3-202ENST00000383836 RBMY1DP0C7P1 496 aaKnown RBP10.55□□□□□ -0.72
SRGAP3-202ENST00000383836 RBMY1A1P0DJD3 496 aaKnown RBP10.55□□□□□ -0.72
SRGAP3-202ENST00000383836 RBMY1CP0DJD4 496 aa10.55□□□□□ -0.72
SRGAP3-202ENST00000383836 TRBV7-9A0A0J9YWB2 115 aa10.55□□□□□ -0.72
SRGAP3-202ENST00000383836 FOXI3A8MTJ6 420 aaPredicted RBP10.55□□□□□ -0.72
SRGAP3-202ENST00000383836 PYY3Q5JQD4 70 aa10.55□□□□□ -0.72
SRGAP3-202ENST00000383836 CALYQ9NYX4 217 aa10.55□□□□□ -0.72
SRGAP3-202ENST00000383836 IGHV1-69-2A0A0G2JMI3 117 aa10.55□□□□□ -0.72
SRGAP3-202ENST00000383836 CD160O95971 181 aa10.55□□□□□ -0.72
SRGAP3-202ENST00000383836 UCP2P55851 309 aa10.55□□□□□ -0.72
SRGAP3-202ENST00000383836 CACNG7P62955 275 aa10.55□□□□□ -0.72
SRGAP3-202ENST00000383836 CCL20P78556 96 aa10.55□□□□□ -0.72
SRGAP3-202ENST00000383836 JPT1Q9UK76 154 aa10.55□□□□□ -0.72
SRGAP3-202ENST00000383836 IGKV3D-11A0A0A0MRZ8 115 aa10.55□□□□□ -0.72
SRGAP3-202ENST00000383836 TRAV8-1A0A0A6YYK1 113 aa10.55□□□□□ -0.72
SRGAP3-202ENST00000383836 CXCL10P02778 98 aa10.55□□□□□ -0.72
SRGAP3-202ENST00000383836 IGKV3-11P04433 115 aa10.55□□□□□ -0.72
SRGAP3-202ENST00000383836 ACTL10Q5JWF8 245 aa10.55□□□□□ -0.72
SRGAP3-202ENST00000383836 H7C1H1 209 aa10.55□□□□□ -0.72
SRGAP3-202ENST00000383836 LINC01590Q5TEZ4 76 aa10.55□□□□□ -0.72
SRGAP3-202ENST00000383836 TMEM52Q8NDY8 209 aa10.55□□□□□ -0.72
SRGAP3-202ENST00000383836 C18orf12Q96KH6 178 aa10.55□□□□□ -0.72
SRGAP3-202ENST00000383836 FAM106CPP0CH98 169 aa10.55□□□□□ -0.72
SRGAP3-202ENST00000383836 UCP1P25874 307 aa10.55□□□□□ -0.72
SRGAP3-202ENST00000383836 FAM159AQ6UWV7 190 aa10.55□□□□□ -0.72
SRGAP3-202ENST00000383836 TMEM155Q4W5P6 130 aa10.54□□□□□ -0.72
SRGAP3-202ENST00000383836 LY6G6FQ5SQ64 297 aa10.54□□□□□ -0.72
SRGAP3-202ENST00000383836 IGKCP01834 107 aa10.54□□□□□ -0.72
SRGAP3-202ENST00000383836 PSG1P11464 419 aa10.54□□□□□ -0.72
SRGAP3-202ENST00000383836 C3AR1Q16581 482 aa10.54□□□□□ -0.72
SRGAP3-202ENST00000383836 TMEM30BQ3MIR4 351 aa10.54□□□□□ -0.72
SRGAP3-202ENST00000383836 IDI2-AS1Q9NZ38 188 aa10.54□□□□□ -0.72
SRGAP3-202ENST00000383836 NPIPB4C9JG80 1138 aa10.54□□□□□ -0.72
SRGAP3-202ENST00000383836 GDF15Q99988 308 aa10.54□□□□□ -0.72
SRGAP3-202ENST00000383836 A0A1B0GW64 132 aa10.54□□□□□ -0.72
SRGAP3-202ENST00000383836 NPIPB3Q92617 1050 aa10.54□□□□□ -0.72
SRGAP3-202ENST00000383836 PRDM14Q9GZV8 571 aa10.54□□□□□ -0.72
SRGAP3-202ENST00000383836 FSCN3Q9NQT6 498 aa10.54□□□□□ -0.72
SRGAP3-202ENST00000383836 OSTCQ9NRP0 149 aa10.54□□□□□ -0.72
SRGAP3-202ENST00000383836 TRAV24A0A0B4J272 114 aa10.54□□□□□ -0.72
SRGAP3-202ENST00000383836 DDB2Q92466 427 aa10.54□□□□□ -0.72
SRGAP3-202ENST00000383836 COX11Q9Y6N1 276 aa10.54□□□□□ -0.72
SRGAP3-202ENST00000383836 MUC4Q99102 2169 aa10.54□□□□□ -0.72
SRGAP3-202ENST00000383836 SPINK8P0C7L1 97 aa10.54□□□□□ -0.72
SRGAP3-202ENST00000383836 MS4A5Q9H3V2 200 aa10.54□□□□□ -0.72
SRGAP3-202ENST00000383836 A0A0G2JMM0 328 aa10.53□□□□□ -0.72
SRGAP3-202ENST00000383836 A0A1W2PPB8 328 aa10.53□□□□□ -0.72
SRGAP3-202ENST00000383836 KIR3DP1A8MWS1 328 aa10.53□□□□□ -0.72
SRGAP3-202ENST00000383836 C1QTNF9P0C862 333 aa10.53□□□□□ -0.72
SRGAP3-202ENST00000383836 TDGF1P3P51864 188 aa10.53□□□□□ -0.72
SRGAP3-202ENST00000383836 SSBP2P81877 361 aaPredicted RBP10.53□□□□□ -0.72
SRGAP3-202ENST00000383836 ZNF525Q8N782 197 aa10.53□□□□□ -0.72
SRGAP3-202ENST00000383836 GZMBP10144 247 aa10.53□□□□□ -0.72
SRGAP3-202ENST00000383836 UNQ5815/PRO19632Q6UWF5 114 aa10.53□□□□□ -0.72
SRGAP3-202ENST00000383836 SLC25A28Q96A46 364 aa10.53□□□□□ -0.72
SRGAP3-202ENST00000383836 CCL13Q99616 98 aa10.53□□□□□ -0.72
SRGAP3-202ENST00000383836 CNTFRP26992 372 aa10.53□□□□□ -0.72
SRGAP3-202ENST00000383836 FER1L6-AS1Q8NA97 138 aa10.53□□□□□ -0.72
SRGAP3-202ENST00000383836 LHX9Q9NQ69 397 aa10.53□□□□□ -0.72
SRGAP3-202ENST00000383836 MOSP00540 346 aa10.53□□□□□ -0.72
SRGAP3-202ENST00000383836 IGKV1-8A0A0C4DH67 115 aa10.53□□□□□ -0.72
SRGAP3-202ENST00000383836 IGFBP2P18065 325 aa10.53□□□□□ -0.72
SRGAP3-202ENST00000383836 ATP5L2Q7Z4Y8 100 aa10.53□□□□□ -0.72
SRGAP3-202ENST00000383836 TMEM101Q96IK0 257 aa10.53□□□□□ -0.72
SRGAP3-202ENST00000383836 VKORC1Q9BQB6 163 aa10.53□□□□□ -0.72
SRGAP3-202ENST00000383836 RNF182Q8N6D2 247 aa10.53□□□□□ -0.72
SRGAP3-202ENST00000383836 SEMA5BQ9P283 1151 aa10.53□□□□□ -0.72
SRGAP3-202ENST00000383836 LOXL4Q96JB6 756 aa10.52□□□□□ -0.72
SRGAP3-202ENST00000383836 RSPO3Q9BXY4 272 aaPredicted RBP10.52□□□□□ -0.72
SRGAP3-202ENST00000383836 PTPRQQ9UMZ3 2332 aa10.52□□□□□ -0.72
SRGAP3-202ENST00000383836 M0R381 172 aa10.52□□□□□ -0.73
SRGAP3-202ENST00000383836 PLNP26678 52 aa10.52□□□□□ -0.73
SRGAP3-202ENST00000383836 LINC01559Q495D7 138 aa10.52□□□□□ -0.73
SRGAP3-202ENST00000383836 FAM71F2Q6NXP2 309 aa10.52□□□□□ -0.73
SRGAP3-202ENST00000383836 DLX4Q92988 240 aaPredicted RBP10.52□□□□□ -0.73
SRGAP3-202ENST00000383836 NXT2Q9NPJ8 142 aaKnown RBP10.52□□□□□ -0.73
SRGAP3-202ENST00000383836 YAE1D1Q9NRH1 226 aa10.52□□□□□ -0.73
SRGAP3-202ENST00000383836 GHRHP01286 108 aa10.52□□□□□ -0.73
SRGAP3-202ENST00000383836 TMEM186Q96B77 213 aa10.52□□□□□ -0.73
SRGAP3-202ENST00000383836 EDA2RQ9HAV5 297 aa10.52□□□□□ -0.73
SRGAP3-202ENST00000383836 hCG_38984A0A1B0GV85 526 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms