RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 ADAP1O75689 374 aa10.18□□□□□ -0.78
CKAP2-202ENST00000378034 RNASE2P10153 161 aaKnown RBP10.18□□□□□ -0.78
CKAP2-202ENST00000378034 SLURP1P55000 103 aa10.18□□□□□ -0.78
CKAP2-202ENST00000378034 ATP5IP56385 69 aaPredicted RBP10.18□□□□□ -0.78
CKAP2-202ENST00000378034 TATDN3Q17R31 274 aa10.18□□□□□ -0.78
CKAP2-202ENST00000378034 DCUN1D4Q92564 292 aa10.18□□□□□ -0.78
CKAP2-202ENST00000378034 CCDC140Q96MF4 163 aa10.18□□□□□ -0.78
CKAP2-202ENST00000378034 SEC22CQ9BRL7 303 aa10.18□□□□□ -0.78
CKAP2-202ENST00000378034 MARVELD1Q9BSK0 173 aa10.18□□□□□ -0.78
CKAP2-202ENST00000378034 RBKSQ9H477 322 aa10.18□□□□□ -0.78
CKAP2-202ENST00000378034 GPN1Q9HCN4 374 aaPredicted RBP10.18□□□□□ -0.78
CKAP2-202ENST00000378034 GAR1Q9NY12 217 aaKnown RBP10.18□□□□□ -0.78
CKAP2-202ENST00000378034 INMT-MINDY4F8WBC2 141 aa10.17□□□□□ -0.78
CKAP2-202ENST00000378034 K7EIM0 57 aa10.17□□□□□ -0.78
CKAP2-202ENST00000378034 OVOL1O14753 267 aa10.17□□□□□ -0.78
CKAP2-202ENST00000378034 GGCTO75223 188 aaKnown RBP10.17□□□□□ -0.78
CKAP2-202ENST00000378034 LY86O95711 162 aa10.17□□□□□ -0.78
CKAP2-202ENST00000378034 TRBV12-3P01733 135 aa10.17□□□□□ -0.78
CKAP2-202ENST00000378034 KLF5Q13887 457 aaPredicted RBP10.17□□□□□ -0.78
CKAP2-202ENST00000378034 RPEL1Q2QD12 228 aa10.17□□□□□ -0.78
CKAP2-202ENST00000378034 C2orf83Q53S99 150 aa10.17□□□□□ -0.78
CKAP2-202ENST00000378034 SAMD5Q5TGI4 173 aa10.17□□□□□ -0.78
CKAP2-202ENST00000378034 CLEC19AQ6UXS0 136 aa10.17□□□□□ -0.78
CKAP2-202ENST00000378034 C12orf45Q8N5I9 185 aaPredicted RBP10.17□□□□□ -0.78
CKAP2-202ENST00000378034 DTD1Q8TEA8 209 aa10.17□□□□□ -0.78
CKAP2-202ENST00000378034 SCARB1Q8WTV0 552 aa10.17□□□□□ -0.78
CKAP2-202ENST00000378034 DLX4Q92988 240 aaPredicted RBP10.17□□□□□ -0.78
CKAP2-202ENST00000378034 MISP3Q96FF7 219 aa10.17□□□□□ -0.78
CKAP2-202ENST00000378034 TXN2Q99757 166 aa10.17□□□□□ -0.78
CKAP2-202ENST00000378034 C21orf62Q9NYP8 219 aa10.17□□□□□ -0.78
CKAP2-202ENST00000378034 U3KQ87 197 aa10.17□□□□□ -0.78
CKAP2-202ENST00000378034 I3L2K1 104 aa10.17□□□□□ -0.78
CKAP2-202ENST00000378034 BMPR1BO00238 502 aa10.17□□□□□ -0.78
CKAP2-202ENST00000378034 IGLL1P15814 213 aa10.17□□□□□ -0.78
CKAP2-202ENST00000378034 FCGR2BP31994 310 aaPredicted RBP10.17□□□□□ -0.78
CKAP2-202ENST00000378034 SLC24A4Q8NFF2 622 aa10.17□□□□□ -0.78
CKAP2-202ENST00000378034 SNRPGP15A8MWD9 76 aa10.16□□□□□ -0.78
CKAP2-202ENST00000378034 NXPH3O95157 252 aa10.16□□□□□ -0.78
CKAP2-202ENST00000378034 PTTG1O95997 202 aa10.16□□□□□ -0.78
CKAP2-202ENST00000378034 CLEC3BP05452 202 aa10.16□□□□□ -0.78
CKAP2-202ENST00000378034 ARL3P36405 182 aa10.16□□□□□ -0.78
CKAP2-202ENST00000378034 C9orf66Q5T8R8 295 aa10.16□□□□□ -0.78
CKAP2-202ENST00000378034 CIB3Q96Q77 187 aaPredicted RBP10.16□□□□□ -0.78
CKAP2-202ENST00000378034 WIPF1O43516 503 aa10.15□□□□□ -0.78
CKAP2-202ENST00000378034 MT-CO2P00403 227 aa10.15□□□□□ -0.78
CKAP2-202ENST00000378034 IGHV3-23P01764 117 aa10.15□□□□□ -0.78
CKAP2-202ENST00000378034 INSL3P51460 131 aa10.15□□□□□ -0.78
CKAP2-202ENST00000378034 MFAP4P55083 255 aa10.15□□□□□ -0.78
CKAP2-202ENST00000378034 ID3Q02535 119 aa10.15□□□□□ -0.78
CKAP2-202ENST00000378034 SPSB3Q6PJ21 355 aa10.15□□□□□ -0.78
CKAP2-202ENST00000378034 C1QL4Q86Z23 238 aa10.15□□□□□ -0.78
CKAP2-202ENST00000378034 RNASEH2CQ8TDP1 164 aaKnown RBP10.15□□□□□ -0.78
CKAP2-202ENST00000378034 BSCL2Q96G97 398 aaPredicted RBP10.15□□□□□ -0.78
CKAP2-202ENST00000378034 ELOVL1Q9BW60 279 aa10.15□□□□□ -0.78
CKAP2-202ENST00000378034 S4R3C0 116 aa10.15□□□□□ -0.78
CKAP2-202ENST00000378034 SEC14L6B5MCN3 397 aa10.15□□□□□ -0.78
CKAP2-202ENST00000378034 PPP5D1E7EU14 171 aa10.15□□□□□ -0.78
CKAP2-202ENST00000378034 G3V4G9 280 aa10.15□□□□□ -0.78
CKAP2-202ENST00000378034 SYNGR2O43760 224 aa10.15□□□□□ -0.78
CKAP2-202ENST00000378034 NPY1RP25929 384 aa10.15□□□□□ -0.78
CKAP2-202ENST00000378034 IAH1Q2TAA2 248 aaPredicted RBP10.15□□□□□ -0.78
CKAP2-202ENST00000378034 OXLD1Q5BKU9 147 aa10.15□□□□□ -0.78
CKAP2-202ENST00000378034 KPRPQ5T749 579 aaPredicted RBP10.15□□□□□ -0.78
CKAP2-202ENST00000378034 GPHB5Q86YW7 130 aa10.15□□□□□ -0.78
CKAP2-202ENST00000378034 OR4D5Q8NGN0 318 aa10.15□□□□□ -0.78
CKAP2-202ENST00000378034 PINX1Q96BK5 328 aaKnown RBP10.15□□□□□ -0.78
CKAP2-202ENST00000378034 ZMAT5Q9UDW3 170 aaKnown RBP10.15□□□□□ -0.78
CKAP2-202ENST00000378034 RPS10-NUDT3A0A1W2PQS6 291 aa10.14□□□□□ -0.79
CKAP2-202ENST00000378034 MPTX1A8MV57 137 aa10.14□□□□□ -0.79
CKAP2-202ENST00000378034 TGOLN2O43493 480 aa10.14□□□□□ -0.79
CKAP2-202ENST00000378034 IFNA10P01566 189 aa10.14□□□□□ -0.79
CKAP2-202ENST00000378034 GPR183P32249 361 aa10.14□□□□□ -0.79
CKAP2-202ENST00000378034 NKX2-1P43699 371 aaPredicted RBP10.14□□□□□ -0.79
CKAP2-202ENST00000378034 RPP30P78346 268 aaKnown RBP10.14□□□□□ -0.79
CKAP2-202ENST00000378034 ACSM6Q6P461 480 aa10.14□□□□□ -0.79
CKAP2-202ENST00000378034 ZBTB8BQ8NAP8 495 aaPredicted RBP10.14□□□□□ -0.79
CKAP2-202ENST00000378034 UXS1Q8NBZ7 420 aa10.14□□□□□ -0.79
CKAP2-202ENST00000378034 OR10C1Q96KK4 312 aa10.14□□□□□ -0.79
CKAP2-202ENST00000378034 NBEAL1Q6ZS30 2694 aa10.14□□□□□ -0.79
CKAP2-202ENST00000378034 FBN3Q75N90 2809 aa10.14□□□□□ -0.79
CKAP2-202ENST00000378034 IGHV3-21A0A0B4J1V1 117 aa10.14□□□□□ -0.79
CKAP2-202ENST00000378034 LGALS9O00182 355 aa10.14□□□□□ -0.79
CKAP2-202ENST00000378034 NPBWR1P48145 328 aa10.14□□□□□ -0.79
CKAP2-202ENST00000378034 SYNJ2BPP57105 145 aa10.14□□□□□ -0.79
CKAP2-202ENST00000378034 FAM106AQ4KMX7 169 aa10.14□□□□□ -0.79
CKAP2-202ENST00000378034 Q56UQ5 140 aa10.14□□□□□ -0.79
CKAP2-202ENST00000378034 ETFRF1Q6IPR1 90 aa10.14□□□□□ -0.79
CKAP2-202ENST00000378034 OR9G4Q8NGQ1 327 aa10.14□□□□□ -0.79
CKAP2-202ENST00000378034 PEMTQ9UBM1 199 aa10.14□□□□□ -0.79
CKAP2-202ENST00000378034 OR2T8A6NH00 312 aa10.13□□□□□ -0.79
CKAP2-202ENST00000378034 F8W735 103 aaPredicted RBP10.13□□□□□ -0.79
CKAP2-202ENST00000378034 OR2C1O95371 312 aa10.13□□□□□ -0.79
CKAP2-202ENST00000378034 OPRK1P41145 380 aa10.13□□□□□ -0.79
CKAP2-202ENST00000378034 BEAN1Q3B7T3 259 aa10.13□□□□□ -0.79
CKAP2-202ENST00000378034 REC114Q7Z4M0 266 aa10.13□□□□□ -0.79
CKAP2-202ENST00000378034 CMYA5Q8N3K9 4069 aa10.13□□□□□ -0.79
CKAP2-202ENST00000378034 WRBO00258 174 aa10.12□□□□□ -0.79
CKAP2-202ENST00000378034 SLC25A4P12235 298 aa10.12□□□□□ -0.79
CKAP2-202ENST00000378034 GSG1LQ6UXU4 331 aa10.12□□□□□ -0.79
CKAP2-202ENST00000378034 UBAC2Q8NBM4 344 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms