RNA–Protein interactions for RNA: ENST00000380265.9

HERC6-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HERC6, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-203ENST00000380265 NEUROG1Q92886 237 aa10.03□□□□□ -0.8
HERC6-203ENST00000380265 LINC00470Q9BZP3 86 aa10.03□□□□□ -0.8
HERC6-203ENST00000380265 TNCP24821 2201 aa10.03□□□□□ -0.8
HERC6-203ENST00000380265 FRYLO94915 3013 aa10.03□□□□□ -0.8
HERC6-203ENST00000380265 A0A087X0K7 114 aa10.03□□□□□ -0.8
HERC6-203ENST00000380265 SLC35E4Q6ICL7 350 aa10.03□□□□□ -0.8
HERC6-203ENST00000380265 SMRP1Q8NCR6 262 aa10.03□□□□□ -0.8
HERC6-203ENST00000380265 NUDT11Q96G61 164 aa10.03□□□□□ -0.8
HERC6-203ENST00000380265 OR2V2Q96R30 315 aa10.03□□□□□ -0.8
HERC6-203ENST00000380265 MRPL27Q9P0M9 148 aaKnown RBP10.03□□□□□ -0.8
HERC6-203ENST00000380265 KIAA1549Q9HCM3 1950 aa10.03□□□□□ -0.8
HERC6-203ENST00000380265 FRYQ5TBA9 3013 aa10.03□□□□□ -0.8
HERC6-203ENST00000380265 LEPROTL1O95214 131 aa10.03□□□□□ -0.8
HERC6-203ENST00000380265 VDAC2P45880 294 aaPredicted RBP10.03□□□□□ -0.8
HERC6-203ENST00000380265 FABP6P51161 128 aa10.03□□□□□ -0.8
HERC6-203ENST00000380265 LINC00696Q6ZRV3 163 aa10.03□□□□□ -0.8
HERC6-203ENST00000380265 GAGE12BA1L429 117 aa10.02□□□□□ -0.8
HERC6-203ENST00000380265 HIGD1CA8MV81 97 aa10.02□□□□□ -0.8
HERC6-203ENST00000380265 ERVK11-1P61568 191 aa10.02□□□□□ -0.8
HERC6-203ENST00000380265 C12orf54Q6X4T0 127 aa10.02□□□□□ -0.8
HERC6-203ENST00000380265 Q6ZR03 302 aa10.02□□□□□ -0.8
HERC6-203ENST00000380265 TMEM191AQ9H0A3 160 aa10.02□□□□□ -0.8
HERC6-203ENST00000380265 TRAV5A0A0B4J249 113 aa10.02□□□□□ -0.81
HERC6-203ENST00000380265 CORTO00230 105 aa10.02□□□□□ -0.81
HERC6-203ENST00000380265 TIMM8AO60220 97 aaPredicted RBP10.02□□□□□ -0.81
HERC6-203ENST00000380265 REG1AP05451 166 aa10.02□□□□□ -0.81
HERC6-203ENST00000380265 ARG2P78540 354 aa10.02□□□□□ -0.81
HERC6-203ENST00000380265 NUP35Q8NFH5 326 aa10.02□□□□□ -0.81
HERC6-203ENST00000380265 TAX1BP3O14907 124 aa10.02□□□□□ -0.81
HERC6-203ENST00000380265 IL11RAQ14626 422 aa10.02□□□□□ -0.81
HERC6-203ENST00000380265 LINC00173Q6ZV60 143 aa10.02□□□□□ -0.81
HERC6-203ENST00000380265 SMIM27A0A1W2PRY6 76 aa10.01□□□□□ -0.81
HERC6-203ENST00000380265 PSG9Q00887 426 aa10.01□□□□□ -0.81
HERC6-203ENST00000380265 MLANAQ16655 118 aa10.01□□□□□ -0.81
HERC6-203ENST00000380265 NAA38Q9BRA0 125 aaKnown RBP10.01□□□□□ -0.81
HERC6-203ENST00000380265 AMMECR1Q9Y4X0 333 aaPredicted RBP10.01□□□□□ -0.81
HERC6-203ENST00000380265 HCFC1P51610 2035 aa10.01□□□□□ -0.81
HERC6-203ENST00000380265 ABCA1O95477 2261 aa10.01□□□□□ -0.81
HERC6-203ENST00000380265 H0YJW9 148 aa10.01□□□□□ -0.81
HERC6-203ENST00000380265 PLAUP00749 431 aa10.01□□□□□ -0.81
HERC6-203ENST00000380265 PPOXP50336 477 aa10.01□□□□□ -0.81
HERC6-203ENST00000380265 TCF24Q7RTU0 167 aa10.01□□□□□ -0.81
HERC6-203ENST00000380265 SPATA12Q7Z6I5 190 aa10.01□□□□□ -0.81
HERC6-203ENST00000380265 Q8TCH9 128 aa10.01□□□□□ -0.81
HERC6-203ENST00000380265 SNRNP40Q96DI7 357 aaKnown RBP10.01□□□□□ -0.81
HERC6-203ENST00000380265 LSM4Q9Y4Z0 139 aaKnown RBP10.01□□□□□ -0.81
HERC6-203ENST00000380265 GAGE10A6NGK3 116 aa10.01□□□□□ -0.81
HERC6-203ENST00000380265 PPBPP02775 128 aa10.01□□□□□ -0.81
HERC6-203ENST00000380265 TBR1Q16650 682 aa10.01□□□□□ -0.81
HERC6-203ENST00000380265 BVES-AS1Q5T3Y7 98 aa10.01□□□□□ -0.81
HERC6-203ENST00000380265 ABHD17BQ5VST6 288 aa10.01□□□□□ -0.81
HERC6-203ENST00000380265 WDR31Q8NA23 367 aa10.01□□□□□ -0.81
HERC6-203ENST00000380265 PPIAL4DF5H284 164 aa10□□□□□ -0.81
HERC6-203ENST00000380265 LYZL6O75951 148 aa10□□□□□ -0.81
HERC6-203ENST00000380265 IGHV3-48P01763 117 aa10□□□□□ -0.81
HERC6-203ENST00000380265 SRFP11831 508 aa10□□□□□ -0.81
HERC6-203ENST00000380265 Q0VFX4 171 aa10□□□□□ -0.81
HERC6-203ENST00000380265 ABI3Q9P2A4 366 aa10□□□□□ -0.81
HERC6-203ENST00000380265 IGKV3D-15A0A087WSY6 115 aa10□□□□□ -0.81
HERC6-203ENST00000380265 GOSR1O95249 250 aa10□□□□□ -0.81
HERC6-203ENST00000380265 HSPE1P61604 102 aaKnown RBP10□□□□□ -0.81
HERC6-203ENST00000380265 EIF4EBP1Q13541 118 aaPredicted RBP10□□□□□ -0.81
HERC6-203ENST00000380265 OR4S2Q8NH73 311 aa10□□□□□ -0.81
HERC6-203ENST00000380265 OR9G1Q8NH87 305 aa10□□□□□ -0.81
HERC6-203ENST00000380265 BLNKQ8WV28 456 aa10□□□□□ -0.81
HERC6-203ENST00000380265 MRPS17Q9Y2R5 130 aaKnown RBP10□□□□□ -0.81
HERC6-203ENST00000380265 SAP30O75446 220 aa10□□□□□ -0.81
HERC6-203ENST00000380265 ADH4P08319 380 aa10□□□□□ -0.81
HERC6-203ENST00000380265 C8orf88P0DMB2 117 aa10□□□□□ -0.81
HERC6-203ENST00000380265 PYYP10082 97 aa10□□□□□ -0.81
HERC6-203ENST00000380265 MPV17P39210 176 aa10□□□□□ -0.81
HERC6-203ENST00000380265 ZNF138P52744 262 aa10□□□□□ -0.81
HERC6-203ENST00000380265 SMIM21Q3B7S5 101 aa10□□□□□ -0.81
HERC6-203ENST00000380265 TMEM251Q8N6I4 163 aa10□□□□□ -0.81
HERC6-203ENST00000380265 CHRDL1Q9BU40 450 aa10□□□□□ -0.81
HERC6-203ENST00000380265 C2orf70A6NJV1 201 aa9.99□□□□□ -0.81
HERC6-203ENST00000380265 J3QR06 171 aa9.99□□□□□ -0.81
HERC6-203ENST00000380265 SMPD2O60906 423 aa9.99□□□□□ -0.81
HERC6-203ENST00000380265 SS18L1O75177 396 aaPredicted RBP9.99□□□□□ -0.81
HERC6-203ENST00000380265 GDF5OSQ5U4N7 250 aa9.99□□□□□ -0.81
HERC6-203ENST00000380265 LRRC29Q8WV35 223 aa9.99□□□□□ -0.81
HERC6-203ENST00000380265 CSTL1Q9H114 145 aa9.99□□□□□ -0.81
HERC6-203ENST00000380265 FNDC4Q9H6D8 234 aaPredicted RBP9.99□□□□□ -0.81
HERC6-203ENST00000380265 ST20Q9HBF5 79 aa9.99□□□□□ -0.81
HERC6-203ENST00000380265 HES4Q9HCC6 221 aa9.99□□□□□ -0.81
HERC6-203ENST00000380265 CHEK1O14757 476 aa9.99□□□□□ -0.81
HERC6-203ENST00000380265 ACP7Q6ZNF0 438 aa9.99□□□□□ -0.81
HERC6-203ENST00000380265 FAM214BQ7L5A3 538 aa9.99□□□□□ -0.81
HERC6-203ENST00000380265 C1orf159Q96HA4 380 aa9.99□□□□□ -0.81
HERC6-203ENST00000380265 COMMD5Q9GZQ3 224 aa9.99□□□□□ -0.81
HERC6-203ENST00000380265 OR51B2Q9Y5P1 312 aa9.99□□□□□ -0.81
HERC6-203ENST00000380265 SYS1-DBNDD2H3BUS1 97 aa9.99□□□□□ -0.81
HERC6-203ENST00000380265 PROP1O75360 226 aa9.99□□□□□ -0.81
HERC6-203ENST00000380265 GNG5P63218 68 aa9.99□□□□□ -0.81
HERC6-203ENST00000380265 PGLYRP4Q96LB8 373 aa9.99□□□□□ -0.81
HERC6-203ENST00000380265 MAP1LC3CQ9BXW4 147 aa9.99□□□□□ -0.81
HERC6-203ENST00000380265 DEFB127Q9H1M4 99 aa9.99□□□□□ -0.81
HERC6-203ENST00000380265 SLC25A10Q9UBX3 287 aaPredicted RBP9.99□□□□□ -0.81
HERC6-203ENST00000380265 IGHV3OR15-7A0A075B7D8 119 aa9.98□□□□□ -0.81
HERC6-203ENST00000380265 COX7A2P2O60397 106 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms