RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 FAM168AQ92567 244 aa11.54□□□□□ -0.56
CLCNKA-202ENST00000375692 NEUROG1Q92886 237 aa11.54□□□□□ -0.56
CLCNKA-202ENST00000375692 LINC00479Q96M42 142 aa11.54□□□□□ -0.56
CLCNKA-202ENST00000375692 CALYQ9NYX4 217 aa11.54□□□□□ -0.56
CLCNKA-202ENST00000375692 IGLV2-8P01709 118 aa11.54□□□□□ -0.56
CLCNKA-202ENST00000375692 MRPS11P82912 194 aaKnown RBP11.54□□□□□ -0.56
CLCNKA-202ENST00000375692 DUX4L9Q6RFH8 374 aaPredicted RBP11.54□□□□□ -0.56
CLCNKA-202ENST00000375692 GCSAMQ8N6F7 178 aa11.54□□□□□ -0.56
CLCNKA-202ENST00000375692 STARD4Q96DR4 205 aa11.54□□□□□ -0.56
CLCNKA-202ENST00000375692 ZNF71Q9NQZ8 489 aaPredicted RBP11.54□□□□□ -0.56
CLCNKA-202ENST00000375692 CLCF1Q9UBD9 225 aa11.54□□□□□ -0.56
CLCNKA-202ENST00000375692 OR51B2Q9Y5P1 312 aa11.54□□□□□ -0.56
CLCNKA-202ENST00000375692 F2RL2O00254 374 aa11.53□□□□□ -0.56
CLCNKA-202ENST00000375692 KIR2DL2P43627 348 aaPredicted RBP11.53□□□□□ -0.56
CLCNKA-202ENST00000375692 ATRXP46100 2492 aa11.53□□□□□ -0.56
CLCNKA-202ENST00000375692 RAB7AP51149 207 aa11.53□□□□□ -0.56
CLCNKA-202ENST00000375692 ARFGEF3Q5TH69 2177 aa11.53□□□□□ -0.56
CLCNKA-202ENST00000375692 LYG1Q8N1E2 194 aa11.53□□□□□ -0.56
CLCNKA-202ENST00000375692 OR4B1Q8NGF8 309 aa11.53□□□□□ -0.56
CLCNKA-202ENST00000375692 KCNS1Q96KK3 526 aa11.53□□□□□ -0.56
CLCNKA-202ENST00000375692 SSBP3Q9BWW4 388 aaPredicted RBP11.53□□□□□ -0.56
CLCNKA-202ENST00000375692 CDC42EP3Q9UKI2 254 aa11.53□□□□□ -0.56
CLCNKA-202ENST00000375692 FOXA2Q9Y261 457 aaPredicted RBP11.53□□□□□ -0.56
CLCNKA-202ENST00000375692 TRAV34A0A0B4J273 112 aa11.53□□□□□ -0.56
CLCNKA-202ENST00000375692 IGHV2OR16-5A0A0B4J2B6 119 aa11.53□□□□□ -0.56
CLCNKA-202ENST00000375692 SRRM5B3KS81 715 aa11.53□□□□□ -0.56
CLCNKA-202ENST00000375692 C3orf79P0CE67 100 aa11.53□□□□□ -0.56
CLCNKA-202ENST00000375692 NTF3P20783 257 aa11.53□□□□□ -0.56
CLCNKA-202ENST00000375692 MAJINQ3KP22 176 aa11.53□□□□□ -0.56
CLCNKA-202ENST00000375692 COL5A1-AS1Q5SY13 56 aa11.53□□□□□ -0.56
CLCNKA-202ENST00000375692 WDR73Q6P4I2 378 aa11.53□□□□□ -0.56
CLCNKA-202ENST00000375692 IGFL3Q6UXB1 125 aa11.53□□□□□ -0.56
CLCNKA-202ENST00000375692 NIT1Q86X76 327 aa11.53□□□□□ -0.56
CLCNKA-202ENST00000375692 STPG4Q8N801 248 aa11.53□□□□□ -0.56
CLCNKA-202ENST00000375692 OR9G1Q8NH87 305 aa11.53□□□□□ -0.56
CLCNKA-202ENST00000375692 PLEKHA3Q9HB20 300 aa11.53□□□□□ -0.56
CLCNKA-202ENST00000375692 OSTCQ9NRP0 149 aa11.53□□□□□ -0.56
CLCNKA-202ENST00000375692 INTS1Q8N201 2190 aaKnown RBP11.52□□□□□ -0.56
CLCNKA-202ENST00000375692 SPTA1P02549 2419 aa11.52□□□□□ -0.56
CLCNKA-202ENST00000375692 TRAV5A0A0B4J249 113 aa11.52□□□□□ -0.56
CLCNKA-202ENST00000375692 IGHV1-18A0A0C4DH31 117 aa11.52□□□□□ -0.56
CLCNKA-202ENST00000375692 C17orf58Q2M2W7 97 aa11.52□□□□□ -0.56
CLCNKA-202ENST00000375692 OR10J3Q5JRS4 329 aa11.52□□□□□ -0.56
CLCNKA-202ENST00000375692 IBA57Q5T440 356 aaKnown RBP11.52□□□□□ -0.56
CLCNKA-202ENST00000375692 LCN12Q6JVE5 192 aa11.52□□□□□ -0.56
CLCNKA-202ENST00000375692 C11orf42Q8N5U0 333 aa11.52□□□□□ -0.56
CLCNKA-202ENST00000375692 C9orf106Q8NAJ2 232 aa11.52□□□□□ -0.56
CLCNKA-202ENST00000375692 TMEM167BQ9NRX6 74 aa11.52□□□□□ -0.56
CLCNKA-202ENST00000375692 TECRQ9NZ01 308 aaKnown RBP11.52□□□□□ -0.56
CLCNKA-202ENST00000375692 ZNRD1Q9P1U0 126 aa11.52□□□□□ -0.56
CLCNKA-202ENST00000375692 SLC25A10Q9UBX3 287 aaPredicted RBP11.52□□□□□ -0.56
CLCNKA-202ENST00000375692 J3QR06 171 aa11.52□□□□□ -0.57
CLCNKA-202ENST00000375692 K7ENP7 123 aa11.52□□□□□ -0.57
CLCNKA-202ENST00000375692 HYPMO75409 117 aa11.52□□□□□ -0.57
CLCNKA-202ENST00000375692 ZNF324O75467 553 aaPredicted RBP11.52□□□□□ -0.57
CLCNKA-202ENST00000375692 MT-ND6P03923 174 aa11.52□□□□□ -0.57
CLCNKA-202ENST00000375692 SFTPCP11686 197 aa11.52□□□□□ -0.57
CLCNKA-202ENST00000375692 CHRNB4P30926 498 aa11.52□□□□□ -0.57
CLCNKA-202ENST00000375692 KIR2DS2P43631 304 aa11.52□□□□□ -0.57
CLCNKA-202ENST00000375692 GNG10P50151 68 aa11.52□□□□□ -0.57
CLCNKA-202ENST00000375692 PRR31Q5SQ13 230 aa11.52□□□□□ -0.57
CLCNKA-202ENST00000375692 MORN5Q5VZ52 161 aa11.52□□□□□ -0.57
CLCNKA-202ENST00000375692 MOGAT3Q86VF5 341 aa11.52□□□□□ -0.57
CLCNKA-202ENST00000375692 TSKUQ8WUA8 353 aa11.52□□□□□ -0.57
CLCNKA-202ENST00000375692 SIAH2O43255 324 aa11.51□□□□□ -0.57
CLCNKA-202ENST00000375692 AMY1AP04745 511 aa11.51□□□□□ -0.57
CLCNKA-202ENST00000375692 SLAQ13239 276 aa11.51□□□□□ -0.57
CLCNKA-202ENST00000375692 TBR1Q16650 682 aa11.51□□□□□ -0.57
CLCNKA-202ENST00000375692 CR1LQ2VPA4 569 aa11.51□□□□□ -0.57
CLCNKA-202ENST00000375692 Q6ZN92 141 aa11.51□□□□□ -0.57
CLCNKA-202ENST00000375692 Q6ZS92 163 aa11.51□□□□□ -0.57
CLCNKA-202ENST00000375692 DCAF16Q9NXF7 216 aa11.51□□□□□ -0.57
CLCNKA-202ENST00000375692 DSCAMO60469 2012 aa11.51□□□□□ -0.57
CLCNKA-202ENST00000375692 DPRXA6NFQ7 191 aa11.51□□□□□ -0.57
CLCNKA-202ENST00000375692 SRRM4A7MD48 611 aaKnown RBP11.51□□□□□ -0.57
CLCNKA-202ENST00000375692 ISLRO14498 428 aa11.51□□□□□ -0.57
CLCNKA-202ENST00000375692 TCF21O43680 179 aa11.51□□□□□ -0.57
CLCNKA-202ENST00000375692 IGHG3P01860 377 aa11.51□□□□□ -0.57
CLCNKA-202ENST00000375692 IGKV1-16P04430 117 aa11.51□□□□□ -0.57
CLCNKA-202ENST00000375692 OR5G3P0C626 314 aa11.51□□□□□ -0.57
CLCNKA-202ENST00000375692 IGLC2P0DOY2 106 aa11.51□□□□□ -0.57
CLCNKA-202ENST00000375692 IGLC3P0DOY3 106 aa11.51□□□□□ -0.57
CLCNKA-202ENST00000375692 SLC35E1Q96K37 410 aa11.51□□□□□ -0.57
CLCNKA-202ENST00000375692 OR2V2Q96R30 315 aa11.51□□□□□ -0.57
CLCNKA-202ENST00000375692 TXN2Q99757 166 aa11.51□□□□□ -0.57
CLCNKA-202ENST00000375692 YLPM1P49750 1951 aaKnown RBP11.5□□□□□ -0.57
CLCNKA-202ENST00000375692 SMIM27A0A1W2PRY6 76 aa11.5□□□□□ -0.57
CLCNKA-202ENST00000375692 NDUFB8O95169 186 aa11.5□□□□□ -0.57
CLCNKA-202ENST00000375692 APCSP02743 223 aa11.5□□□□□ -0.57
CLCNKA-202ENST00000375692 FAM87AP0C7U9 286 aa11.5□□□□□ -0.57
CLCNKA-202ENST00000375692 LINC00614P0C842 121 aa11.5□□□□□ -0.57
CLCNKA-202ENST00000375692 CGB3P0DN86 165 aa11.5□□□□□ -0.57
CLCNKA-202ENST00000375692 CGB7P0DN87 165 aa11.5□□□□□ -0.57
CLCNKA-202ENST00000375692 PRRX1P54821 245 aa11.5□□□□□ -0.57
CLCNKA-202ENST00000375692 C21orf62-AS1Q17RA5 79 aa11.5□□□□□ -0.57
CLCNKA-202ENST00000375692 OR10W1Q8NGF6 305 aa11.5□□□□□ -0.57
CLCNKA-202ENST00000375692 PPP1R35Q8TAP8 253 aa11.5□□□□□ -0.57
CLCNKA-202ENST00000375692 IGF2BP2-AS1Q96M15 143 aa11.5□□□□□ -0.57
CLCNKA-202ENST00000375692 USF1P22415 310 aaPredicted RBP11.5□□□□□ -0.57
CLCNKA-202ENST00000375692 PPOXP50336 477 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms