RNA–Protein interactions for RNA: ENST00000377294.2

ZKSCAN4-201, Transcript of zinc finger with KRAB and SCAN domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZKSCAN4, Length 2,375 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN4-201ENST00000377294 RAB31Q13636 194 aa11.75□□□□□ -0.53
ZKSCAN4-201ENST00000377294 TMEM256Q8N2U0 113 aa11.75□□□□□ -0.53
ZKSCAN4-201ENST00000377294 TRAPPC1Q9Y5R8 145 aa11.75□□□□□ -0.53
ZKSCAN4-201ENST00000377294 TPRP12270 2363 aaKnown RBP11.75□□□□□ -0.53
ZKSCAN4-201ENST00000377294 SPINK4O60575 86 aa11.75□□□□□ -0.53
ZKSCAN4-201ENST00000377294 DMRTC2Q8IXT2 367 aaPredicted RBP11.75□□□□□ -0.53
ZKSCAN4-201ENST00000377294 IGFBPL1Q8WX77 278 aa11.75□□□□□ -0.53
ZKSCAN4-201ENST00000377294 UHRF2Q96PU4 802 aa11.75□□□□□ -0.53
ZKSCAN4-201ENST00000377294 COMMD5Q9GZQ3 224 aa11.75□□□□□ -0.53
ZKSCAN4-201ENST00000377294 BET1LQ9NYM9 111 aa11.75□□□□□ -0.53
ZKSCAN4-201ENST00000377294 ZNF257Q9Y2Q1 563 aa11.75□□□□□ -0.53
ZKSCAN4-201ENST00000377294 NBASA2RRP1 2371 aa11.74□□□□□ -0.53
ZKSCAN4-201ENST00000377294 SHISA9B4DS77 424 aa11.74□□□□□ -0.53
ZKSCAN4-201ENST00000377294 GGTLC3B5MD39 225 aa11.74□□□□□ -0.53
ZKSCAN4-201ENST00000377294 APOA2P02652 100 aa11.74□□□□□ -0.53
ZKSCAN4-201ENST00000377294 FAM87AP0C7U9 286 aa11.74□□□□□ -0.53
ZKSCAN4-201ENST00000377294 CBLN1P23435 193 aa11.74□□□□□ -0.53
ZKSCAN4-201ENST00000377294 LOXP28300 417 aaPredicted RBP11.74□□□□□ -0.53
ZKSCAN4-201ENST00000377294 RPL8P62917 257 aaKnown RBP11.74□□□□□ -0.53
ZKSCAN4-201ENST00000377294 NHLRC2Q8NBF2 726 aa11.74□□□□□ -0.53
ZKSCAN4-201ENST00000377294 FNDC4Q9H6D8 234 aaPredicted RBP11.74□□□□□ -0.53
ZKSCAN4-201ENST00000377294 NDUFA4L2Q9NRX3 87 aa11.74□□□□□ -0.53
ZKSCAN4-201ENST00000377294 IGHV3-21A0A0B4J1V1 117 aa11.74□□□□□ -0.53
ZKSCAN4-201ENST00000377294 SLC25A17O43808 307 aa11.74□□□□□ -0.53
ZKSCAN4-201ENST00000377294 TYMSP04818 313 aa11.74□□□□□ -0.53
ZKSCAN4-201ENST00000377294 GZMBP10144 247 aa11.74□□□□□ -0.53
ZKSCAN4-201ENST00000377294 CNTFRP26992 372 aa11.74□□□□□ -0.53
ZKSCAN4-201ENST00000377294 GRNP28799 593 aaKnown RBP11.74□□□□□ -0.53
ZKSCAN4-201ENST00000377294 ADMP35318 185 aa11.74□□□□□ -0.53
ZKSCAN4-201ENST00000377294 SSTP61278 116 aa11.74□□□□□ -0.53
ZKSCAN4-201ENST00000377294 ZNF90Q03938 601 aa11.74□□□□□ -0.53
ZKSCAN4-201ENST00000377294 FXYD3Q14802 87 aa11.74□□□□□ -0.53
ZKSCAN4-201ENST00000377294 SPACA3Q8IXA5 215 aa11.74□□□□□ -0.53
ZKSCAN4-201ENST00000377294 OR10G8Q8NGN5 311 aa11.74□□□□□ -0.53
ZKSCAN4-201ENST00000377294 RNASE6Q93091 150 aaKnown RBP11.74□□□□□ -0.53
ZKSCAN4-201ENST00000377294 FLYWCH2Q96CP2 140 aaKnown RBP11.74□□□□□ -0.53
ZKSCAN4-201ENST00000377294 DYNLRB1Q9NP97 96 aa11.74□□□□□ -0.53
ZKSCAN4-201ENST00000377294 NDUFB3O43676 98 aa11.73□□□□□ -0.53
ZKSCAN4-201ENST00000377294 SLC35B1P78383 322 aa11.73□□□□□ -0.53
ZKSCAN4-201ENST00000377294 C2orf83Q53S99 150 aa11.73□□□□□ -0.53
ZKSCAN4-201ENST00000377294 CENPWQ5EE01 88 aa11.73□□□□□ -0.53
ZKSCAN4-201ENST00000377294 ASCL5Q7RTU5 278 aa11.73□□□□□ -0.53
ZKSCAN4-201ENST00000377294 OR5AN1Q8NGI8 311 aa11.73□□□□□ -0.53
ZKSCAN4-201ENST00000377294 EAF1Q96JC9 268 aaPredicted RBP11.73□□□□□ -0.53
ZKSCAN4-201ENST00000377294 LINC00479Q96M42 142 aa11.73□□□□□ -0.53
ZKSCAN4-201ENST00000377294 RNASE7Q9H1E1 156 aaKnown RBP11.73□□□□□ -0.53
ZKSCAN4-201ENST00000377294 ZNF430Q9H8G1 570 aaPredicted RBP11.73□□□□□ -0.53
ZKSCAN4-201ENST00000377294 IGF2RP11717 2491 aa11.73□□□□□ -0.53
ZKSCAN4-201ENST00000377294 PTPRQQ9UMZ3 2332 aa11.73□□□□□ -0.53
ZKSCAN4-201ENST00000377294 ENSAO43768 121 aaKnown RBP11.72□□□□□ -0.53
ZKSCAN4-201ENST00000377294 PYYP10082 97 aa11.72□□□□□ -0.53
ZKSCAN4-201ENST00000377294 CNN1P51911 297 aaKnown RBP11.72□□□□□ -0.53
ZKSCAN4-201ENST00000377294 CD69Q07108 199 aa11.72□□□□□ -0.53
ZKSCAN4-201ENST00000377294 PQLC2Q6ZP29 291 aa11.72□□□□□ -0.53
ZKSCAN4-201ENST00000377294 JKAMPQ9P055 326 aa11.72□□□□□ -0.53
ZKSCAN4-201ENST00000377294 ZNF705GA8MUZ8 300 aaPredicted RBP11.72□□□□□ -0.53
ZKSCAN4-201ENST00000377294 IGLV2-23P01705 113 aa11.72□□□□□ -0.53
ZKSCAN4-201ENST00000377294 CD33P20138 364 aa11.72□□□□□ -0.53
ZKSCAN4-201ENST00000377294 TBR1Q16650 682 aa11.72□□□□□ -0.53
ZKSCAN4-201ENST00000377294 LINC01560Q8TB33 94 aa11.72□□□□□ -0.53
ZKSCAN4-201ENST00000377294 TNFRSF13BO14836 293 aaPredicted RBP11.71□□□□□ -0.53
ZKSCAN4-201ENST00000377294 CD99P14209 185 aa11.71□□□□□ -0.53
ZKSCAN4-201ENST00000377294 SUMO1P63165 101 aaKnown RBP11.71□□□□□ -0.53
ZKSCAN4-201ENST00000377294 MEF2CQ06413 473 aaPredicted RBP11.71□□□□□ -0.53
ZKSCAN4-201ENST00000377294 LRRC10Q5BKY1 277 aa11.71□□□□□ -0.53
ZKSCAN4-201ENST00000377294 HCP5Q6MZN7 132 aa11.71□□□□□ -0.53
ZKSCAN4-201ENST00000377294 OR5B3Q8NH48 314 aa11.71□□□□□ -0.53
ZKSCAN4-201ENST00000377294 OSR1Q8TAX0 266 aaPredicted RBP11.71□□□□□ -0.53
ZKSCAN4-201ENST00000377294 ATRXP46100 2492 aa11.71□□□□□ -0.53
ZKSCAN4-201ENST00000377294 F2Z2F3 143 aa11.71□□□□□ -0.54
ZKSCAN4-201ENST00000377294 TCL1AP56279 114 aa11.71□□□□□ -0.54
ZKSCAN4-201ENST00000377294 ERVFC1-1P60608 527 aa11.71□□□□□ -0.54
ZKSCAN4-201ENST00000377294 TMEM177Q53S58 311 aa11.71□□□□□ -0.54
ZKSCAN4-201ENST00000377294 OR1L8Q8NGR8 309 aa11.71□□□□□ -0.54
ZKSCAN4-201ENST00000377294 NPIPB3Q92617 1050 aa11.71□□□□□ -0.54
ZKSCAN4-201ENST00000377294 SLC25A2Q9BXI2 301 aa11.71□□□□□ -0.54
ZKSCAN4-201ENST00000377294 SPTA1P02549 2419 aa11.71□□□□□ -0.54
ZKSCAN4-201ENST00000377294 MOSP00540 346 aa11.7□□□□□ -0.54
ZKSCAN4-201ENST00000377294 PDLIM4P50479 330 aa11.7□□□□□ -0.54
ZKSCAN4-201ENST00000377294 DLX6P56179 175 aa11.7□□□□□ -0.54
ZKSCAN4-201ENST00000377294 LCN2P80188 198 aa11.7□□□□□ -0.54
ZKSCAN4-201ENST00000377294 FOXL1Q12952 345 aa11.7□□□□□ -0.54
ZKSCAN4-201ENST00000377294 MRGPRG-AS1Q2M3A8 158 aa11.7□□□□□ -0.54
ZKSCAN4-201ENST00000377294 COA6Q5JTJ3 125 aaKnown RBP11.7□□□□□ -0.54
ZKSCAN4-201ENST00000377294 C11orf52Q96A22 123 aa11.7□□□□□ -0.54
ZKSCAN4-201ENST00000377294 VPS13CQ709C8 3753 aa11.7□□□□□ -0.54
ZKSCAN4-201ENST00000377294 ARHGAP32A7KAX9 2087 aa11.7□□□□□ -0.54
ZKSCAN4-201ENST00000377294 DLL1O00548 723 aa11.7□□□□□ -0.54
ZKSCAN4-201ENST00000377294 LY6HO94772 140 aa11.7□□□□□ -0.54
ZKSCAN4-201ENST00000377294 OR5G3P0C626 314 aa11.7□□□□□ -0.54
ZKSCAN4-201ENST00000377294 JOSD1Q15040 202 aaPredicted RBP11.7□□□□□ -0.54
ZKSCAN4-201ENST00000377294 OR8I2Q8N0Y5 310 aa11.7□□□□□ -0.54
ZKSCAN4-201ENST00000377294 C11orf42Q8N5U0 333 aa11.7□□□□□ -0.54
ZKSCAN4-201ENST00000377294 ST6GALNAC6Q969X2 333 aa11.7□□□□□ -0.54
ZKSCAN4-201ENST00000377294 SLC35E1Q96K37 410 aa11.7□□□□□ -0.54
ZKSCAN4-201ENST00000377294 SCNM1Q9BWG6 230 aa11.7□□□□□ -0.54
ZKSCAN4-201ENST00000377294 TECRQ9NZ01 308 aaKnown RBP11.7□□□□□ -0.54
ZKSCAN4-201ENST00000377294 ABCA4P78363 2273 aa11.7□□□□□ -0.54
ZKSCAN4-201ENST00000377294 MALRD1Q5VYJ5 2156 aa11.7□□□□□ -0.54
ZKSCAN4-201ENST00000377294 A0A1W2PPI3 338 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms