RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 TMEM186Q96B77 213 aa14.01□□□□□ -0.17
VARS-215ENST00000375663 KLF2Q9Y5W3 355 aaPredicted RBP14.01□□□□□ -0.17
VARS-215ENST00000375663 COL4A3Q01955 1670 aa14.01□□□□□ -0.17
VARS-215ENST00000375663 GAGE10A6NGK3 116 aa14.01□□□□□ -0.17
VARS-215ENST00000375663 C1orf162Q8NEQ5 155 aaPredicted RBP14.01□□□□□ -0.17
VARS-215ENST00000375663 OR9G1Q8NH87 305 aa14.01□□□□□ -0.17
VARS-215ENST00000375663 RAB1BQ9H0U4 201 aa14.01□□□□□ -0.17
VARS-215ENST00000375663 NCOA6Q14686 2063 aaPredicted RBP14.01□□□□□ -0.17
VARS-215ENST00000375663 C9orf172C9J069 976 aa14□□□□□ -0.17
VARS-215ENST00000375663 MUC15Q8N387 334 aa14□□□□□ -0.17
VARS-215ENST00000375663 CLEC5AQ9NY25 188 aa14□□□□□ -0.17
VARS-215ENST00000375663 LAMTOR2Q9Y2Q5 125 aa14□□□□□ -0.17
VARS-215ENST00000375663 PAX9P55771 341 aa14□□□□□ -0.17
VARS-215ENST00000375663 ACSF3Q4G176 576 aaPredicted RBP14□□□□□ -0.17
VARS-215ENST00000375663 CACNG8Q8WXS5 425 aa14□□□□□ -0.17
VARS-215ENST00000375663 OSTCQ9NRP0 149 aa14□□□□□ -0.17
VARS-215ENST00000375663 SAA2-SAA4A0A096LPE2 208 aa14□□□□□ -0.17
VARS-215ENST00000375663 SAA2P0DJI9 122 aaPredicted RBP14□□□□□ -0.17
VARS-215ENST00000375663 GPR6P46095 362 aaPredicted RBP14□□□□□ -0.17
VARS-215ENST00000375663 ZNF585BQ52M93 769 aa14□□□□□ -0.17
VARS-215ENST00000375663 BEND2Q8NDZ0 799 aa14□□□□□ -0.17
VARS-215ENST00000375663 KIAA1671Q9BY89 1806 aa14□□□□□ -0.17
VARS-215ENST00000375663 SONP18583 2426 aaKnown RBP14□□□□□ -0.17
VARS-215ENST00000375663 CKS2P33552 79 aa13.99□□□□□ -0.17
VARS-215ENST00000375663 LGALS7P47929 136 aa13.99□□□□□ -0.17
VARS-215ENST00000375663 TIMM23BQ5SRD1 257 aa13.99□□□□□ -0.17
VARS-215ENST00000375663 Q6P435 159 aa13.99□□□□□ -0.17
VARS-215ENST00000375663 MUC6Q6W4X9 2439 aa13.99□□□□□ -0.17
VARS-215ENST00000375663 IZUMO1RA6ND01 250 aa13.99□□□□□ -0.17
VARS-215ENST00000375663 CD33P20138 364 aa13.99□□□□□ -0.17
VARS-215ENST00000375663 COL25A1Q9BXS0 654 aaPredicted RBP13.99□□□□□ -0.17
VARS-215ENST00000375663 AP5S1Q9NUS5 200 aa13.99□□□□□ -0.17
VARS-215ENST00000375663 IL18BPO95998 194 aa13.99□□□□□ -0.17
VARS-215ENST00000375663 C1orf194Q5T5A4 169 aa13.99□□□□□ -0.17
VARS-215ENST00000375663 LYPD6Q86Y78 171 aa13.99□□□□□ -0.17
VARS-215ENST00000375663 OR4C46A6NHA9 309 aa13.99□□□□□ -0.17
VARS-215ENST00000375663 LIPFP07098 398 aa13.99□□□□□ -0.17
VARS-215ENST00000375663 FCGR2BP31994 310 aaPredicted RBP13.99□□□□□ -0.17
VARS-215ENST00000375663 Q0VFX4 171 aa13.99□□□□□ -0.17
VARS-215ENST00000375663 ACTL10Q5JWF8 245 aa13.99□□□□□ -0.17
VARS-215ENST00000375663 ST6GALNAC3Q8NDV1 305 aa13.99□□□□□ -0.17
VARS-215ENST00000375663 OR10AG1Q8NH19 301 aa13.99□□□□□ -0.17
VARS-215ENST00000375663 ST6GALNAC6Q969X2 333 aa13.99□□□□□ -0.17
VARS-215ENST00000375663 RNF115Q9Y4L5 304 aa13.99□□□□□ -0.17
VARS-215ENST00000375663 HIGD1CA8MV81 97 aa13.98□□□□□ -0.17
VARS-215ENST00000375663 ZNF324O75467 553 aaPredicted RBP13.98□□□□□ -0.17
VARS-215ENST00000375663 PFN1P07737 140 aaKnown RBP13.98□□□□□ -0.17
VARS-215ENST00000375663 HILPDAQ9Y5L2 63 aa13.98□□□□□ -0.17
VARS-215ENST00000375663 TWIST1Q15672 202 aa13.98□□□□□ -0.17
VARS-215ENST00000375663 C9orf106Q8NAJ2 232 aa13.98□□□□□ -0.17
VARS-215ENST00000375663 SLC25A33Q9BSK2 321 aa13.98□□□□□ -0.17
VARS-215ENST00000375663 C1RLQ9NZP8 487 aa13.98□□□□□ -0.17
VARS-215ENST00000375663 FBLL1A6NHQ2 334 aaKnown RBP13.98□□□□□ -0.17
VARS-215ENST00000375663 LINC00205P59089 165 aa13.98□□□□□ -0.17
VARS-215ENST00000375663 NUTF2P61970 127 aaKnown RBP13.98□□□□□ -0.17
VARS-215ENST00000375663 FAM90A1Q86YD7 464 aa13.98□□□□□ -0.17
VARS-215ENST00000375663 UPK2O00526 184 aa13.97□□□□□ -0.17
VARS-215ENST00000375663 LYPD6BQ8NI32 183 aa13.97□□□□□ -0.17
VARS-215ENST00000375663 GNB1LQ9BYB4 327 aa13.97□□□□□ -0.17
VARS-215ENST00000375663 ELOVL5Q9NYP7 299 aa13.97□□□□□ -0.17
VARS-215ENST00000375663 A0A1W2PRE2 83 aa13.97□□□□□ -0.17
VARS-215ENST00000375663 TNFSF13O75888 250 aa13.97□□□□□ -0.17
VARS-215ENST00000375663 FTH1P19P0C7X4 201 aa13.97□□□□□ -0.17
VARS-215ENST00000375663 SAA1P0DJI8 122 aaPredicted RBP13.97□□□□□ -0.17
VARS-215ENST00000375663 KIR2DL2P43627 348 aaPredicted RBP13.97□□□□□ -0.17
VARS-215ENST00000375663 COLCA1Q6ZS62 124 aa13.97□□□□□ -0.17
VARS-215ENST00000375663 C2orf88Q9BSF0 95 aa13.97□□□□□ -0.17
VARS-215ENST00000375663 MRPL20Q9BYC9 149 aaKnown RBP13.97□□□□□ -0.17
VARS-215ENST00000375663 NUDT3O95989 172 aa13.97□□□□□ -0.17
VARS-215ENST00000375663 TFPI2P48307 235 aa13.97□□□□□ -0.17
VARS-215ENST00000375663 SPATA31B1PQ5VZV4 182 aa13.97□□□□□ -0.17
VARS-215ENST00000375663 CYYR1Q96J86 154 aa13.97□□□□□ -0.17
VARS-215ENST00000375663 LOXL4Q96JB6 756 aa13.97□□□□□ -0.17
VARS-215ENST00000375663 SEPSECSQ9HD40 501 aaKnown RBP13.97□□□□□ -0.17
VARS-215ENST00000375663 BMPERQ8N8U9 685 aa13.96□□□□□ -0.17
VARS-215ENST00000375663 OR52E5Q8NH55 327 aa13.96□□□□□ -0.17
VARS-215ENST00000375663 OR4A5Q8NH83 315 aa13.96□□□□□ -0.17
VARS-215ENST00000375663 WNK1Q9H4A3 2382 aa13.96□□□□□ -0.17
VARS-215ENST00000375663 LINC00473A8K010 186 aa13.96□□□□□ -0.17
VARS-215ENST00000375663 NPIPB11E5RHQ5 1161 aa13.96□□□□□ -0.17
VARS-215ENST00000375663 CA1P00915 261 aaPredicted RBP13.96□□□□□ -0.17
VARS-215ENST00000375663 COMPP49747 757 aaPredicted RBP13.96□□□□□ -0.17
VARS-215ENST00000375663 DNLZQ5SXM8 178 aa13.96□□□□□ -0.17
VARS-215ENST00000375663 SSBP4Q9BWG4 385 aaPredicted RBP13.96□□□□□ -0.17
VARS-215ENST00000375663 TM4SF5O14894 197 aa13.96□□□□□ -0.17
VARS-215ENST00000375663 SCGB1C2P0DMR2 95 aa13.96□□□□□ -0.17
VARS-215ENST00000375663 COL4A4P53420 1690 aaPredicted RBP13.96□□□□□ -0.18
VARS-215ENST00000375663 FAM90A9PA6NNJ1 464 aa13.96□□□□□ -0.18
VARS-215ENST00000375663 F5H697 171 aa13.96□□□□□ -0.18
VARS-215ENST00000375663 J3KRW8 73 aa13.96□□□□□ -0.18
VARS-215ENST00000375663 IGLV3-1P01715 115 aa13.96□□□□□ -0.18
VARS-215ENST00000375663 GPR82Q96P67 336 aa13.96□□□□□ -0.18
VARS-215ENST00000375663 SS18L1O75177 396 aaPredicted RBP13.95□□□□□ -0.18
VARS-215ENST00000375663 ZNF883P0CG24 379 aa13.95□□□□□ -0.18
VARS-215ENST00000375663 SPRR3Q9UBC9 169 aa13.95□□□□□ -0.18
VARS-215ENST00000375663 C15orf62A8K5M9 175 aa13.95□□□□□ -0.18
VARS-215ENST00000375663 GOSR1O95249 250 aa13.95□□□□□ -0.18
VARS-215ENST00000375663 PYYP10082 97 aa13.95□□□□□ -0.18
VARS-215ENST00000375663 MGST2Q99735 147 aa13.95□□□□□ -0.18
VARS-215ENST00000375663 MRPL37Q9BZE1 423 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms