RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 FAM208BQ5VWN6 2430 aa11.32□□□□□ -0.6
C9orf47-203ENST00000375851 MYLKQ15746 1914 aa11.32□□□□□ -0.6
C9orf47-203ENST00000375851 LY6G6EA0A0G2JKS1 128 aa11.32□□□□□ -0.6
C9orf47-203ENST00000375851 M0QZK8 103 aa11.32□□□□□ -0.6
C9orf47-203ENST00000375851 GGCTO75223 188 aaKnown RBP11.32□□□□□ -0.6
C9orf47-203ENST00000375851 IGHG3P01860 377 aa11.32□□□□□ -0.6
C9orf47-203ENST00000375851 TCTAP57738 103 aa11.32□□□□□ -0.6
C9orf47-203ENST00000375851 Q6ZS92 163 aa11.32□□□□□ -0.6
C9orf47-203ENST00000375851 C5orf24Q7Z6I8 188 aa11.32□□□□□ -0.6
C9orf47-203ENST00000375851 WFIKKN1Q96NZ8 548 aa11.32□□□□□ -0.6
C9orf47-203ENST00000375851 AUP1Q9Y679 476 aa11.32□□□□□ -0.6
C9orf47-203ENST00000375851 U3KQA8 63 aa11.32□□□□□ -0.6
C9orf47-203ENST00000375851 PEX7O00628 323 aa11.32□□□□□ -0.6
C9orf47-203ENST00000375851 DLX1P56177 255 aa11.32□□□□□ -0.6
C9orf47-203ENST00000375851 HGFACQ04756 655 aa11.32□□□□□ -0.6
C9orf47-203ENST00000375851 SDF2L1Q9HCN8 221 aa11.32□□□□□ -0.6
C9orf47-203ENST00000375851 MBD3L4A6NDZ8 208 aaPredicted RBP11.32□□□□□ -0.6
C9orf47-203ENST00000375851 MBD3L3A6NE82 208 aaPredicted RBP11.32□□□□□ -0.6
C9orf47-203ENST00000375851 MBD3L5A6NJ08 208 aaPredicted RBP11.32□□□□□ -0.6
C9orf47-203ENST00000375851 FGF16O43320 207 aa11.32□□□□□ -0.6
C9orf47-203ENST00000375851 MBD3L2Q8NHZ7 208 aaPredicted RBP11.32□□□□□ -0.6
C9orf47-203ENST00000375851 WFDC1Q9HC57 220 aa11.32□□□□□ -0.6
C9orf47-203ENST00000375851 IGHV3-66A0A0C4DH42 116 aa11.31□□□□□ -0.6
C9orf47-203ENST00000375851 WISP1O95388 367 aa11.31□□□□□ -0.6
C9orf47-203ENST00000375851 TGFAP01135 160 aa11.31□□□□□ -0.6
C9orf47-203ENST00000375851 IGKV3-15P01624 115 aa11.31□□□□□ -0.6
C9orf47-203ENST00000375851 NMUP48645 174 aa11.31□□□□□ -0.6
C9orf47-203ENST00000375851 TEX45Q8NA69 505 aa11.31□□□□□ -0.6
C9orf47-203ENST00000375851 ZNF581Q9P0T4 197 aa11.31□□□□□ -0.6
C9orf47-203ENST00000375851 IGHV3OR16-12A0A075B7B8 117 aa11.31□□□□□ -0.6
C9orf47-203ENST00000375851 TRBV9A0A0B4J1U6 114 aa11.31□□□□□ -0.6
C9orf47-203ENST00000375851 ETV2O00321 342 aaPredicted RBP11.31□□□□□ -0.6
C9orf47-203ENST00000375851 AP5S1Q9NUS5 200 aa11.31□□□□□ -0.6
C9orf47-203ENST00000375851 WDR83OSQ9Y284 106 aa11.31□□□□□ -0.6
C9orf47-203ENST00000375851 THBDP07204 575 aa11.31□□□□□ -0.6
C9orf47-203ENST00000375851 SRSF3P84103 164 aaKnown RBP11.31□□□□□ -0.6
C9orf47-203ENST00000375851 HIST1H1AQ02539 215 aaPredicted RBP11.31□□□□□ -0.6
C9orf47-203ENST00000375851 TCF24Q7RTU0 167 aa11.31□□□□□ -0.6
C9orf47-203ENST00000375851 SYT8Q8NBV8 401 aa11.31□□□□□ -0.6
C9orf47-203ENST00000375851 METRNQ9UJH8 293 aa11.31□□□□□ -0.6
C9orf47-203ENST00000375851 PRCDQ00LT1 54 aa11.3□□□□□ -0.6
C9orf47-203ENST00000375851 ZNF672Q499Z4 452 aaPredicted RBP11.3□□□□□ -0.6
C9orf47-203ENST00000375851 MAP1LC3AQ9H492 121 aa11.3□□□□□ -0.6
C9orf47-203ENST00000375851 FOXA3P55318 350 aaPredicted RBP11.3□□□□□ -0.6
C9orf47-203ENST00000375851 CD177Q8N6Q3 437 aa11.3□□□□□ -0.6
C9orf47-203ENST00000375851 CD69Q07108 199 aa11.3□□□□□ -0.6
C9orf47-203ENST00000375851 HEPN1Q6WQI6 88 aa11.3□□□□□ -0.6
C9orf47-203ENST00000375851 HBBP68871 147 aa11.3□□□□□ -0.6
C9orf47-203ENST00000375851 GTF3C1Q12789 2109 aa11.3□□□□□ -0.6
C9orf47-203ENST00000375851 ZNF502Q8TBZ5 544 aa11.3□□□□□ -0.6
C9orf47-203ENST00000375851 TICRRQ7Z2Z1 1910 aa11.29□□□□□ -0.6
C9orf47-203ENST00000375851 A0A0G2JLM5 398 aa11.29□□□□□ -0.6
C9orf47-203ENST00000375851 CCL20P78556 96 aa11.29□□□□□ -0.6
C9orf47-203ENST00000375851 PMCHL1Q16048 86 aa11.29□□□□□ -0.6
C9orf47-203ENST00000375851 ZNF524Q96C55 264 aa11.29□□□□□ -0.6
C9orf47-203ENST00000375851 DMRTA2Q96SC8 542 aa11.29□□□□□ -0.6
C9orf47-203ENST00000375851 IL36BQ9NZH7 164 aa11.29□□□□□ -0.6
C9orf47-203ENST00000375851 IGKV3-20P01619 116 aa11.29□□□□□ -0.6
C9orf47-203ENST00000375851 ACACBO00763 2458 aa11.29□□□□□ -0.6
C9orf47-203ENST00000375851 TIMM23O14925 209 aa11.29□□□□□ -0.6
C9orf47-203ENST00000375851 LYRM7Q5U5X0 104 aa11.29□□□□□ -0.6
C9orf47-203ENST00000375851 CLEC19AQ6UXS0 136 aa11.29□□□□□ -0.6
C9orf47-203ENST00000375851 A0A0G2JNJ9 132 aa11.29□□□□□ -0.6
C9orf47-203ENST00000375851 SNRPD3P62318 126 aaKnown RBP11.29□□□□□ -0.6
C9orf47-203ENST00000375851 RPL23P62829 140 aaKnown RBP11.29□□□□□ -0.6
C9orf47-203ENST00000375851 Q9UFV3 132 aa11.29□□□□□ -0.6
C9orf47-203ENST00000375851 HELZP42694 1942 aaKnown RBP11.28□□□□□ -0.6
C9orf47-203ENST00000375851 OR4C46A6NHA9 309 aa11.28□□□□□ -0.6
C9orf47-203ENST00000375851 SMAD7O15105 426 aaKnown RBP11.28□□□□□ -0.6
C9orf47-203ENST00000375851 TSPOP30536 169 aa11.28□□□□□ -0.6
C9orf47-203ENST00000375851 NMSQ5H8A3 153 aa11.28□□□□□ -0.6
C9orf47-203ENST00000375851 A6NDN8 102 aa11.28□□□□□ -0.6
C9orf47-203ENST00000375851 HLA-DRB1P01911 266 aa11.28□□□□□ -0.6
C9orf47-203ENST00000375851 ZNF474Q6S9Z5 364 aaPredicted RBP11.28□□□□□ -0.6
C9orf47-203ENST00000375851 SPG11Q96JI7 2443 aa11.28□□□□□ -0.6
C9orf47-203ENST00000375851 A0A087WWC5 75 aa11.28□□□□□ -0.6
C9orf47-203ENST00000375851 FAM90A9PA6NNJ1 464 aa11.28□□□□□ -0.6
C9orf47-203ENST00000375851 PSMB2P49721 201 aa11.28□□□□□ -0.6
C9orf47-203ENST00000375851 GCSAMLQ5JQS6 135 aa11.28□□□□□ -0.6
C9orf47-203ENST00000375851 RAX2Q96IS3 184 aa11.28□□□□□ -0.6
C9orf47-203ENST00000375851 C1QTNF9BB2RNN3 333 aa11.28□□□□□ -0.6
C9orf47-203ENST00000375851 MLNRO43193 412 aa11.28□□□□□ -0.6
C9orf47-203ENST00000375851 IGKV1-5P01602 117 aa11.28□□□□□ -0.6
C9orf47-203ENST00000375851 TAS2R60P59551 318 aa11.28□□□□□ -0.6
C9orf47-203ENST00000375851 C10orf55Q5SWW7 151 aa11.28□□□□□ -0.6
C9orf47-203ENST00000375851 Q6P435 159 aa11.28□□□□□ -0.6
C9orf47-203ENST00000375851 OR10AG1Q8NH19 301 aa11.28□□□□□ -0.6
C9orf47-203ENST00000375851 FOLR2P14207 255 aa11.27□□□□□ -0.6
C9orf47-203ENST00000375851 FAM53AQ6NSI3 398 aaPredicted RBP11.27□□□□□ -0.6
C9orf47-203ENST00000375851 FAM159AQ6UWV7 190 aa11.27□□□□□ -0.6
C9orf47-203ENST00000375851 LINC00518Q8N0U6 118 aa11.27□□□□□ -0.6
C9orf47-203ENST00000375851 OR10W1Q8NGF6 305 aa11.27□□□□□ -0.6
C9orf47-203ENST00000375851 TNFRSF14Q92956 283 aa11.27□□□□□ -0.6
C9orf47-203ENST00000375851 PROK2Q9HC23 129 aa11.27□□□□□ -0.6
C9orf47-203ENST00000375851 TMEM178BH3BS89 294 aa11.27□□□□□ -0.61
C9orf47-203ENST00000375851 IGHV3-11P01762 117 aa11.27□□□□□ -0.61
C9orf47-203ENST00000375851 Q9H3A6 140 aa11.27□□□□□ -0.61
C9orf47-203ENST00000375851 CYTL1Q9NRR1 136 aa11.27□□□□□ -0.61
C9orf47-203ENST00000375851 PLXNA4Q9HCM2 1894 aa11.27□□□□□ -0.61
C9orf47-203ENST00000375851 NPIPB6E9PJ23 425 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms