RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 WNT9BO14905 357 aa9.12□□□□□ -0.95
CLCN4-202ENST00000380833 CD160O95971 181 aa9.12□□□□□ -0.95
CLCN4-202ENST00000380833 FAM27E3Q08E93 113 aa9.12□□□□□ -0.95
CLCN4-202ENST00000380833 ANXA2RQ3ZCQ2 193 aa9.12□□□□□ -0.95
CLCN4-202ENST00000380833 KLF17Q5JT82 389 aaPredicted RBP9.12□□□□□ -0.95
CLCN4-202ENST00000380833 INO80CQ6PI98 192 aaPredicted RBP9.12□□□□□ -0.95
CLCN4-202ENST00000380833 MRPL32Q9BYC8 188 aaKnown RBP9.12□□□□□ -0.95
CLCN4-202ENST00000380833 PLNP26678 52 aa9.12□□□□□ -0.95
CLCN4-202ENST00000380833 FOXL1Q12952 345 aa9.12□□□□□ -0.95
CLCN4-202ENST00000380833 Q6AWC8 147 aa9.12□□□□□ -0.95
CLCN4-202ENST00000380833 ABHD12Q8N2K0 398 aa9.12□□□□□ -0.95
CLCN4-202ENST00000380833 MESP1Q9BRJ9 268 aa9.12□□□□□ -0.95
CLCN4-202ENST00000380833 SIRT4Q9Y6E7 314 aaPredicted RBP9.12□□□□□ -0.95
CLCN4-202ENST00000380833 FOXH1O75593 365 aa9.12□□□□□ -0.95
CLCN4-202ENST00000380833 DXOO77932 396 aaKnown RBP9.12□□□□□ -0.95
CLCN4-202ENST00000380833 GZMHP20718 246 aa9.12□□□□□ -0.95
CLCN4-202ENST00000380833 NRN1LQ496H8 165 aa9.12□□□□□ -0.95
CLCN4-202ENST00000380833 GPR82Q96P67 336 aa9.12□□□□□ -0.95
CLCN4-202ENST00000380833 DDX60Q8IY21 1712 aaKnown RBP9.12□□□□□ -0.95
CLCN4-202ENST00000380833 IGHV1-45A0A0A0MS14 117 aa9.11□□□□□ -0.95
CLCN4-202ENST00000380833 IGHV2-26A0A0B4J1V2 119 aa9.11□□□□□ -0.95
CLCN4-202ENST00000380833 RBMY1FQ15415 496 aaKnown RBP9.11□□□□□ -0.95
CLCN4-202ENST00000380833 FDCSPQ8NFU4 85 aa9.11□□□□□ -0.95
CLCN4-202ENST00000380833 ZPLD1Q8TCW7 415 aa9.11□□□□□ -0.95
CLCN4-202ENST00000380833 CHAC1Q9BUX1 264 aa9.11□□□□□ -0.95
CLCN4-202ENST00000380833 ANKRD36CQ5JPF3 1778 aa9.11□□□□□ -0.95
CLCN4-202ENST00000380833 LOC101059948A0A1B0GTJ6 334 aa9.11□□□□□ -0.95
CLCN4-202ENST00000380833 MOSP00540 346 aa9.11□□□□□ -0.95
CLCN4-202ENST00000380833 SRSF7Q16629 238 aaKnown RBP eCLIP9.11□□□□□ -0.95
CLCN4-202ENST00000380833 LILRA6Q6PI73 481 aa9.11□□□□□ -0.95
CLCN4-202ENST00000380833 SLC22A18ASQ8N1D0 253 aa9.11□□□□□ -0.95
CLCN4-202ENST00000380833 STPG4Q8N801 248 aa9.11□□□□□ -0.95
CLCN4-202ENST00000380833 MAP1BP46821 2468 aaKnown RBP9.11□□□□□ -0.95
CLCN4-202ENST00000380833 TRGV2A0A075B6R0 118 aa9.11□□□□□ -0.95
CLCN4-202ENST00000380833 CXorf51AA0A1B0GTR3 108 aa9.11□□□□□ -0.95
CLCN4-202ENST00000380833 KNCNA6PVL3 124 aa9.11□□□□□ -0.95
CLCN4-202ENST00000380833 RND2P52198 227 aa9.11□□□□□ -0.95
CLCN4-202ENST00000380833 APC2O95996 2303 aa9.11□□□□□ -0.95
CLCN4-202ENST00000380833 A4D1N5 150 aa9.11□□□□□ -0.95
CLCN4-202ENST00000380833 VWC2LB2RUY7 222 aa9.11□□□□□ -0.95
CLCN4-202ENST00000380833 SYS1-DBNDD2H3BUS1 97 aa9.11□□□□□ -0.95
CLCN4-202ENST00000380833 NPC2P61916 151 aa9.11□□□□□ -0.95
CLCN4-202ENST00000380833 TMEM187Q14656 261 aa9.11□□□□□ -0.95
CLCN4-202ENST00000380833 IFI27L1Q96BM0 104 aa9.11□□□□□ -0.95
CLCN4-202ENST00000380833 LINC01587Q99440 93 aa9.11□□□□□ -0.95
CLCN4-202ENST00000380833 SCN11AQ9UI33 1791 aa9.11□□□□□ -0.95
CLCN4-202ENST00000380833 RPL36A-HNRNPH2H7BZ11 118 aa9.11□□□□□ -0.95
CLCN4-202ENST00000380833 UTF1Q5T230 341 aa9.11□□□□□ -0.95
CLCN4-202ENST00000380833 LCN12Q6JVE5 192 aa9.11□□□□□ -0.95
CLCN4-202ENST00000380833 FAM214BQ7L5A3 538 aa9.11□□□□□ -0.95
CLCN4-202ENST00000380833 C7orf69Q9H7B7 122 aa9.11□□□□□ -0.95
CLCN4-202ENST00000380833 MRPL27Q9P0M9 148 aaKnown RBP9.11□□□□□ -0.95
CLCN4-202ENST00000380833 TCTEX1D4Q5JR98 221 aa9.1□□□□□ -0.95
CLCN4-202ENST00000380833 DRAM1Q8N682 238 aa9.1□□□□□ -0.95
CLCN4-202ENST00000380833 OR9G1Q8NH87 305 aa9.1□□□□□ -0.95
CLCN4-202ENST00000380833 OVOL2Q9BRP0 275 aa9.1□□□□□ -0.95
CLCN4-202ENST00000380833 A0A1W2PS18 150 aa9.1□□□□□ -0.95
CLCN4-202ENST00000380833 PSG4Q00888 419 aa9.1□□□□□ -0.95
CLCN4-202ENST00000380833 ZP4Q12836 540 aa9.1□□□□□ -0.95
CLCN4-202ENST00000380833 FAM90A2PQ658T7 463 aa9.1□□□□□ -0.95
CLCN4-202ENST00000380833 RNF125Q96EQ8 232 aa9.1□□□□□ -0.95
CLCN4-202ENST00000380833 SF3B5Q9BWJ5 86 aaKnown RBP9.1□□□□□ -0.95
CLCN4-202ENST00000380833 J3QT63 122 aa9.1□□□□□ -0.95
CLCN4-202ENST00000380833 CD69Q07108 199 aa9.1□□□□□ -0.95
CLCN4-202ENST00000380833 PHLDA1Q8WV24 401 aaPredicted RBP9.1□□□□□ -0.95
CLCN4-202ENST00000380833 SCNM1Q9BWG6 230 aa9.1□□□□□ -0.95
CLCN4-202ENST00000380833 CENPVL1A0A0U1RR11 272 aa9.1□□□□□ -0.95
CLCN4-202ENST00000380833 HIGD1CA8MV81 97 aa9.1□□□□□ -0.95
CLCN4-202ENST00000380833 SCTP09683 121 aa9.1□□□□□ -0.95
CLCN4-202ENST00000380833 SYNJ2BPP57105 145 aa9.1□□□□□ -0.95
CLCN4-202ENST00000380833 C15orf53Q8NAA6 179 aa9.1□□□□□ -0.95
CLCN4-202ENST00000380833 OSTCQ9NRP0 149 aa9.1□□□□□ -0.95
CLCN4-202ENST00000380833 CALYQ9NYX4 217 aa9.1□□□□□ -0.95
CLCN4-202ENST00000380833 LINC00527Q9UJ94 153 aa9.1□□□□□ -0.95
CLCN4-202ENST00000380833 U3KQE9 123 aa9.1□□□□□ -0.95
CLCN4-202ENST00000380833 FSTP19883 344 aa9.1□□□□□ -0.95
CLCN4-202ENST00000380833 LIMS2Q7Z4I7 341 aa9.1□□□□□ -0.95
CLCN4-202ENST00000380833 LYPD6BQ8NI32 183 aa9.1□□□□□ -0.95
CLCN4-202ENST00000380833 CACNA1GO43497 2377 aa9.1□□□□□ -0.95
CLCN4-202ENST00000380833 AHRRA9YTQ3 701 aa9.1□□□□□ -0.95
CLCN4-202ENST00000380833 M0R381 172 aa9.1□□□□□ -0.95
CLCN4-202ENST00000380833 SYNGR3O43761 229 aa9.1□□□□□ -0.95
CLCN4-202ENST00000380833 CD33P20138 364 aa9.1□□□□□ -0.95
CLCN4-202ENST00000380833 GAS1P54826 345 aa9.1□□□□□ -0.95
CLCN4-202ENST00000380833 BHLHA9Q7RTU4 235 aa9.1□□□□□ -0.95
CLCN4-202ENST00000380833 AMN1Q8IY45 258 aa9.1□□□□□ -0.95
CLCN4-202ENST00000380833 FAM168AQ92567 244 aa9.1□□□□□ -0.95
CLCN4-202ENST00000380833 TDRD6O60522 2096 aaKnown RBP9.09□□□□□ -0.95
CLCN4-202ENST00000380833 CTSBP07858 339 aa9.09□□□□□ -0.95
CLCN4-202ENST00000380833 RNASE4P34096 147 aaKnown RBP9.09□□□□□ -0.95
CLCN4-202ENST00000380833 SHISA5Q8N114 240 aa9.09□□□□□ -0.95
CLCN4-202ENST00000380833 ARPC1AQ92747 370 aa9.09□□□□□ -0.95
CLCN4-202ENST00000380833 SPATA25Q9BR10 227 aa9.09□□□□□ -0.95
CLCN4-202ENST00000380833 A0A1B0GTI1 187 aa9.09□□□□□ -0.95
CLCN4-202ENST00000380833 ATP5G3P48201 142 aa9.09□□□□□ -0.95
CLCN4-202ENST00000380833 RNF182Q8N6D2 247 aa9.09□□□□□ -0.95
CLCN4-202ENST00000380833 RPL8P62917 257 aaKnown RBP9.09□□□□□ -0.95
CLCN4-202ENST00000380833 ATP5L2Q7Z4Y8 100 aa9.09□□□□□ -0.95
CLCN4-202ENST00000380833 PEBP1P30086 187 aaKnown RBP9.09□□□□□ -0.95
CLCN4-202ENST00000380833 ASIPP42127 132 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms