RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 OR4A16Q8NH70 328 aa9.37□□□□□ -0.91
TSPAN1-201ENST00000372003 VN1R17PQ8TDU5 208 aa9.37□□□□□ -0.91
TSPAN1-201ENST00000372003 CCL19Q99731 98 aa9.37□□□□□ -0.91
TSPAN1-201ENST00000372003 TMEM167BQ9NRX6 74 aa9.37□□□□□ -0.91
TSPAN1-201ENST00000372003 PAM16Q9Y3D7 125 aa9.37□□□□□ -0.91
TSPAN1-201ENST00000372003 V9GYV3 84 aa9.37□□□□□ -0.91
TSPAN1-201ENST00000372003 FBN2P35556 2912 aa9.37□□□□□ -0.91
TSPAN1-201ENST00000372003 LINC00473A8K010 186 aa9.36□□□□□ -0.91
TSPAN1-201ENST00000372003 DIRC3C9JPN6 131 aa9.36□□□□□ -0.91
TSPAN1-201ENST00000372003 SPINT2O43291 252 aa9.36□□□□□ -0.91
TSPAN1-201ENST00000372003 HLA-DQA1P01909 254 aa9.36□□□□□ -0.91
TSPAN1-201ENST00000372003 OR9G9P0C7N8 305 aa9.36□□□□□ -0.91
TSPAN1-201ENST00000372003 DUTP33316 252 aaKnown RBP9.36□□□□□ -0.91
TSPAN1-201ENST00000372003 ATP5IP56385 69 aaPredicted RBP9.36□□□□□ -0.91
TSPAN1-201ENST00000372003 KLF3P57682 345 aaPredicted RBP9.36□□□□□ -0.91
TSPAN1-201ENST00000372003 SUMO1P63165 101 aaKnown RBP9.36□□□□□ -0.91
TSPAN1-201ENST00000372003 GCSAMLQ5JQS6 135 aa9.36□□□□□ -0.91
TSPAN1-201ENST00000372003 Q8N976 141 aa9.36□□□□□ -0.91
TSPAN1-201ENST00000372003 ORAOV1Q8WV07 137 aa9.36□□□□□ -0.91
TSPAN1-201ENST00000372003 SLC35E1Q96K37 410 aa9.36□□□□□ -0.91
TSPAN1-201ENST00000372003 KCNS1Q96KK3 526 aa9.36□□□□□ -0.91
TSPAN1-201ENST00000372003 C19orf24Q9BVV8 132 aa9.36□□□□□ -0.91
TSPAN1-201ENST00000372003 MS4A5Q9H3V2 200 aa9.36□□□□□ -0.91
TSPAN1-201ENST00000372003 YTHDF2Q9Y5A9 579 aaKnown RBP9.36□□□□□ -0.91
TSPAN1-201ENST00000372003 PGPEP1LA6NFU8 196 aa9.35□□□□□ -0.91
TSPAN1-201ENST00000372003 B9A039 149 aa9.35□□□□□ -0.91
TSPAN1-201ENST00000372003 K7EN84 100 aa9.35□□□□□ -0.91
TSPAN1-201ENST00000372003 ISLRO14498 428 aa9.35□□□□□ -0.91
TSPAN1-201ENST00000372003 ITGB1BP1O14713 200 aa9.35□□□□□ -0.91
TSPAN1-201ENST00000372003 CDKN1AP38936 164 aa9.35□□□□□ -0.91
TSPAN1-201ENST00000372003 IER3P46695 156 aa9.35□□□□□ -0.91
TSPAN1-201ENST00000372003 RAB7AP51149 207 aa9.35□□□□□ -0.91
TSPAN1-201ENST00000372003 PRRX1P54821 245 aa9.35□□□□□ -0.91
TSPAN1-201ENST00000372003 PSG7Q13046 419 aa9.35□□□□□ -0.91
TSPAN1-201ENST00000372003 EFNB3Q15768 340 aa9.35□□□□□ -0.91
TSPAN1-201ENST00000372003 PRAMEF5Q5TYX0 476 aa9.35□□□□□ -0.91
TSPAN1-201ENST00000372003 PRAMEF6Q5VXH4 476 aa9.35□□□□□ -0.91
TSPAN1-201ENST00000372003 MIC13Q5XKP0 118 aa9.35□□□□□ -0.91
TSPAN1-201ENST00000372003 TEPPQ6URK8 271 aa9.35□□□□□ -0.91
TSPAN1-201ENST00000372003 ACP7Q6ZNF0 438 aa9.35□□□□□ -0.91
TSPAN1-201ENST00000372003 ZCCHC24Q8N2G6 241 aaKnown RBP9.35□□□□□ -0.91
TSPAN1-201ENST00000372003 PNKDQ8N490 385 aa9.35□□□□□ -0.91
TSPAN1-201ENST00000372003 OR5B3Q8NH48 314 aa9.35□□□□□ -0.91
TSPAN1-201ENST00000372003 UBALD1Q8TB05 177 aa9.35□□□□□ -0.91
TSPAN1-201ENST00000372003 COQ2Q96H96 371 aa9.35□□□□□ -0.91
TSPAN1-201ENST00000372003 CXXC4Q9H2H0 198 aa9.35□□□□□ -0.91
TSPAN1-201ENST00000372003 HEYLQ9NQ87 328 aaPredicted RBP9.35□□□□□ -0.91
TSPAN1-201ENST00000372003 MRPL27Q9P0M9 148 aaKnown RBP9.35□□□□□ -0.91
TSPAN1-201ENST00000372003 IL19Q9UHD0 177 aa9.35□□□□□ -0.91
TSPAN1-201ENST00000372003 JPT1Q9UK76 154 aa9.35□□□□□ -0.91
TSPAN1-201ENST00000372003 CADP27708 2225 aa9.35□□□□□ -0.91
TSPAN1-201ENST00000372003 NBPF19A0A087WUL8 3843 aa9.35□□□□□ -0.91
TSPAN1-201ENST00000372003 RRHO14718 337 aa9.34□□□□□ -0.91
TSPAN1-201ENST00000372003 TIMM8AO60220 97 aaPredicted RBP9.34□□□□□ -0.91
TSPAN1-201ENST00000372003 DEFA4P12838 97 aa9.34□□□□□ -0.91
TSPAN1-201ENST00000372003 OR5I1Q13606 314 aa9.34□□□□□ -0.91
TSPAN1-201ENST00000372003 PMCHL1Q16048 86 aa9.34□□□□□ -0.91
TSPAN1-201ENST00000372003 CR1LQ2VPA4 569 aa9.34□□□□□ -0.91
TSPAN1-201ENST00000372003 TDRG1Q3Y452 100 aa9.34□□□□□ -0.91
TSPAN1-201ENST00000372003 MBNL2Q5VZF2 373 aaKnown RBP9.34□□□□□ -0.91
TSPAN1-201ENST00000372003 DTX2Q86UW9 622 aa9.34□□□□□ -0.91
TSPAN1-201ENST00000372003 GNB4Q9HAV0 340 aa9.34□□□□□ -0.91
TSPAN1-201ENST00000372003 DYNLRB1Q9NP97 96 aa9.34□□□□□ -0.91
TSPAN1-201ENST00000372003 NRN1Q9NPD7 142 aa9.34□□□□□ -0.91
TSPAN1-201ENST00000372003 FBXL7Q9UJT9 491 aa9.34□□□□□ -0.91
TSPAN1-201ENST00000372003 MRPS16Q9Y3D3 137 aaKnown RBP9.34□□□□□ -0.91
TSPAN1-201ENST00000372003 ABCA4P78363 2273 aa9.34□□□□□ -0.91
TSPAN1-201ENST00000372003 CENPEQ02224 2701 aa9.34□□□□□ -0.91
TSPAN1-201ENST00000372003 HRNRQ86YZ3 2850 aaPredicted RBP9.34□□□□□ -0.91
TSPAN1-201ENST00000372003 IGLV3-9A0A075B6K5 115 aa9.34□□□□□ -0.91
TSPAN1-201ENST00000372003 C15orf65H3BRN8 121 aa9.34□□□□□ -0.91
TSPAN1-201ENST00000372003 IGHV3-13P01766 116 aa9.34□□□□□ -0.91
TSPAN1-201ENST00000372003 AMY1AP04745 511 aa9.34□□□□□ -0.91
TSPAN1-201ENST00000372003 IGLC2P0DOY2 106 aa9.34□□□□□ -0.91
TSPAN1-201ENST00000372003 IGLC3P0DOY3 106 aa9.34□□□□□ -0.91
TSPAN1-201ENST00000372003 GPR12P47775 334 aa9.34□□□□□ -0.91
TSPAN1-201ENST00000372003 GABRA2P47869 451 aa9.34□□□□□ -0.91
TSPAN1-201ENST00000372003 THBS3P49746 956 aa9.34□□□□□ -0.91
TSPAN1-201ENST00000372003 GNG4P50150 75 aa9.34□□□□□ -0.91
TSPAN1-201ENST00000372003 PRR20EP86478 221 aa9.34□□□□□ -0.91
TSPAN1-201ENST00000372003 PRR20CP86479 221 aa9.34□□□□□ -0.91
TSPAN1-201ENST00000372003 PRR20DP86480 221 aa9.34□□□□□ -0.91
TSPAN1-201ENST00000372003 PRR20BP86481 221 aa9.34□□□□□ -0.91
TSPAN1-201ENST00000372003 PRR20AP86496 221 aa9.34□□□□□ -0.91
TSPAN1-201ENST00000372003 RELBQ01201 579 aa9.34□□□□□ -0.91
TSPAN1-201ENST00000372003 AESQ08117 197 aa9.34□□□□□ -0.91
TSPAN1-201ENST00000372003 MZT1Q08AG7 82 aa9.34□□□□□ -0.91
TSPAN1-201ENST00000372003 TMEM136Q6ZRR5 245 aa9.34□□□□□ -0.91
TSPAN1-201ENST00000372003 OR2D3Q8NGH3 330 aa9.34□□□□□ -0.91
TSPAN1-201ENST00000372003 MRGPRDQ8TDS7 321 aa9.34□□□□□ -0.91
TSPAN1-201ENST00000372003 WIPF2Q8TF74 440 aaPredicted RBP9.34□□□□□ -0.91
TSPAN1-201ENST00000372003 NAT8BQ9UHF3 227 aa9.34□□□□□ -0.91
TSPAN1-201ENST00000372003 CDC42EP3Q9UKI2 254 aa9.34□□□□□ -0.91
TSPAN1-201ENST00000372003 TBL2Q9Y4P3 447 aaKnown RBP9.34□□□□□ -0.91
TSPAN1-201ENST00000372003 ASH1LQ9NR48 2969 aaKnown RBP9.33□□□□□ -0.92
TSPAN1-201ENST00000372003 HELTA6NFD8 242 aa9.33□□□□□ -0.92
TSPAN1-201ENST00000372003 SLC17A3O00476 420 aa9.33□□□□□ -0.92
TSPAN1-201ENST00000372003 ZNF324O75467 553 aaPredicted RBP9.33□□□□□ -0.92
TSPAN1-201ENST00000372003 AMTP48728 403 aa9.33□□□□□ -0.92
TSPAN1-201ENST00000372003 RPS16P62249 146 aaKnown RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms