RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 SCN8AQ9UQD0 1980 aa11.34□□□□□ -0.59
GPC6-201ENST00000377047 A0A087WV48 116 aa11.34□□□□□ -0.59
GPC6-201ENST00000377047 LEPP41159 167 aa11.34□□□□□ -0.59
GPC6-201ENST00000377047 ZNF585BQ52M93 769 aa11.34□□□□□ -0.59
GPC6-201ENST00000377047 LEMD1Q68G75 181 aa11.34□□□□□ -0.59
GPC6-201ENST00000377047 RPLP1P05386 114 aaKnown RBP11.33□□□□□ -0.6
GPC6-201ENST00000377047 CCL1P22362 96 aa11.33□□□□□ -0.6
GPC6-201ENST00000377047 PKIAP61925 76 aa11.33□□□□□ -0.6
GPC6-201ENST00000377047 MDS2Q8NDY4 140 aa11.33□□□□□ -0.6
GPC6-201ENST00000377047 GTF3AQ92664 365 aaKnown RBP11.33□□□□□ -0.6
GPC6-201ENST00000377047 ZNF256Q9Y2P7 627 aaPredicted RBP11.33□□□□□ -0.6
GPC6-201ENST00000377047 SELENOKQ9Y6D0 94 aa11.33□□□□□ -0.6
GPC6-201ENST00000377047 FBLL1A6NHQ2 334 aaKnown RBP11.33□□□□□ -0.6
GPC6-201ENST00000377047 MPTX1A8MV57 137 aa11.33□□□□□ -0.6
GPC6-201ENST00000377047 SMIM6P0DI80 62 aa11.33□□□□□ -0.6
GPC6-201ENST00000377047 BIVMQ86UB2 503 aa11.33□□□□□ -0.6
GPC6-201ENST00000377047 GPR61Q9BZJ8 451 aa11.33□□□□□ -0.6
GPC6-201ENST00000377047 CD7P09564 240 aa11.33□□□□□ -0.6
GPC6-201ENST00000377047 OR9G9P0C7N8 305 aa11.33□□□□□ -0.6
GPC6-201ENST00000377047 TMEM170BQ5T4T1 132 aa11.33□□□□□ -0.6
GPC6-201ENST00000377047 C2orf88Q9BSF0 95 aa11.33□□□□□ -0.6
GPC6-201ENST00000377047 TMEM70Q9BUB7 260 aa11.33□□□□□ -0.6
GPC6-201ENST00000377047 IGHV2-26A0A0B4J1V2 119 aa11.33□□□□□ -0.6
GPC6-201ENST00000377047 CD8AP01732 235 aa11.33□□□□□ -0.6
GPC6-201ENST00000377047 FOLR2P14207 255 aa11.33□□□□□ -0.6
GPC6-201ENST00000377047 SLC25A15Q9Y619 301 aa11.33□□□□□ -0.6
GPC6-201ENST00000377047 NEUROG3Q9Y4Z2 214 aa11.33□□□□□ -0.6
GPC6-201ENST00000377047 B4DSR2 109 aa11.32□□□□□ -0.6
GPC6-201ENST00000377047 OR10S1Q8NGN2 331 aa11.32□□□□□ -0.6
GPC6-201ENST00000377047 TRAV41A0A0B4J266 112 aa11.32□□□□□ -0.6
GPC6-201ENST00000377047 SAP30O75446 220 aa11.32□□□□□ -0.6
GPC6-201ENST00000377047 RNF125Q96EQ8 232 aa11.32□□□□□ -0.6
GPC6-201ENST00000377047 PRELID3AQ96N28 172 aa11.32□□□□□ -0.6
GPC6-201ENST00000377047 C18orf15Q96N68 181 aa11.32□□□□□ -0.6
GPC6-201ENST00000377047 TMEM160Q9NX00 188 aa11.32□□□□□ -0.6
GPC6-201ENST00000377047 FAM186AA6NE01 2351 aa11.32□□□□□ -0.6
GPC6-201ENST00000377047 TRBV9A0A0B4J1U6 114 aa11.32□□□□□ -0.6
GPC6-201ENST00000377047 PVRIGQ6DKI7 326 aa11.32□□□□□ -0.6
GPC6-201ENST00000377047 BRD3OSQ6XYD6 125 aa11.32□□□□□ -0.6
GPC6-201ENST00000377047 SELLP14151 372 aa11.32□□□□□ -0.6
GPC6-201ENST00000377047 FOXA3P55318 350 aaPredicted RBP11.32□□□□□ -0.6
GPC6-201ENST00000377047 TMEM200BQ69YZ2 307 aa11.32□□□□□ -0.6
GPC6-201ENST00000377047 DICER1Q9UPY3 1922 aaKnown RBP11.32□□□□□ -0.6
GPC6-201ENST00000377047 TMEM178BH3BS89 294 aa11.32□□□□□ -0.6
GPC6-201ENST00000377047 CRYGSP22914 178 aa11.32□□□□□ -0.6
GPC6-201ENST00000377047 ATP5G3P48201 142 aa11.32□□□□□ -0.6
GPC6-201ENST00000377047 PMCHL1Q16048 86 aa11.32□□□□□ -0.6
GPC6-201ENST00000377047 WFDC12Q8WWY7 111 aa11.32□□□□□ -0.6
GPC6-201ENST00000377047 MRPS16Q9Y3D3 137 aaKnown RBP11.32□□□□□ -0.6
GPC6-201ENST00000377047 MLNRO43193 412 aa11.31□□□□□ -0.6
GPC6-201ENST00000377047 LBHQ53QV2 105 aaPredicted RBP11.31□□□□□ -0.6
GPC6-201ENST00000377047 RALGAPA1Q6GYQ0 2036 aa11.31□□□□□ -0.6
GPC6-201ENST00000377047 ZNF600Q6ZNG1 722 aa11.31□□□□□ -0.6
GPC6-201ENST00000377047 SLC17A3O00476 420 aa11.31□□□□□ -0.6
GPC6-201ENST00000377047 PAX8Q06710 450 aa11.31□□□□□ -0.6
GPC6-201ENST00000377047 CBLN1P23435 193 aa11.31□□□□□ -0.6
GPC6-201ENST00000377047 GNG5P63218 68 aa11.31□□□□□ -0.6
GPC6-201ENST00000377047 ZNF385CQ66K41 422 aaPredicted RBP11.31□□□□□ -0.6
GPC6-201ENST00000377047 TOMM7Q9P0U1 55 aa11.31□□□□□ -0.6
GPC6-201ENST00000377047 TDGF1P13385 188 aa11.31□□□□□ -0.6
GPC6-201ENST00000377047 FER1L6-AS1Q8NA97 138 aa11.31□□□□□ -0.6
GPC6-201ENST00000377047 OR5AN1Q8NGI8 311 aa11.31□□□□□ -0.6
GPC6-201ENST00000377047 C18orf12Q96KH6 178 aa11.31□□□□□ -0.6
GPC6-201ENST00000377047 OTORQ9NRC9 128 aa11.31□□□□□ -0.6
GPC6-201ENST00000377047 ZNF318Q5VUA4 2279 aa11.31□□□□□ -0.6
GPC6-201ENST00000377047 LOC102724200A0A096LPH7 203 aaPredicted RBP11.3□□□□□ -0.6
GPC6-201ENST00000377047 PRR32B1ATL7 298 aa11.3□□□□□ -0.6
GPC6-201ENST00000377047 DUSP14O95147 198 aaKnown RBP11.3□□□□□ -0.6
GPC6-201ENST00000377047 ZNF506Q5JVG8 444 aa11.3□□□□□ -0.6
GPC6-201ENST00000377047 TNFRSF14Q92956 283 aa11.3□□□□□ -0.6
GPC6-201ENST00000377047 SLC50A1Q9BRV3 221 aa11.3□□□□□ -0.6
GPC6-201ENST00000377047 RPP21Q9H633 154 aaKnown RBP11.3□□□□□ -0.6
GPC6-201ENST00000377047 TMEM144Q7Z5S9 345 aa11.3□□□□□ -0.6
GPC6-201ENST00000377047 CRIM1Q9NZV1 1036 aa11.3□□□□□ -0.6
GPC6-201ENST00000377047 CACNA1EQ15878 2313 aa11.3□□□□□ -0.6
GPC6-201ENST00000377047 MST1P26927 711 aa11.3□□□□□ -0.6
GPC6-201ENST00000377047 HINT1P49773 126 aaPredicted RBP11.3□□□□□ -0.6
GPC6-201ENST00000377047 NABP1Q96AH0 204 aa11.3□□□□□ -0.6
GPC6-201ENST00000377047 C19orf67A6NJJ6 358 aa11.3□□□□□ -0.6
GPC6-201ENST00000377047 DEFB121Q5J5C9 76 aa11.3□□□□□ -0.6
GPC6-201ENST00000377047 ZNF525Q8N782 197 aa11.3□□□□□ -0.6
GPC6-201ENST00000377047 SSC4DQ8WTU2 575 aa11.3□□□□□ -0.6
GPC6-201ENST00000377047 Q6ZS92 163 aa11.3□□□□□ -0.6
GPC6-201ENST00000377047 THSD7BQ9C0I4 1608 aa11.3□□□□□ -0.6
GPC6-201ENST00000377047 TMEM250H0YL14 139 aa11.29□□□□□ -0.6
GPC6-201ENST00000377047 CLPSP04118 112 aa11.29□□□□□ -0.6
GPC6-201ENST00000377047 IGHV1-8P0DP01 117 aa11.29□□□□□ -0.6
GPC6-201ENST00000377047 CD33P20138 364 aa11.29□□□□□ -0.6
GPC6-201ENST00000377047 DUTP33316 252 aaKnown RBP11.29□□□□□ -0.6
GPC6-201ENST00000377047 ZNF324BQ6AW86 544 aaPredicted RBP11.29□□□□□ -0.6
GPC6-201ENST00000377047 BMPERQ8N8U9 685 aa11.29□□□□□ -0.6
GPC6-201ENST00000377047 HEATR5BQ9P2D3 2071 aa11.29□□□□□ -0.6
GPC6-201ENST00000377047 SP5Q6BEB4 398 aaPredicted RBP11.29□□□□□ -0.6
GPC6-201ENST00000377047 CIARTQ8N365 385 aaPredicted RBP11.29□□□□□ -0.6
GPC6-201ENST00000377047 JOSD1Q15040 202 aaPredicted RBP11.29□□□□□ -0.6
GPC6-201ENST00000377047 ATOH7Q8N100 152 aa11.29□□□□□ -0.6
GPC6-201ENST00000377047 SCGB3A1Q96QR1 104 aa11.29□□□□□ -0.6
GPC6-201ENST00000377047 COL4A6Q14031 1691 aa11.29□□□□□ -0.6
GPC6-201ENST00000377047 A0A1B0GUT8 65 aa11.29□□□□□ -0.6
GPC6-201ENST00000377047 SRRM5B3KS81 715 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms