RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 C11orf52Q96A22 123 aa10.01□□□□□ -0.81
PRPF4-202ENST00000374199 SIRT7Q9NRC8 400 aa10.01□□□□□ -0.81
PRPF4-202ENST00000374199 F11RQ9Y624 299 aaKnown RBP10.01□□□□□ -0.81
PRPF4-202ENST00000374199 NPPCP23582 126 aa10.01□□□□□ -0.81
PRPF4-202ENST00000374199 UBE2E1P51965 193 aa10.01□□□□□ -0.81
PRPF4-202ENST00000374199 SPNS3Q6ZMD2 512 aa10.01□□□□□ -0.81
PRPF4-202ENST00000374199 LINC00518Q8N0U6 118 aa10.01□□□□□ -0.81
PRPF4-202ENST00000374199 DYNAPQ8N1N2 210 aa10.01□□□□□ -0.81
PRPF4-202ENST00000374199 TVP23CQ96ET8 276 aa10.01□□□□□ -0.81
PRPF4-202ENST00000374199 SEPSECSQ9HD40 501 aaKnown RBP10.01□□□□□ -0.81
PRPF4-202ENST00000374199 TNCP24821 2201 aa10.01□□□□□ -0.81
PRPF4-202ENST00000374199 A0A1B0GV50 99 aa10.01□□□□□ -0.81
PRPF4-202ENST00000374199 SUB1P53999 127 aaKnown RBP eCLIP10.01□□□□□ -0.81
PRPF4-202ENST00000374199 PAX8Q06710 450 aa10.01□□□□□ -0.81
PRPF4-202ENST00000374199 MRPL41Q8IXM3 137 aaKnown RBP10.01□□□□□ -0.81
PRPF4-202ENST00000374199 ABHD5Q8WTS1 349 aa10.01□□□□□ -0.81
PRPF4-202ENST00000374199 MOSP00540 346 aa10□□□□□ -0.81
PRPF4-202ENST00000374199 ARF6P62330 175 aa10□□□□□ -0.81
PRPF4-202ENST00000374199 RAB31Q13636 194 aa10□□□□□ -0.81
PRPF4-202ENST00000374199 ZNF48Q96MX3 618 aaPredicted RBP10□□□□□ -0.81
PRPF4-202ENST00000374199 MRPL36Q9P0J6 103 aaKnown RBP10□□□□□ -0.81
PRPF4-202ENST00000374199 FUT9Q9Y231 359 aa10□□□□□ -0.81
PRPF4-202ENST00000374199 TACC2O95359 2948 aa10□□□□□ -0.81
PRPF4-202ENST00000374199 ZFP92A6NM28 416 aa10□□□□□ -0.81
PRPF4-202ENST00000374199 CORTO00230 105 aa10□□□□□ -0.81
PRPF4-202ENST00000374199 PDE6DO43924 150 aa10□□□□□ -0.81
PRPF4-202ENST00000374199 RPL27AP46776 148 aaKnown RBP10□□□□□ -0.81
PRPF4-202ENST00000374199 AKR1D1P51857 326 aa10□□□□□ -0.81
PRPF4-202ENST00000374199 RHOBP62745 196 aa10□□□□□ -0.81
PRPF4-202ENST00000374199 RUSC1-AS1Q66K80 236 aa10□□□□□ -0.81
PRPF4-202ENST00000374199 C10orf105Q8TEF2 133 aa10□□□□□ -0.81
PRPF4-202ENST00000374199 GATAD1Q8WUU5 269 aa10□□□□□ -0.81
PRPF4-202ENST00000374199 HIST1H2BAQ96A08 127 aa10□□□□□ -0.81
PRPF4-202ENST00000374199 FAM167A-AS1Q96KT0 104 aa10□□□□□ -0.81
PRPF4-202ENST00000374199 TRGV9Q99603 122 aa10□□□□□ -0.81
PRPF4-202ENST00000374199 MRPL32Q9BYC8 188 aaKnown RBP10□□□□□ -0.81
PRPF4-202ENST00000374199 ROS1P08922 2347 aa10□□□□□ -0.81
PRPF4-202ENST00000374199 TCRBV4S1A1TA0A5B7 111 aa9.99□□□□□ -0.81
PRPF4-202ENST00000374199 I3L2K1 104 aa9.99□□□□□ -0.81
PRPF4-202ENST00000374199 NBR2O15453 112 aa9.99□□□□□ -0.81
PRPF4-202ENST00000374199 DEFA4P12838 97 aa9.99□□□□□ -0.81
PRPF4-202ENST00000374199 COX7A1P24310 79 aa9.99□□□□□ -0.81
PRPF4-202ENST00000374199 RPL35P42766 123 aaKnown RBP9.99□□□□□ -0.81
PRPF4-202ENST00000374199 LHFPL4Q7Z7J7 247 aa9.99□□□□□ -0.81
PRPF4-202ENST00000374199 C1QL4Q86Z23 238 aa9.99□□□□□ -0.81
PRPF4-202ENST00000374199 ZNF843Q8N446 348 aa9.99□□□□□ -0.81
PRPF4-202ENST00000374199 BPESC1Q9GZL8 116 aa9.99□□□□□ -0.81
PRPF4-202ENST00000374199 METTL1Q9UBP6 276 aaKnown RBP9.99□□□□□ -0.81
PRPF4-202ENST00000374199 OPN1MWP04001 364 aa9.99□□□□□ -0.81
PRPF4-202ENST00000374199 ARL14EPLP0DKL9 152 aa9.99□□□□□ -0.81
PRPF4-202ENST00000374199 OPN1MW2P0DN77 364 aa9.99□□□□□ -0.81
PRPF4-202ENST00000374199 OPN1MW3P0DN78 364 aa9.99□□□□□ -0.81
PRPF4-202ENST00000374199 KLRD1Q13241 179 aa9.99□□□□□ -0.81
PRPF4-202ENST00000374199 MLANAQ16655 118 aa9.99□□□□□ -0.81
PRPF4-202ENST00000374199 CCDC144NLQ6NUI1 221 aa9.99□□□□□ -0.81
PRPF4-202ENST00000374199 NIPSNAP3BQ9BS92 247 aa9.99□□□□□ -0.81
PRPF4-202ENST00000374199 DOK5Q9P104 306 aa9.99□□□□□ -0.81
PRPF4-202ENST00000374199 IGHV3-72A0A0B4J1Y9 119 aa9.99□□□□□ -0.81
PRPF4-202ENST00000374199 TMEM37Q8WXS4 190 aa9.99□□□□□ -0.81
PRPF4-202ENST00000374199 EAF1Q96JC9 268 aaPredicted RBP9.99□□□□□ -0.81
PRPF4-202ENST00000374199 COL6A6A6NMZ7 2263 aa9.98□□□□□ -0.81
PRPF4-202ENST00000374199 F6UZH7 168 aa9.98□□□□□ -0.81
PRPF4-202ENST00000374199 MT-ND4LP03901 98 aa9.98□□□□□ -0.81
PRPF4-202ENST00000374199 GCHFRP30047 84 aa9.98□□□□□ -0.81
PRPF4-202ENST00000374199 PDLIM4P50479 330 aa9.98□□□□□ -0.81
PRPF4-202ENST00000374199 ETFRF1Q6IPR1 90 aa9.98□□□□□ -0.81
PRPF4-202ENST00000374199 RNF2Q99496 336 aa9.98□□□□□ -0.81
PRPF4-202ENST00000374199 NPIPB5A8MRT5 1133 aa9.98□□□□□ -0.81
PRPF4-202ENST00000374199 FCN1O00602 326 aa9.98□□□□□ -0.81
PRPF4-202ENST00000374199 ASPHD1Q5U4P2 390 aa9.98□□□□□ -0.81
PRPF4-202ENST00000374199 SPATA31B1PQ5VZV4 182 aa9.98□□□□□ -0.81
PRPF4-202ENST00000374199 OR2T6Q8NHC8 308 aa9.98□□□□□ -0.81
PRPF4-202ENST00000374199 NAT8Q9UHE5 227 aa9.98□□□□□ -0.81
PRPF4-202ENST00000374199 ZFHX3Q15911 3703 aa9.98□□□□□ -0.81
PRPF4-202ENST00000374199 ABCA2Q9BZC7 2435 aa9.98□□□□□ -0.81
PRPF4-202ENST00000374199 A0A096LNT2 108 aa9.97□□□□□ -0.81
PRPF4-202ENST00000374199 SELENOTP62341 195 aa9.97□□□□□ -0.81
PRPF4-202ENST00000374199 SSMEM1Q8WWF3 244 aa9.97□□□□□ -0.81
PRPF4-202ENST00000374199 SRSF12Q8WXF0 261 aaKnown RBP9.97□□□□□ -0.81
PRPF4-202ENST00000374199 SLC25A33Q9BSK2 321 aa9.97□□□□□ -0.81
PRPF4-202ENST00000374199 CLN5O75503 358 aa9.97□□□□□ -0.81
PRPF4-202ENST00000374199 OR10J1P30954 320 aa9.97□□□□□ -0.81
PRPF4-202ENST00000374199 PRB3Q04118 309 aaPredicted RBP9.97□□□□□ -0.81
PRPF4-202ENST00000374199 C5orf64Q2M2E5 130 aa9.97□□□□□ -0.81
PRPF4-202ENST00000374199 PATE2Q6UY27 113 aa9.97□□□□□ -0.81
PRPF4-202ENST00000374199 SLC25A2Q9BXI2 301 aa9.97□□□□□ -0.81
PRPF4-202ENST00000374199 DOPEY1Q5JWR5 2465 aa9.97□□□□□ -0.81
PRPF4-202ENST00000374199 PAGE4O60829 102 aa9.97□□□□□ -0.81
PRPF4-202ENST00000374199 FOXH1O75593 365 aa9.97□□□□□ -0.81
PRPF4-202ENST00000374199 OR2T10Q8NGZ9 312 aa9.97□□□□□ -0.81
PRPF4-202ENST00000374199 SSX3Q99909 188 aa9.97□□□□□ -0.81
PRPF4-202ENST00000374199 CTDSP1Q9GZU7 261 aa9.97□□□□□ -0.81
PRPF4-202ENST00000374199 PARLQ9H300 379 aa9.97□□□□□ -0.81
PRPF4-202ENST00000374199 RPS10P5Q9NQ39 176 aa9.97□□□□□ -0.81
PRPF4-202ENST00000374199 YTHDF2Q9Y5A9 579 aaKnown RBP9.97□□□□□ -0.81
PRPF4-202ENST00000374199 LY96Q9Y6Y9 160 aa9.97□□□□□ -0.81
PRPF4-202ENST00000374199 ABCA4P78363 2273 aa9.97□□□□□ -0.81
PRPF4-202ENST00000374199 SPTA1P02549 2419 aa9.96□□□□□ -0.81
PRPF4-202ENST00000374199 SNRNP70P08621 437 aaKnown RBP9.96□□□□□ -0.81
PRPF4-202ENST00000374199 EGR2P11161 476 aaPredicted RBP9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms