RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 Q6ZSR3 168 aa7.29□□□□□ -1.24
PCDH9-202ENST00000377865 SSC4DQ8WTU2 575 aa7.29□□□□□ -1.24
PCDH9-202ENST00000377865 C15orf62A8K5M9 175 aa7.29□□□□□ -1.24
PCDH9-202ENST00000377865 GPX1P07203 203 aa7.29□□□□□ -1.24
PCDH9-202ENST00000377865 YPEL3P61236 119 aaPredicted RBP7.29□□□□□ -1.24
PCDH9-202ENST00000377865 Q6ZRM9 215 aa7.29□□□□□ -1.24
PCDH9-202ENST00000377865 OR5A1Q8NGJ0 315 aa7.29□□□□□ -1.24
PCDH9-202ENST00000377865 PRELID3AQ96N28 172 aa7.29□□□□□ -1.24
PCDH9-202ENST00000377865 LINC00312Q9Y6C7 94 aa7.29□□□□□ -1.24
PCDH9-202ENST00000377865 MFAP4P55083 255 aa7.29□□□□□ -1.24
PCDH9-202ENST00000377865 FOXA3P55318 350 aaPredicted RBP7.29□□□□□ -1.24
PCDH9-202ENST00000377865 GFRA1P56159 465 aa7.29□□□□□ -1.24
PCDH9-202ENST00000377865 ZNF585BQ52M93 769 aa7.29□□□□□ -1.24
PCDH9-202ENST00000377865 CIARTQ8N365 385 aaPredicted RBP7.29□□□□□ -1.24
PCDH9-202ENST00000377865 ZNRF1Q8ND25 227 aa7.29□□□□□ -1.24
PCDH9-202ENST00000377865 LOXL4Q96JB6 756 aa7.29□□□□□ -1.24
PCDH9-202ENST00000377865 Q9H3A6 140 aa7.29□□□□□ -1.24
PCDH9-202ENST00000377865 IGKV1-6A0A0C4DH72 117 aa7.28□□□□□ -1.24
PCDH9-202ENST00000377865 COLCA1Q6ZS62 124 aa7.28□□□□□ -1.24
PCDH9-202ENST00000377865 IGHV1-69-2A0A0G2JMI3 117 aa7.28□□□□□ -1.24
PCDH9-202ENST00000377865 MOSP00540 346 aa7.28□□□□□ -1.24
PCDH9-202ENST00000377865 CELA3BP08861 270 aa7.28□□□□□ -1.24
PCDH9-202ENST00000377865 RAB9AP51151 201 aa7.28□□□□□ -1.24
PCDH9-202ENST00000377865 SRSF9Q13242 221 aaKnown RBP eCLIP7.28□□□□□ -1.24
PCDH9-202ENST00000377865 UBE2V1Q13404 147 aa7.28□□□□□ -1.24
PCDH9-202ENST00000377865 ZNF883P0CG24 379 aa7.28□□□□□ -1.24
PCDH9-202ENST00000377865 SAA1P0DJI8 122 aaPredicted RBP7.28□□□□□ -1.24
PCDH9-202ENST00000377865 LTBRP36941 435 aa7.28□□□□□ -1.24
PCDH9-202ENST00000377865 COA6Q5JTJ3 125 aaKnown RBP7.28□□□□□ -1.24
PCDH9-202ENST00000377865 TIMM23BQ5SRD1 257 aa7.28□□□□□ -1.24
PCDH9-202ENST00000377865 RAB37Q96AX2 223 aa7.28□□□□□ -1.24
PCDH9-202ENST00000377865 JKAMPQ9P055 326 aa7.28□□□□□ -1.24
PCDH9-202ENST00000377865 C19orf67A6NJJ6 358 aa7.28□□□□□ -1.24
PCDH9-202ENST00000377865 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.28□□□□□ -1.24
PCDH9-202ENST00000377865 WNT2P09544 360 aa7.28□□□□□ -1.24
PCDH9-202ENST00000377865 RPL7P18124 248 aaKnown RBP7.28□□□□□ -1.24
PCDH9-202ENST00000377865 TFPI2P48307 235 aa7.28□□□□□ -1.24
PCDH9-202ENST00000377865 MBNL2Q5VZF2 373 aaKnown RBP7.28□□□□□ -1.24
PCDH9-202ENST00000377865 TEX45Q8NA69 505 aa7.28□□□□□ -1.24
PCDH9-202ENST00000377865 ST6GALNAC6Q969X2 333 aa7.28□□□□□ -1.24
PCDH9-202ENST00000377865 LILRA1O75019 489 aa7.28□□□□□ -1.24
PCDH9-202ENST00000377865 TMEM50AO95807 157 aa7.28□□□□□ -1.24
PCDH9-202ENST00000377865 ANOS1P23352 680 aa7.28□□□□□ -1.24
PCDH9-202ENST00000377865 ZFP36L1Q07352 338 aaKnown RBP7.28□□□□□ -1.24
PCDH9-202ENST00000377865 SPANXN1Q5VSR9 72 aa7.28□□□□□ -1.24
PCDH9-202ENST00000377865 C5orf30Q96GV9 206 aa7.28□□□□□ -1.24
PCDH9-202ENST00000377865 DCTN5Q9BTE1 182 aa7.28□□□□□ -1.24
PCDH9-202ENST00000377865 MBNL3Q9NUK0 354 aaKnown RBP7.28□□□□□ -1.24
PCDH9-202ENST00000377865 FANCMQ8IYD8 2048 aa7.27□□□□□ -1.24
PCDH9-202ENST00000377865 C3orf79P0CE67 100 aa7.27□□□□□ -1.25
PCDH9-202ENST00000377865 APELAP0DMC3 54 aa7.27□□□□□ -1.25
PCDH9-202ENST00000377865 RABAC1Q9UI14 185 aa7.27□□□□□ -1.25
PCDH9-202ENST00000377865 DENND4AQ7Z401 1863 aa7.27□□□□□ -1.25
PCDH9-202ENST00000377865 PINLYPA6NC86 204 aa7.27□□□□□ -1.25
PCDH9-202ENST00000377865 PSMB2P49721 201 aa7.27□□□□□ -1.25
PCDH9-202ENST00000377865 SPATA31B1PQ5VZV4 182 aa7.27□□□□□ -1.25
PCDH9-202ENST00000377865 NUDT10Q8NFP7 164 aa7.27□□□□□ -1.25
PCDH9-202ENST00000377865 NUDT11Q96G61 164 aa7.27□□□□□ -1.25
PCDH9-202ENST00000377865 HIST1H4GQ99525 98 aa7.27□□□□□ -1.25
PCDH9-202ENST00000377865 CCL8P80075 99 aa7.27□□□□□ -1.25
PCDH9-202ENST00000377865 FOXF2Q12947 444 aa7.27□□□□□ -1.25
PCDH9-202ENST00000377865 TMEM249Q2WGJ8 235 aa7.27□□□□□ -1.25
PCDH9-202ENST00000377865 NEUROG1Q92886 237 aa7.27□□□□□ -1.25
PCDH9-202ENST00000377865 MRPL20Q9BYC9 149 aaKnown RBP7.27□□□□□ -1.25
PCDH9-202ENST00000377865 PLA2G2EQ9NZK7 142 aa7.27□□□□□ -1.25
PCDH9-202ENST00000377865 NTN3O00634 580 aaPredicted RBP7.27□□□□□ -1.25
PCDH9-202ENST00000377865 WISP1O95388 367 aa7.27□□□□□ -1.25
PCDH9-202ENST00000377865 REG1AP05451 166 aa7.27□□□□□ -1.25
PCDH9-202ENST00000377865 FCGR2BP31994 310 aaPredicted RBP7.27□□□□□ -1.25
PCDH9-202ENST00000377865 PDLIM4P50479 330 aa7.27□□□□□ -1.25
PCDH9-202ENST00000377865 TMEM78Q5T7P6 136 aa7.27□□□□□ -1.25
PCDH9-202ENST00000377865 C20orf204Q6ZNR8 217 aa7.27□□□□□ -1.25
PCDH9-202ENST00000377865 TICRRQ7Z2Z1 1910 aa7.26□□□□□ -1.25
PCDH9-202ENST00000377865 A0A1B0GV72 72 aa7.26□□□□□ -1.25
PCDH9-202ENST00000377865 TSPOP30536 169 aa7.26□□□□□ -1.25
PCDH9-202ENST00000377865 ZNF788Q6ZQV5 615 aa7.26□□□□□ -1.25
PCDH9-202ENST00000377865 OR5AN1Q8NGI8 311 aa7.26□□□□□ -1.25
PCDH9-202ENST00000377865 LINC01559Q495D7 138 aa7.26□□□□□ -1.25
PCDH9-202ENST00000377865 CENPVQ7Z7K6 275 aaPredicted RBP7.26□□□□□ -1.25
PCDH9-202ENST00000377865 ORMDL3Q8N138 153 aa7.26□□□□□ -1.25
PCDH9-202ENST00000377865 PYGO2Q9BRQ0 406 aa7.26□□□□□ -1.25
PCDH9-202ENST00000377865 SPCS1Q9Y6A9 102 aa7.26□□□□□ -1.25
PCDH9-202ENST00000377865 LRRK1Q38SD2 2015 aa7.26□□□□□ -1.25
PCDH9-202ENST00000377865 MLNRO43193 412 aa7.26□□□□□ -1.25
PCDH9-202ENST00000377865 ATP5LO75964 103 aa7.26□□□□□ -1.25
PCDH9-202ENST00000377865 TEX43Q6ZNM6 134 aa7.26□□□□□ -1.25
PCDH9-202ENST00000377865 SSBP4Q9BWG4 385 aaPredicted RBP7.26□□□□□ -1.25
PCDH9-202ENST00000377865 FOXH1O75593 365 aa7.26□□□□□ -1.25
PCDH9-202ENST00000377865 GATA2P23769 480 aaPredicted RBP7.26□□□□□ -1.25
PCDH9-202ENST00000377865 NTF4P34130 210 aa7.26□□□□□ -1.25
PCDH9-202ENST00000377865 RELQ04864 619 aaPredicted RBP7.26□□□□□ -1.25
PCDH9-202ENST00000377865 HSD52Q0P140 79 aa7.26□□□□□ -1.25
PCDH9-202ENST00000377865 SGK494Q96LW2 274 aa7.26□□□□□ -1.25
PCDH9-202ENST00000377865 CLEC7AQ9BXN2 247 aa7.26□□□□□ -1.25
PCDH9-202ENST00000377865 SEPSECSQ9HD40 501 aaKnown RBP7.26□□□□□ -1.25
PCDH9-202ENST00000377865 F11RQ9Y624 299 aaKnown RBP7.26□□□□□ -1.25
PCDH9-202ENST00000377865 ITGB1BP1O14713 200 aa7.26□□□□□ -1.25
PCDH9-202ENST00000377865 GFRA3O60609 400 aa7.26□□□□□ -1.25
PCDH9-202ENST00000377865 Q8NFD4 153 aa7.26□□□□□ -1.25
PCDH9-202ENST00000377865 F5P12259 2224 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms