RNA–Protein interactions for RNA: ENST00000381272.5

SMC6-202, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-202ENST00000381272 HIST1H1BP16401 226 aaKnown RBP3.01□□□□□ -1.93
SMC6-202ENST00000381272 VDAC2P45880 294 aaPredicted RBP3.01□□□□□ -1.93
SMC6-202ENST00000381272 GNG10P50151 68 aa3.01□□□□□ -1.93
SMC6-202ENST00000381272 SPCS3P61009 180 aa3.01□□□□□ -1.93
SMC6-202ENST00000381272 ERVK-16P61578 105 aa3.01□□□□□ -1.93
SMC6-202ENST00000381272 DEFA6Q01524 100 aa3.01□□□□□ -1.93
SMC6-202ENST00000381272 C17orf58Q2M2W7 97 aa3.01□□□□□ -1.93
SMC6-202ENST00000381272 PDLIM3Q53GG5 364 aaPredicted RBP3.01□□□□□ -1.93
SMC6-202ENST00000381272 CT45A1Q5HYN5 189 aa3.01□□□□□ -1.93
SMC6-202ENST00000381272 SPATA31B1PQ5VZV4 182 aa3.01□□□□□ -1.93
SMC6-202ENST00000381272 TMEM183AQ8IXX5 376 aa3.01□□□□□ -1.93
SMC6-202ENST00000381272 RPRMLQ8N4K4 120 aa3.01□□□□□ -1.93
SMC6-202ENST00000381272 GCSAMQ8N6F7 178 aa3.01□□□□□ -1.93
SMC6-202ENST00000381272 DEFB108BQ8NET1 73 aa3.01□□□□□ -1.93
SMC6-202ENST00000381272 CT45A3Q8NHU0 189 aa3.01□□□□□ -1.93
SMC6-202ENST00000381272 TMEM170AQ8WVE7 144 aa3.01□□□□□ -1.93
SMC6-202ENST00000381272 ITLN1Q8WWA0 313 aa3.01□□□□□ -1.93
SMC6-202ENST00000381272 FAM122AQ96E09 287 aa3.01□□□□□ -1.93
SMC6-202ENST00000381272 ZNF479Q96JC4 524 aa3.01□□□□□ -1.93
SMC6-202ENST00000381272 YPEL2Q96QA6 119 aa3.01□□□□□ -1.93
SMC6-202ENST00000381272 MGST2Q99735 147 aa3.01□□□□□ -1.93
SMC6-202ENST00000381272 GGTLC1Q9BX51 225 aa3.01□□□□□ -1.93
SMC6-202ENST00000381272 HINT2Q9BX68 163 aa3.01□□□□□ -1.93
SMC6-202ENST00000381272 IFI27L2Q9H2X8 130 aa3.01□□□□□ -1.93
SMC6-202ENST00000381272 HIF1ANQ9NWT6 349 aa3.01□□□□□ -1.93
SMC6-202ENST00000381272 CALYQ9NYX4 217 aa3.01□□□□□ -1.93
SMC6-202ENST00000381272 ZMAT5Q9UDW3 170 aaKnown RBP3.01□□□□□ -1.93
SMC6-202ENST00000381272 JPT1Q9UK76 154 aa3.01□□□□□ -1.93
SMC6-202ENST00000381272 SLC25A15Q9Y619 301 aa3.01□□□□□ -1.93
SMC6-202ENST00000381272 PXMP4Q9Y6I8 212 aa3.01□□□□□ -1.93
SMC6-202ENST00000381272 BOD1L1Q8NFC6 3051 aa3.01□□□□□ -1.93
SMC6-202ENST00000381272 DSCAML1Q8TD84 2053 aa3.01□□□□□ -1.93
SMC6-202ENST00000381272 TANC2Q9HCD6 1990 aa3.01□□□□□ -1.93
SMC6-202ENST00000381272 SVILO95425 2214 aa3.01□□□□□ -1.93
SMC6-202ENST00000381272 BDP1A6H8Y1 2624 aa3.01□□□□□ -1.93
SMC6-202ENST00000381272 A0A1B0GUS0 222 aa3□□□□□ -1.93
SMC6-202ENST00000381272 ZNF705GA8MUZ8 300 aaPredicted RBP3□□□□□ -1.93
SMC6-202ENST00000381272 SRRM5B3KS81 715 aa3□□□□□ -1.93
SMC6-202ENST00000381272 PRSS46E5RG02 174 aa3□□□□□ -1.93
SMC6-202ENST00000381272 F6UZH7 168 aa3□□□□□ -1.93
SMC6-202ENST00000381272 GATCO43716 136 aaKnown RBP3□□□□□ -1.93
SMC6-202ENST00000381272 GGCTO75223 188 aaKnown RBP3□□□□□ -1.93
SMC6-202ENST00000381272 MMP23AO75900 390 aa3□□□□□ -1.93
SMC6-202ENST00000381272 GZMBP10144 247 aa3□□□□□ -1.93
SMC6-202ENST00000381272 IL3RAP26951 378 aa3□□□□□ -1.93
SMC6-202ENST00000381272 SRP14P37108 136 aaKnown RBP3□□□□□ -1.93
SMC6-202ENST00000381272 OPRK1P41145 380 aa3□□□□□ -1.93
SMC6-202ENST00000381272 PCP4P48539 62 aa3□□□□□ -1.93
SMC6-202ENST00000381272 MZT1Q08AG7 82 aa3□□□□□ -1.93
SMC6-202ENST00000381272 ACTL10Q5JWF8 245 aa3□□□□□ -1.93
SMC6-202ENST00000381272 TRAT1Q6PIZ9 186 aa3□□□□□ -1.93
SMC6-202ENST00000381272 IGFL2Q6UWQ7 119 aa3□□□□□ -1.93
SMC6-202ENST00000381272 TCF23Q7RTU1 214 aa3□□□□□ -1.93
SMC6-202ENST00000381272 LINC01551Q86U37 167 aa3□□□□□ -1.93
SMC6-202ENST00000381272 TGIF2LYQ8IUE0 185 aa3□□□□□ -1.93
SMC6-202ENST00000381272 LURAP1LQ8IV03 231 aa3□□□□□ -1.93
SMC6-202ENST00000381272 LYG1Q8N1E2 194 aa3□□□□□ -1.93
SMC6-202ENST00000381272 OCC1Q8TAD7 63 aa3□□□□□ -1.93
SMC6-202ENST00000381272 SNRNP40Q96DI7 357 aaKnown RBP3□□□□□ -1.93
SMC6-202ENST00000381272 C14orf144Q96I85 54 aa3□□□□□ -1.93
SMC6-202ENST00000381272 CCL13Q99616 98 aa3□□□□□ -1.93
SMC6-202ENST00000381272 ASCL3Q9NQ33 180 aa3□□□□□ -1.93
SMC6-202ENST00000381272 KCNIP2Q9NS61 270 aa3□□□□□ -1.93
SMC6-202ENST00000381272 ZNRD1Q9P1U0 126 aa3□□□□□ -1.93
SMC6-202ENST00000381272 TCF19Q9Y242 345 aa3□□□□□ -1.93
SMC6-202ENST00000381272 YTHDF2Q9Y5A9 579 aaKnown RBP3□□□□□ -1.93
SMC6-202ENST00000381272 DYSFO75923 2080 aa3□□□□□ -1.93
SMC6-202ENST00000381272 DMXL1Q9Y485 3027 aa3□□□□□ -1.93
SMC6-202ENST00000381272 TRBV20OR9-2A0A075B6H5 130 aa3□□□□□ -1.93
SMC6-202ENST00000381272 SAA2-SAA4A0A096LPE2 208 aa3□□□□□ -1.93
SMC6-202ENST00000381272 MDFIC2A0A1B0GVS7 189 aa3□□□□□ -1.93
SMC6-202ENST00000381272 A0A1B0GWJ7 208 aa3□□□□□ -1.93
SMC6-202ENST00000381272 SLC17A3O00476 420 aa3□□□□□ -1.93
SMC6-202ENST00000381272 DVL1O14640 695 aa3□□□□□ -1.93
SMC6-202ENST00000381272 RBFOX2O43251 390 aaKnown RBP eCLIP3□□□□□ -1.933e-6■■■■□ 22.3
SMC6-202ENST00000381272 PDE6DO43924 150 aa3□□□□□ -1.93
SMC6-202ENST00000381272 NUPR1O60356 82 aa3□□□□□ -1.93
SMC6-202ENST00000381272 VENTXO95231 258 aa3□□□□□ -1.93
SMC6-202ENST00000381272 CXorf1O96002 111 aa3□□□□□ -1.93
SMC6-202ENST00000381272 CA2P00918 260 aa3□□□□□ -1.93
SMC6-202ENST00000381272 LHBP01229 141 aa3□□□□□ -1.93
SMC6-202ENST00000381272 STAG3L2P0CL84 134 aa3□□□□□ -1.93
SMC6-202ENST00000381272 STAG3L3P0CL85 134 aa3□□□□□ -1.93
SMC6-202ENST00000381272 SAA2P0DJI9 122 aaPredicted RBP3□□□□□ -1.93
SMC6-202ENST00000381272 CGB3P0DN86 165 aa3□□□□□ -1.93
SMC6-202ENST00000381272 CGB7P0DN87 165 aa3□□□□□ -1.93
SMC6-202ENST00000381272 DDTP30046 118 aa3□□□□□ -1.93
SMC6-202ENST00000381272 GCHFRP30047 84 aa3□□□□□ -1.93
SMC6-202ENST00000381272 KLF3P57682 345 aaPredicted RBP3□□□□□ -1.93
SMC6-202ENST00000381272 BPIFB3P59826 476 aa3□□□□□ -1.93
SMC6-202ENST00000381272 PKIAP61925 76 aa3□□□□□ -1.93
SMC6-202ENST00000381272 MRPS11P82912 194 aaKnown RBP3□□□□□ -1.93
SMC6-202ENST00000381272 JOSD1Q15040 202 aaPredicted RBP3□□□□□ -1.93
SMC6-202ENST00000381272 EFNB3Q15768 340 aa3□□□□□ -1.93
SMC6-202ENST00000381272 HLA-DRB5Q30154 266 aa3□□□□□ -1.93
SMC6-202ENST00000381272 AARDQ4LEZ3 155 aa3□□□□□ -1.93
SMC6-202ENST00000381272 DGAT2L7PQ6IED9 249 aa3□□□□□ -1.93
SMC6-202ENST00000381272 OR4A47Q6IF82 309 aa3□□□□□ -1.93
SMC6-202ENST00000381272 KCNIP4Q6PIL6 250 aa3□□□□□ -1.93
SMC6-202ENST00000381272 MOB3BQ86TA1 216 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms