RNA–Protein interactions for RNA: ENST00000377625.6

TBC1D4-201, Transcript of TBC1 domain family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TBC1D4, Length 6,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4-201ENST00000377625 CARHSP1Q9Y2V2 147 aaKnown RBP15.87■□□□□ 0.13
TBC1D4-201ENST00000377625 SCN4AP35499 1836 aa15.87■□□□□ 0.13
TBC1D4-201ENST00000377625 C15orf61A6NNL5 157 aa15.87■□□□□ 0.13
TBC1D4-201ENST00000377625 HIGD1CA8MV81 97 aa15.87■□□□□ 0.13
TBC1D4-201ENST00000377625 GNG5P63218 68 aa15.87■□□□□ 0.13
TBC1D4-201ENST00000377625 LYNX1G3V0Z9 82 aa15.87■□□□□ 0.13
TBC1D4-201ENST00000377625 TFF1P04155 84 aa15.87■□□□□ 0.13
TBC1D4-201ENST00000377625 LYNX1P0DP58 116 aa15.87■□□□□ 0.13
TBC1D4-201ENST00000377625 PIKFYVEQ9Y2I7 2098 aa15.87■□□□□ 0.13
TBC1D4-201ENST00000377625 IGKV1D-13A0A0B4J2D9 117 aa15.87■□□□□ 0.13
TBC1D4-201ENST00000377625 FABP5P3A8MUU1 101 aa15.87■□□□□ 0.13
TBC1D4-201ENST00000377625 IGKV1-13P0DP09 117 aa15.87■□□□□ 0.13
TBC1D4-201ENST00000377625 PVRIGQ6DKI7 326 aa15.87■□□□□ 0.13
TBC1D4-201ENST00000377625 SLC50A1Q9BRV3 221 aa15.87■□□□□ 0.13
TBC1D4-201ENST00000377625 DEPPQ9NTK1 212 aa15.87■□□□□ 0.13
TBC1D4-201ENST00000377625 CACNA1IQ9P0X4 2223 aa15.87■□□□□ 0.13
TBC1D4-201ENST00000377625 SCN2AQ99250 2005 aa15.86■□□□□ 0.13
TBC1D4-201ENST00000377625 TRBV7-9A0A0J9YWB2 115 aa15.86■□□□□ 0.13
TBC1D4-201ENST00000377625 LINC00518Q8N0U6 118 aa15.86■□□□□ 0.13
TBC1D4-201ENST00000377625 ST6GALNAC6Q969X2 333 aa15.86■□□□□ 0.13
TBC1D4-201ENST00000377625 C18orf12Q96KH6 178 aa15.86■□□□□ 0.13
TBC1D4-201ENST00000377625 LEPP41159 167 aa15.86■□□□□ 0.13
TBC1D4-201ENST00000377625 ZNF497Q6ZNH5 498 aa15.86■□□□□ 0.13
TBC1D4-201ENST00000377625 RNF125Q96EQ8 232 aa15.86■□□□□ 0.13
TBC1D4-201ENST00000377625 CSRP1P21291 193 aaKnown RBP15.86■□□□□ 0.13
TBC1D4-201ENST00000377625 ASCL2Q99929 193 aa15.86■□□□□ 0.13
TBC1D4-201ENST00000377625 LINC00271P0C7V0 271 aa15.86■□□□□ 0.13
TBC1D4-201ENST00000377625 RHOGP84095 191 aa15.86■□□□□ 0.13
TBC1D4-201ENST00000377625 ST6GALNAC3Q8NDV1 305 aa15.86■□□□□ 0.13
TBC1D4-201ENST00000377625 LYZL4Q96KX0 146 aa15.86■□□□□ 0.13
TBC1D4-201ENST00000377625 RNF222A6NCQ9 220 aa15.85■□□□□ 0.13
TBC1D4-201ENST00000377625 FAM19A2Q8N3H0 131 aa15.85■□□□□ 0.13
TBC1D4-201ENST00000377625 TRAV14DV4A0A0A6YYC5 116 aa15.85■□□□□ 0.13
TBC1D4-201ENST00000377625 JMJD8Q96S16 334 aa15.85■□□□□ 0.13
TBC1D4-201ENST00000377625 MALP21145 153 aa15.85■□□□□ 0.13
TBC1D4-201ENST00000377625 TRAV9-1A0A075B6T8 112 aa15.85■□□□□ 0.13
TBC1D4-201ENST00000377625 C10orf126Q8N4M7 172 aa15.85■□□□□ 0.13
TBC1D4-201ENST00000377625 IGHV1-18A0A0C4DH31 117 aa15.84■□□□□ 0.13
TBC1D4-201ENST00000377625 RAMP3O60896 148 aa15.84■□□□□ 0.13
TBC1D4-201ENST00000377625 APOMO95445 188 aa15.84■□□□□ 0.13
TBC1D4-201ENST00000377625 RNASE7Q9H1E1 156 aaKnown RBP15.84■□□□□ 0.13
TBC1D4-201ENST00000377625 SPRR3Q9UBC9 169 aa15.84■□□□□ 0.13
TBC1D4-201ENST00000377625 IGKV3D-20A0A0C4DH25 116 aa15.84■□□□□ 0.13
TBC1D4-201ENST00000377625 RBMY1BA6NDE4 496 aaKnown RBP15.84■□□□□ 0.13
TBC1D4-201ENST00000377625 RBMY1EA6NEQ0 496 aaKnown RBP15.84■□□□□ 0.13
TBC1D4-201ENST00000377625 RBMY1DP0C7P1 496 aaKnown RBP15.84■□□□□ 0.13
TBC1D4-201ENST00000377625 RBMY1A1P0DJD3 496 aaKnown RBP15.84■□□□□ 0.13
TBC1D4-201ENST00000377625 RBMY1CP0DJD4 496 aa15.84■□□□□ 0.13
TBC1D4-201ENST00000377625 PGPEP1Q9NXJ5 209 aa15.84■□□□□ 0.13
TBC1D4-201ENST00000377625 OR5AN1Q8NGI8 311 aa15.84■□□□□ 0.13
TBC1D4-201ENST00000377625 ST20Q9HBF5 79 aa15.84■□□□□ 0.13
TBC1D4-201ENST00000377625 TMEM42Q69YG0 159 aa15.83■□□□□ 0.13
TBC1D4-201ENST00000377625 ZNF600Q6ZNG1 722 aa15.83■□□□□ 0.13
TBC1D4-201ENST00000377625 LINC00469Q8N7U9 141 aa15.83■□□□□ 0.12
TBC1D4-201ENST00000377625 IGKV1-9A0A0C4DH69 117 aa15.83■□□□□ 0.12
TBC1D4-201ENST00000377625 DUSP14O95147 198 aaKnown RBP15.83■□□□□ 0.12
TBC1D4-201ENST00000377625 TBX6O95947 436 aaPredicted RBP15.82■□□□□ 0.12
TBC1D4-201ENST00000377625 LY6DQ14210 128 aa15.82■□□□□ 0.12
TBC1D4-201ENST00000377625 FBLN7Q53RD9 439 aa15.82■□□□□ 0.12
TBC1D4-201ENST00000377625 METRNQ9UJH8 293 aa15.82■□□□□ 0.12
TBC1D4-201ENST00000377625 E9PLN8 166 aa15.82■□□□□ 0.12
TBC1D4-201ENST00000377625 VKORC1Q9BQB6 163 aa15.82■□□□□ 0.12
TBC1D4-201ENST00000377625 VCX2Q9H322 139 aa15.82■□□□□ 0.12
TBC1D4-201ENST00000377625 A0A087WWC5 75 aa15.82■□□□□ 0.12
TBC1D4-201ENST00000377625 IGLV3-32A0A0A0MS00 114 aa15.82■□□□□ 0.12
TBC1D4-201ENST00000377625 A0A1B0GWB2 263 aa15.82■□□□□ 0.12
TBC1D4-201ENST00000377625 TCRBV4S1A1TA0A5B7 111 aa15.82■□□□□ 0.12
TBC1D4-201ENST00000377625 PINLYPA6NC86 204 aa15.82■□□□□ 0.12
TBC1D4-201ENST00000377625 RPL23P62829 140 aaKnown RBP15.82■□□□□ 0.12
TBC1D4-201ENST00000377625 MYOFQ9NZM1 2061 aa15.82■□□□□ 0.12
TBC1D4-201ENST00000377625 TIMM23O14925 209 aa15.82■□□□□ 0.12
TBC1D4-201ENST00000377625 PTPRFP10586 1907 aa15.82■□□□□ 0.12
TBC1D4-201ENST00000377625 IFI27P40305 119 aaPredicted RBP15.82■□□□□ 0.12
TBC1D4-201ENST00000377625 CCL20P78556 96 aa15.82■□□□□ 0.12
TBC1D4-201ENST00000377625 CD55P08174 381 aa15.81■□□□□ 0.12
TBC1D4-201ENST00000377625 ZFP36L1Q07352 338 aaKnown RBP15.81■□□□□ 0.12
TBC1D4-201ENST00000377625 EPDR1Q9UM22 224 aa15.81■□□□□ 0.12
TBC1D4-201ENST00000377625 SPACA3Q8IXA5 215 aa15.81■□□□□ 0.12
TBC1D4-201ENST00000377625 TUBGCP6Q96RT7 1819 aa15.81■□□□□ 0.12
TBC1D4-201ENST00000377625 PYYP10082 97 aa15.81■□□□□ 0.12
TBC1D4-201ENST00000377625 CCL1P22362 96 aa15.81■□□□□ 0.12
TBC1D4-201ENST00000377625 ZNF324BQ6AW86 544 aaPredicted RBP15.81■□□□□ 0.12
TBC1D4-201ENST00000377625 TRAV21A0A0B4J279 112 aa15.81■□□□□ 0.12
TBC1D4-201ENST00000377625 C8orf46Q8TAG6 207 aa15.81■□□□□ 0.12
TBC1D4-201ENST00000377625 BEND2Q8NDZ0 799 aa15.81■□□□□ 0.12
TBC1D4-201ENST00000377625 A0A1B0GV90 55 aa15.8■□□□□ 0.12
TBC1D4-201ENST00000377625 OR9G9P0C7N8 305 aa15.8■□□□□ 0.12
TBC1D4-201ENST00000377625 SSBP4Q9BWG4 385 aaPredicted RBP15.8■□□□□ 0.12
TBC1D4-201ENST00000377625 OTOFQ9HC10 1997 aa15.8■□□□□ 0.12
TBC1D4-201ENST00000377625 TRAV40A0A0B4J280 105 aa15.8■□□□□ 0.12
TBC1D4-201ENST00000377625 PSMG4Q5JS54 123 aa15.8■□□□□ 0.12
TBC1D4-201ENST00000377625 C11orf44Q8N8P7 122 aa15.8■□□□□ 0.12
TBC1D4-201ENST00000377625 PARP14Q460N5 1801 aa15.8■□□□□ 0.12
TBC1D4-201ENST00000377625 IGHV1-46P01743 117 aa15.8■□□□□ 0.12
TBC1D4-201ENST00000377625 PRCDQ00LT1 54 aa15.8■□□□□ 0.12
TBC1D4-201ENST00000377625 FLVCR1-AS1Q8TAF5 88 aa15.8■□□□□ 0.12
TBC1D4-201ENST00000377625 GFI1BQ5VTD9 330 aa15.79■□□□□ 0.12
TBC1D4-201ENST00000377625 HEATR5BQ9P2D3 2071 aa15.79■□□□□ 0.12
TBC1D4-201ENST00000377625 TRIOBPQ9H2D6 2365 aa15.79■□□□□ 0.12
TBC1D4-201ENST00000377625 WNT2P09544 360 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms