RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 NPPCP23582 126 aa11.94□□□□□ -0.5
LMX1B-202ENST00000373474 ATP5G2Q06055 141 aa11.94□□□□□ -0.5
LMX1B-202ENST00000373474 KIR3DL3Q8N743 410 aa11.94□□□□□ -0.5
LMX1B-202ENST00000373474 OSR1Q8TAX0 266 aaPredicted RBP11.94□□□□□ -0.5
LMX1B-202ENST00000373474 FOXI3A8MTJ6 420 aaPredicted RBP11.94□□□□□ -0.5
LMX1B-202ENST00000373474 H3BTX0 84 aa11.94□□□□□ -0.5
LMX1B-202ENST00000373474 MOSP00540 346 aa11.94□□□□□ -0.5
LMX1B-202ENST00000373474 NPIPB11E5RHQ5 1161 aa11.94□□□□□ -0.5
LMX1B-202ENST00000373474 HIST1H2BKO60814 126 aa11.94□□□□□ -0.5
LMX1B-202ENST00000373474 CEACAM4O75871 244 aa11.94□□□□□ -0.5
LMX1B-202ENST00000373474 HIST1H2BJP06899 126 aa11.94□□□□□ -0.5
LMX1B-202ENST00000373474 NBEAP1P0C6P0 100 aa11.94□□□□□ -0.5
LMX1B-202ENST00000373474 HIST1H2BOP23527 126 aa11.94□□□□□ -0.5
LMX1B-202ENST00000373474 HIST1H2BBP33778 126 aa11.94□□□□□ -0.5
LMX1B-202ENST00000373474 LEPP41159 167 aa11.94□□□□□ -0.5
LMX1B-202ENST00000373474 ATP5G3P48201 142 aa11.94□□□□□ -0.5
LMX1B-202ENST00000373474 HIST1H2BDP58876 126 aa11.94□□□□□ -0.5
LMX1B-202ENST00000373474 ERVK11-1P61568 191 aa11.94□□□□□ -0.5
LMX1B-202ENST00000373474 HIST1H2BCP62807 126 aa11.94□□□□□ -0.5
LMX1B-202ENST00000373474 HIST2H2BEQ16778 126 aa11.94□□□□□ -0.5
LMX1B-202ENST00000373474 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.94□□□□□ -0.5
LMX1B-202ENST00000373474 PEAR1Q5VY43 1037 aaPredicted RBP11.94□□□□□ -0.5
LMX1B-202ENST00000373474 WDR82Q6UXN9 313 aa11.94□□□□□ -0.5
LMX1B-202ENST00000373474 FAM90A1Q86YD7 464 aa11.94□□□□□ -0.5
LMX1B-202ENST00000373474 HIST1H2BHQ93079 126 aa11.94□□□□□ -0.5
LMX1B-202ENST00000373474 HIST1H2BNQ99877 126 aa11.94□□□□□ -0.5
LMX1B-202ENST00000373474 HIST1H2BMQ99879 126 aa11.94□□□□□ -0.5
LMX1B-202ENST00000373474 COLQQ9Y215 455 aaPredicted RBP11.94□□□□□ -0.5
LMX1B-202ENST00000373474 H0YIZ8 118 aa11.93□□□□□ -0.5
LMX1B-202ENST00000373474 HBDP02042 147 aa11.93□□□□□ -0.5
LMX1B-202ENST00000373474 EEF1AKMT3Q96AZ1 226 aa11.93□□□□□ -0.5
LMX1B-202ENST00000373474 EFEMP2O95967 443 aa11.93□□□□□ -0.5
LMX1B-202ENST00000373474 CECR9P0C854 216 aa11.93□□□□□ -0.5
LMX1B-202ENST00000373474 C1QL4Q86Z23 238 aa11.93□□□□□ -0.5
LMX1B-202ENST00000373474 GNB1LQ9BYB4 327 aa11.93□□□□□ -0.5
LMX1B-202ENST00000373474 RNF115Q9Y4L5 304 aa11.93□□□□□ -0.5
LMX1B-202ENST00000373474 F5P12259 2224 aa11.93□□□□□ -0.5
LMX1B-202ENST00000373474 TRAV21A0A0B4J279 112 aa11.93□□□□□ -0.5
LMX1B-202ENST00000373474 LINC00271P0C7V0 271 aa11.93□□□□□ -0.5
LMX1B-202ENST00000373474 ESDP10768 282 aa11.93□□□□□ -0.5
LMX1B-202ENST00000373474 SNRPD3P62318 126 aaKnown RBP11.93□□□□□ -0.5
LMX1B-202ENST00000373474 GDF15Q99988 308 aa11.93□□□□□ -0.5
LMX1B-202ENST00000373474 UMODP07911 640 aa11.93□□□□□ -0.5
LMX1B-202ENST00000373474 GLRXP35754 106 aa11.93□□□□□ -0.5
LMX1B-202ENST00000373474 PLPPR1Q8TBJ4 325 aa11.93□□□□□ -0.5
LMX1B-202ENST00000373474 MYOFQ9NZM1 2061 aa11.92□□□□□ -0.5
LMX1B-202ENST00000373474 PF4V1P10720 104 aa11.92□□□□□ -0.5
LMX1B-202ENST00000373474 LOC105371242A0A075B767 164 aa11.92□□□□□ -0.5
LMX1B-202ENST00000373474 TEX45Q8NA69 505 aa11.92□□□□□ -0.5
LMX1B-202ENST00000373474 FER1L6-AS1Q8NA97 138 aa11.92□□□□□ -0.5
LMX1B-202ENST00000373474 GBF1Q92538 1859 aa11.92□□□□□ -0.5
LMX1B-202ENST00000373474 LINC01549A6NIU2 74 aa11.92□□□□□ -0.5
LMX1B-202ENST00000373474 HIST1H2BLQ99880 126 aa11.92□□□□□ -0.5
LMX1B-202ENST00000373474 TMEM242Q9NWH2 141 aa11.92□□□□□ -0.5
LMX1B-202ENST00000373474 SMPXQ9UHP9 88 aa11.92□□□□□ -0.5
LMX1B-202ENST00000373474 WFDC1Q9HC57 220 aa11.92□□□□□ -0.5
LMX1B-202ENST00000373474 OSTCQ9NRP0 149 aa11.92□□□□□ -0.5
LMX1B-202ENST00000373474 IGKV1D-13A0A0B4J2D9 117 aa11.92□□□□□ -0.5
LMX1B-202ENST00000373474 KBTBD11-OT1A0A1B0GTJ5 212 aa11.92□□□□□ -0.5
LMX1B-202ENST00000373474 IGKV1-13P0DP09 117 aa11.92□□□□□ -0.5
LMX1B-202ENST00000373474 IGHV1-2P23083 117 aa11.92□□□□□ -0.5
LMX1B-202ENST00000373474 HEPN1Q6WQI6 88 aa11.92□□□□□ -0.5
LMX1B-202ENST00000373474 OR10W1Q8NGF6 305 aa11.92□□□□□ -0.5
LMX1B-202ENST00000373474 PSMB11A5LHX3 300 aa11.91□□□□□ -0.5
LMX1B-202ENST00000373474 HIST3H2BBQ8N257 126 aa11.91□□□□□ -0.5
LMX1B-202ENST00000373474 DMRTA2Q96SC8 542 aa11.91□□□□□ -0.5
LMX1B-202ENST00000373474 IGHV2OR16-5A0A0B4J2B6 119 aa11.91□□□□□ -0.5
LMX1B-202ENST00000373474 PLNP26678 52 aa11.91□□□□□ -0.5
LMX1B-202ENST00000373474 C1orf194Q5T5A4 169 aa11.91□□□□□ -0.5
LMX1B-202ENST00000373474 ZNF562Q6V9R5 426 aa11.91□□□□□ -0.5
LMX1B-202ENST00000373474 WBP1Q96G27 269 aa11.91□□□□□ -0.5
LMX1B-202ENST00000373474 LOC102723996A0A087X1L8 192 aa11.91□□□□□ -0.5
LMX1B-202ENST00000373474 IGHV3-48P01763 117 aa11.91□□□□□ -0.5
LMX1B-202ENST00000373474 ZNF497Q6ZNH5 498 aa11.91□□□□□ -0.5
LMX1B-202ENST00000373474 LURAP1LQ8IV03 231 aa11.91□□□□□ -0.5
LMX1B-202ENST00000373474 RNF182Q8N6D2 247 aa11.91□□□□□ -0.5
LMX1B-202ENST00000373474 NXT2Q9NPJ8 142 aaKnown RBP11.91□□□□□ -0.5
LMX1B-202ENST00000373474 DOCK3Q8IZD9 2030 aa11.91□□□□□ -0.5
LMX1B-202ENST00000373474 CCL20P78556 96 aa11.91□□□□□ -0.5
LMX1B-202ENST00000373474 S100A7L2Q5SY68 101 aa11.91□□□□□ -0.5
LMX1B-202ENST00000373474 RNASEH2CQ8TDP1 164 aaKnown RBP11.91□□□□□ -0.5
LMX1B-202ENST00000373474 PHLDA1Q8WV24 401 aaPredicted RBP11.91□□□□□ -0.5
LMX1B-202ENST00000373474 CITED2Q99967 270 aaPredicted RBP11.91□□□□□ -0.5
LMX1B-202ENST00000373474 B9A039 149 aa11.9□□□□□ -0.5
LMX1B-202ENST00000373474 ZNF883P0CG24 379 aa11.9□□□□□ -0.5
LMX1B-202ENST00000373474 LHX2P50458 406 aa11.9□□□□□ -0.5
LMX1B-202ENST00000373474 PSG7Q13046 419 aa11.9□□□□□ -0.5
LMX1B-202ENST00000373474 FDCSPQ8NFU4 85 aa11.9□□□□□ -0.5
LMX1B-202ENST00000373474 IGKV3OR2-268A0A0C4DH90 116 aa11.9□□□□□ -0.5
LMX1B-202ENST00000373474 PPBPP02775 128 aa11.9□□□□□ -0.5
LMX1B-202ENST00000373474 PAX1P15863 534 aa11.9□□□□□ -0.5
LMX1B-202ENST00000373474 HIGD1CA8MV81 97 aa11.9□□□□□ -0.5
LMX1B-202ENST00000373474 IGKCP01834 107 aa11.9□□□□□ -0.5
LMX1B-202ENST00000373474 A6NNC1 897 aa11.9□□□□□ -0.5
LMX1B-202ENST00000373474 CLEC2AQ6UVW9 174 aa11.9□□□□□ -0.5
LMX1B-202ENST00000373474 MIR17HGQ75NE6 70 aa11.9□□□□□ -0.5
LMX1B-202ENST00000373474 NCOR1P1Q9H4R4 102 aa11.9□□□□□ -0.5
LMX1B-202ENST00000373474 ZNF319Q9P2F9 582 aa11.9□□□□□ -0.5
LMX1B-202ENST00000373474 GGTLC3B5MD39 225 aa11.9□□□□□ -0.51
LMX1B-202ENST00000373474 SRSF1Q07955 248 aaKnown RBP eCLIP11.9□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms