RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 LHFPL4Q7Z7J7 247 aa20.05■□□□□ 0.8
CTSA-203ENST00000372459 PPP1R27Q86WC6 154 aa20.05■□□□□ 0.8
CTSA-203ENST00000372459 ZNF843Q8N446 348 aa20.05■□□□□ 0.8
CTSA-203ENST00000372459 SSMEM1Q8WWF3 244 aa20.05■□□□□ 0.8
CTSA-203ENST00000372459 CACNG8Q8WXS5 425 aa20.05■□□□□ 0.8
CTSA-203ENST00000372459 S100A9P06702 114 aaKnown RBP20.04■□□□□ 0.8
CTSA-203ENST00000372459 FBP1P09467 338 aa20.04■□□□□ 0.8
CTSA-203ENST00000372459 GPX4P36969 197 aaPredicted RBP20.04■□□□□ 0.8
CTSA-203ENST00000372459 RNASEH2CQ8TDP1 164 aaKnown RBP20.04■□□□□ 0.8
CTSA-203ENST00000372459 SIRPDQ9H106 197 aa20.04■□□□□ 0.8
CTSA-203ENST00000372459 HOXB4P17483 251 aaPredicted RBP20.04■□□□□ 0.8
CTSA-203ENST00000372459 GAMTQ14353 236 aa20.04■□□□□ 0.8
CTSA-203ENST00000372459 P2RX4Q99571 388 aa20.04■□□□□ 0.8
CTSA-203ENST00000372459 DEFA4P12838 97 aa20.03■□□□□ 0.8
CTSA-203ENST00000372459 COMPP49747 757 aaPredicted RBP20.03■□□□□ 0.8
CTSA-203ENST00000372459 PNRC1Q12796 327 aaPredicted RBP20.03■□□□□ 0.8
CTSA-203ENST00000372459 FAM90A2PQ658T7 463 aa20.03■□□□□ 0.8
CTSA-203ENST00000372459 STPG3Q8N7X2 389 aa20.03■□□□□ 0.8
CTSA-203ENST00000372459 CFHR4Q92496 578 aa20.03■□□□□ 0.8
CTSA-203ENST00000372459 FBXL15Q9H469 300 aa20.03■□□□□ 0.8
CTSA-203ENST00000372459 A0A1W2PRD5 423 aa20.03■□□□□ 0.8
CTSA-203ENST00000372459 A0A1W2PRF3 423 aa20.03■□□□□ 0.8
CTSA-203ENST00000372459 A0A1W2PRM7 423 aa20.03■□□□□ 0.8
CTSA-203ENST00000372459 SLC16A13Q7RTY0 426 aa20.03■□□□□ 0.8
CTSA-203ENST00000372459 ELOBQ15370 118 aa20.02■□□□□ 0.8
CTSA-203ENST00000372459 MINOS1Q5TGZ0 78 aa20.02■□□□□ 0.8
CTSA-203ENST00000372459 CCDC144NLQ6NUI1 221 aa20.02■□□□□ 0.8
CTSA-203ENST00000372459 SLC35E1Q96K37 410 aa20.02■□□□□ 0.8
CTSA-203ENST00000372459 TMPRSS5Q9H3S3 457 aa20.02■□□□□ 0.8
CTSA-203ENST00000372459 MANBALQ9NQG1 85 aa20.02■□□□□ 0.8
CTSA-203ENST00000372459 MINOS1-NBL1R4GNA1 71 aa20.02■□□□□ 0.8
CTSA-203ENST00000372459 DOPEY1Q5JWR5 2465 aa20.01■□□□□ 0.79
CTSA-203ENST00000372459 IGLC7A0M8Q6 106 aa20.01■□□□□ 0.79
CTSA-203ENST00000372459 ZNF727A8MUV8 499 aa20.01■□□□□ 0.79
CTSA-203ENST00000372459 OOSP1A8MZH6 123 aa20.01■□□□□ 0.79
CTSA-203ENST00000372459 FOXH1O75593 365 aa20.01■□□□□ 0.79
CTSA-203ENST00000372459 PSMB3P49720 205 aa20.01■□□□□ 0.79
CTSA-203ENST00000372459 LGALS4P56470 323 aa20.01■□□□□ 0.79
CTSA-203ENST00000372459 GNB1P62873 340 aa20.01■□□□□ 0.79
CTSA-203ENST00000372459 PLGLAQ15195 96 aa20.01■□□□□ 0.79
CTSA-203ENST00000372459 MLANAQ16655 118 aa20.01■□□□□ 0.79
CTSA-203ENST00000372459 TOX4O94842 621 aa20.01■□□□□ 0.79
CTSA-203ENST00000372459 PRR20EP86478 221 aa20.01■□□□□ 0.79
CTSA-203ENST00000372459 PRR20CP86479 221 aa20.01■□□□□ 0.79
CTSA-203ENST00000372459 PRR20DP86480 221 aa20.01■□□□□ 0.79
CTSA-203ENST00000372459 PRR20BP86481 221 aa20.01■□□□□ 0.79
CTSA-203ENST00000372459 PRR20AP86496 221 aa20.01■□□□□ 0.79
CTSA-203ENST00000372459 MMDQ15546 238 aa20.01■□□□□ 0.79
CTSA-203ENST00000372459 TMEM249Q2WGJ8 235 aa20.01■□□□□ 0.79
CTSA-203ENST00000372459 MOSP00540 346 aa20■□□□□ 0.79
CTSA-203ENST00000372459 RPS10P46783 165 aaKnown RBP20■□□□□ 0.79
CTSA-203ENST00000372459 Q8WTZ3 238 aa20■□□□□ 0.79
CTSA-203ENST00000372459 PIMREGQ9BSJ6 248 aa20■□□□□ 0.79
CTSA-203ENST00000372459 SLC45A2Q9UMX9 530 aa20■□□□□ 0.79
CTSA-203ENST00000372459 REG1AP05451 166 aa19.99■□□□□ 0.79
CTSA-203ENST00000372459 SSX2Q16385 188 aa19.99■□□□□ 0.79
CTSA-203ENST00000372459 ZNF114Q8NC26 417 aa19.99■□□□□ 0.79
CTSA-203ENST00000372459 FAM168AQ92567 244 aa19.99■□□□□ 0.79
CTSA-203ENST00000372459 IGKV1OR2-108A0A075B7D4 117 aa19.99■□□□□ 0.79
CTSA-203ENST00000372459 TMEM242Q9NWH2 141 aa19.99■□□□□ 0.79
CTSA-203ENST00000372459 NBR2O15453 112 aa19.98■□□□□ 0.79
CTSA-203ENST00000372459 MEF2BQ02080 365 aaPredicted RBP19.98■□□□□ 0.79
CTSA-203ENST00000372459 LINC00869P0C866 280 aa19.97■□□□□ 0.79
CTSA-203ENST00000372459 OR10J1P30954 320 aa19.97■□□□□ 0.79
CTSA-203ENST00000372459 RHOBP62745 196 aa19.97■□□□□ 0.79
CTSA-203ENST00000372459 NPBQ8NG41 125 aa19.97■□□□□ 0.79
CTSA-203ENST00000372459 OR2T6Q8NHC8 308 aa19.97■□□□□ 0.79
CTSA-203ENST00000372459 NANPQ8TBE9 248 aa19.97■□□□□ 0.79
CTSA-203ENST00000372459 NDUFS8O00217 210 aa19.97■□□□□ 0.79
CTSA-203ENST00000372459 KIAA0141Q14154 515 aaPredicted RBP19.97■□□□□ 0.79
CTSA-203ENST00000372459 OR2T10Q8NGZ9 312 aa19.97■□□□□ 0.79
CTSA-203ENST00000372459 ACY3Q96HD9 319 aa19.97■□□□□ 0.79
CTSA-203ENST00000372459 EAF1Q96JC9 268 aaPredicted RBP19.97■□□□□ 0.79
CTSA-203ENST00000372459 TBX15Q96SF7 602 aa19.97■□□□□ 0.79
CTSA-203ENST00000372459 FNDC4Q9H6D8 234 aaPredicted RBP19.97■□□□□ 0.79
CTSA-203ENST00000372459 TBL2Q9Y4P3 447 aaKnown RBP19.97■□□□□ 0.79
CTSA-203ENST00000372459 NDUFA3O95167 84 aa19.96■□□□□ 0.79
CTSA-203ENST00000372459 CXCL1P09341 107 aa19.96■□□□□ 0.79
CTSA-203ENST00000372459 STAG3L2P0CL84 134 aa19.96■□□□□ 0.79
CTSA-203ENST00000372459 STAG3L3P0CL85 134 aa19.96■□□□□ 0.79
CTSA-203ENST00000372459 AREGP15514 252 aa19.96■□□□□ 0.79
CTSA-203ENST00000372459 UBE2E1P51965 193 aa19.96■□□□□ 0.79
CTSA-203ENST00000372459 HES1Q14469 280 aa19.96■□□□□ 0.79
CTSA-203ENST00000372459 PVRIGQ6DKI7 326 aa19.96■□□□□ 0.79
CTSA-203ENST00000372459 ZNF343Q6P1L6 599 aa19.96■□□□□ 0.79
CTSA-203ENST00000372459 SRSF12Q8WXF0 261 aaKnown RBP19.96■□□□□ 0.79
CTSA-203ENST00000372459 POLR3KQ9Y2Y1 108 aaPredicted RBP19.96■□□□□ 0.79
CTSA-203ENST00000372459 AKAP6Q13023 2319 aa19.96■□□□□ 0.79
CTSA-203ENST00000372459 TEX22C9J3V5 150 aa19.95■□□□□ 0.78
CTSA-203ENST00000372459 FCN1O00602 326 aa19.95■□□□□ 0.78
CTSA-203ENST00000372459 RND2P52198 227 aa19.95■□□□□ 0.78
CTSA-203ENST00000372459 CD81P60033 236 aa19.95■□□□□ 0.78
CTSA-203ENST00000372459 ETFRF1Q6IPR1 90 aa19.95■□□□□ 0.78
CTSA-203ENST00000372459 ABHD5Q8WTS1 349 aa19.95■□□□□ 0.78
CTSA-203ENST00000372459 NDUFS6O75380 124 aaKnown RBP19.95■□□□□ 0.78
CTSA-203ENST00000372459 CLN5O75503 358 aa19.95■□□□□ 0.78
CTSA-203ENST00000372459 CXorf1O96002 111 aa19.95■□□□□ 0.78
CTSA-203ENST00000372459 ATP5J2P56134 94 aa19.95■□□□□ 0.78
CTSA-203ENST00000372459 CLEC2AQ6UVW9 174 aa19.95■□□□□ 0.78
CTSA-203ENST00000372459 OR1P1Q8NH06 330 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms