RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 RNF212Q495C1 297 aa6.61□□□□□ -1.35
CKAP2-203ENST00000378037 ASCL4Q6XD76 172 aa6.61□□□□□ -1.35
CKAP2-203ENST00000378037 ZNF788Q6ZQV5 615 aa6.61□□□□□ -1.35
CKAP2-203ENST00000378037 NEIL1Q96FI4 390 aaPredicted RBP6.61□□□□□ -1.35
CKAP2-203ENST00000378037 LURAP1Q96LR2 239 aa6.61□□□□□ -1.35
CKAP2-203ENST00000378037 P2RX4Q99571 388 aa6.61□□□□□ -1.35
CKAP2-203ENST00000378037 SLC25A33Q9BSK2 321 aa6.61□□□□□ -1.35
CKAP2-203ENST00000378037 SRD5A3Q9H8P0 318 aa6.61□□□□□ -1.35
CKAP2-203ENST00000378037 RPUSD1Q9UJJ7 312 aaKnown RBP6.61□□□□□ -1.35
CKAP2-203ENST00000378037 WASHC3Q9Y3C0 194 aa6.61□□□□□ -1.35
CKAP2-203ENST00000378037 NBEAL2Q6ZNJ1 2754 aa6.61□□□□□ -1.35
CKAP2-203ENST00000378037 E7EUB6 86 aa6.61□□□□□ -1.35
CKAP2-203ENST00000378037 PROP1O75360 226 aa6.61□□□□□ -1.35
CKAP2-203ENST00000378037 AMY1AP04745 511 aa6.61□□□□□ -1.35
CKAP2-203ENST00000378037 LIPFP07098 398 aa6.61□□□□□ -1.35
CKAP2-203ENST00000378037 FCGR2BP31994 310 aaPredicted RBP6.61□□□□□ -1.35
CKAP2-203ENST00000378037 TDGF1P3P51864 188 aa6.61□□□□□ -1.35
CKAP2-203ENST00000378037 SUB1P53999 127 aaKnown RBP eCLIP6.61□□□□□ -1.35
CKAP2-203ENST00000378037 PAX9P55771 341 aa6.61□□□□□ -1.35
CKAP2-203ENST00000378037 FABP9Q0Z7S8 132 aa6.61□□□□□ -1.35
CKAP2-203ENST00000378037 C17orf58Q2M2W7 97 aa6.61□□□□□ -1.35
CKAP2-203ENST00000378037 IGF2-ASQ6U949 168 aa6.61□□□□□ -1.35
CKAP2-203ENST00000378037 UNQ5815/PRO19632Q6UWF5 114 aa6.61□□□□□ -1.35
CKAP2-203ENST00000378037 SLC35E3Q7Z769 313 aa6.61□□□□□ -1.35
CKAP2-203ENST00000378037 LINC00518Q8N0U6 118 aa6.61□□□□□ -1.35
CKAP2-203ENST00000378037 OR4C13Q8NGP0 309 aa6.61□□□□□ -1.35
CKAP2-203ENST00000378037 NUDT16L1Q9BRJ7 211 aaKnown RBP6.61□□□□□ -1.35
CKAP2-203ENST00000378037 ELOVL1Q9BW60 279 aa6.61□□□□□ -1.35
CKAP2-203ENST00000378037 TUBD1Q9UJT1 453 aa6.61□□□□□ -1.35
CKAP2-203ENST00000378037 OR2T8A6NH00 312 aa6.61□□□□□ -1.35
CKAP2-203ENST00000378037 ZNF729A6NN14 1252 aaPredicted RBP6.61□□□□□ -1.35
CKAP2-203ENST00000378037 F6UZH7 168 aa6.61□□□□□ -1.35
CKAP2-203ENST00000378037 SPCS3P61009 180 aa6.61□□□□□ -1.35
CKAP2-203ENST00000378037 ZNF66Q6ZN08 573 aa6.61□□□□□ -1.35
CKAP2-203ENST00000378037 DNM1P46Q6ZS02 220 aa6.61□□□□□ -1.35
CKAP2-203ENST00000378037 OR8I2Q8N0Y5 310 aa6.61□□□□□ -1.35
CKAP2-203ENST00000378037 NANPQ8TBE9 248 aa6.61□□□□□ -1.35
CKAP2-203ENST00000378037 PHYHIPLQ96FC7 376 aa6.61□□□□□ -1.35
CKAP2-203ENST00000378037 BARX1Q9HBU1 254 aaPredicted RBP6.61□□□□□ -1.35
CKAP2-203ENST00000378037 PLSCR2Q9NRY7 297 aa6.61□□□□□ -1.35
CKAP2-203ENST00000378037 IGHV2-26A0A0B4J1V2 119 aa6.6□□□□□ -1.35
CKAP2-203ENST00000378037 SCO2A0A1W2PP80 73 aa6.6□□□□□ -1.35
CKAP2-203ENST00000378037 A0A1W2PRX2 142 aa6.6□□□□□ -1.35
CKAP2-203ENST00000378037 PPP5D1E7EU14 171 aa6.6□□□□□ -1.35
CKAP2-203ENST00000378037 CEACAM4O75871 244 aa6.6□□□□□ -1.35
CKAP2-203ENST00000378037 TRGC2P03986 189 aa6.6□□□□□ -1.35
CKAP2-203ENST00000378037 IGHV1-8P0DP01 117 aa6.6□□□□□ -1.35
CKAP2-203ENST00000378037 HAPLN4Q86UW8 402 aa6.6□□□□□ -1.35
CKAP2-203ENST00000378037 MALSU1Q96EH3 234 aa6.6□□□□□ -1.35
CKAP2-203ENST00000378037 NIT2Q9NQR4 276 aa6.6□□□□□ -1.35
CKAP2-203ENST00000378037 A0A1W2PN81 502 aa6.6□□□□□ -1.35
CKAP2-203ENST00000378037 ZNF705FA8MVS1 300 aaPredicted RBP6.6□□□□□ -1.35
CKAP2-203ENST00000378037 HOXD4P09016 255 aaPredicted RBP6.6□□□□□ -1.35
CKAP2-203ENST00000378037 ZNF705DP0CH99 300 aaPredicted RBP6.6□□□□□ -1.35
CKAP2-203ENST00000378037 ZNF705BP0CI00 300 aaPredicted RBP6.6□□□□□ -1.35
CKAP2-203ENST00000378037 BCL2P10415 239 aa6.6□□□□□ -1.35
CKAP2-203ENST00000378037 SSBP2P81877 361 aaPredicted RBP6.6□□□□□ -1.35
CKAP2-203ENST00000378037 USF2Q15853 346 aaPredicted RBP6.6□□□□□ -1.35
CKAP2-203ENST00000378037 TMEM41BQ5BJD5 291 aa6.6□□□□□ -1.35
CKAP2-203ENST00000378037 DAZAP1Q96EP5 407 aaKnown RBP6.6□□□□□ -1.35
CKAP2-203ENST00000378037 NABP2Q9BQ15 211 aa6.6□□□□□ -1.35
CKAP2-203ENST00000378037 TMEM133Q9H2Q1 129 aa6.6□□□□□ -1.35
CKAP2-203ENST00000378037 NPVFQ9HCQ7 196 aa6.6□□□□□ -1.35
CKAP2-203ENST00000378037 PTPRBP23467 1997 aa6.6□□□□□ -1.35
CKAP2-203ENST00000378037 NIPBLQ6KC79 2804 aaeCLIP6.6□□□□□ -1.35
CKAP2-203ENST00000378037 TRAV8-1A0A0A6YYK1 113 aa6.59□□□□□ -1.35
CKAP2-203ENST00000378037 GRIFINA4D1Z8 144 aa6.59□□□□□ -1.35
CKAP2-203ENST00000378037 ZNF785A8K8V0 405 aa6.59□□□□□ -1.35
CKAP2-203ENST00000378037 MT-ND4LP03901 98 aa6.59□□□□□ -1.35
CKAP2-203ENST00000378037 IL4P05112 153 aa6.59□□□□□ -1.35
CKAP2-203ENST00000378037 LOXP28300 417 aaPredicted RBP6.59□□□□□ -1.35
CKAP2-203ENST00000378037 GPR183P32249 361 aa6.59□□□□□ -1.35
CKAP2-203ENST00000378037 PDLIM4P50479 330 aa6.59□□□□□ -1.35
CKAP2-203ENST00000378037 MRPL41Q8IXM3 137 aaKnown RBP6.59□□□□□ -1.35
CKAP2-203ENST00000378037 IMMP2LQ96T52 175 aa6.59□□□□□ -1.35
CKAP2-203ENST00000378037 RASL11BQ9BPW5 248 aa6.59□□□□□ -1.35
CKAP2-203ENST00000378037 SAMD10Q9BYL1 202 aa6.59□□□□□ -1.35
CKAP2-203ENST00000378037 IFT22Q9H7X7 185 aa6.59□□□□□ -1.35
CKAP2-203ENST00000378037 MBNL3Q9NUK0 354 aaKnown RBP6.59□□□□□ -1.35
CKAP2-203ENST00000378037 LINC00312Q9Y6C7 94 aa6.59□□□□□ -1.35
CKAP2-203ENST00000378037 SERTM2A0A1B0GWG4 89 aa6.59□□□□□ -1.35
CKAP2-203ENST00000378037 IL6RP08887 468 aaPredicted RBP6.59□□□□□ -1.35
CKAP2-203ENST00000378037 MEF2BQ02080 365 aaPredicted RBP6.59□□□□□ -1.35
CKAP2-203ENST00000378037 TMEM241Q24JQ0 296 aa6.59□□□□□ -1.35
CKAP2-203ENST00000378037 BSXQ3C1V8 233 aa6.59□□□□□ -1.35
CKAP2-203ENST00000378037 PQLC2Q6ZP29 291 aa6.59□□□□□ -1.35
CKAP2-203ENST00000378037 FAM168AQ92567 244 aa6.59□□□□□ -1.35
CKAP2-203ENST00000378037 GINS3Q9BRX5 216 aa6.59□□□□□ -1.35
CKAP2-203ENST00000378037 REG4Q9BYZ8 158 aa6.59□□□□□ -1.35
CKAP2-203ENST00000378037 TECRQ9NZ01 308 aaKnown RBP6.59□□□□□ -1.35
CKAP2-203ENST00000378037 PRNDQ9UKY0 176 aa6.59□□□□□ -1.35
CKAP2-203ENST00000378037 FUT9Q9Y231 359 aa6.59□□□□□ -1.35
CKAP2-203ENST00000378037 G3V318 75 aa6.59□□□□□ -1.35
CKAP2-203ENST00000378037 C15orf65H3BRN8 121 aa6.59□□□□□ -1.35
CKAP2-203ENST00000378037 SIAH2O43255 324 aa6.59□□□□□ -1.35
CKAP2-203ENST00000378037 CD33P20138 364 aa6.59□□□□□ -1.35
CKAP2-203ENST00000378037 AGMATQ9BSE5 352 aa6.59□□□□□ -1.35
CKAP2-203ENST00000378037 PARLQ9H300 379 aa6.59□□□□□ -1.35
CKAP2-203ENST00000378037 CLN5O75503 358 aa6.58□□□□□ -1.36
CKAP2-203ENST00000378037 COX6B1P14854 86 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms