RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 ARPC1AQ92747 370 aa13.33□□□□□ -0.27
PHGDH-202ENST00000369409 GGTLC1Q9BX51 225 aa13.33□□□□□ -0.27
PHGDH-202ENST00000369409 MEGF9Q9H1U4 602 aa13.33□□□□□ -0.27
PHGDH-202ENST00000369409 ITPR3Q14573 2671 aa13.33□□□□□ -0.28
PHGDH-202ENST00000369409 AGPAT2O15120 278 aa13.33□□□□□ -0.28
PHGDH-202ENST00000369409 TSPAN15O95858 294 aa13.33□□□□□ -0.28
PHGDH-202ENST00000369409 FBP1P09467 338 aa13.33□□□□□ -0.28
PHGDH-202ENST00000369409 RAB2AP61019 212 aa13.33□□□□□ -0.28
PHGDH-202ENST00000369409 GAMTQ14353 236 aa13.33□□□□□ -0.28
PHGDH-202ENST00000369409 TOR2AQ5JU69 321 aa13.33□□□□□ -0.28
PHGDH-202ENST00000369409 ZNF562Q6V9R5 426 aa13.33□□□□□ -0.28
PHGDH-202ENST00000369409 TMEM219Q86XT9 240 aa13.33□□□□□ -0.28
PHGDH-202ENST00000369409 EIF4E3Q8N5X7 224 aaKnown RBP13.33□□□□□ -0.28
PHGDH-202ENST00000369409 MISP3Q96FF7 219 aa13.33□□□□□ -0.28
PHGDH-202ENST00000369409 SRSF8Q9BRL6 282 aaKnown RBP13.33□□□□□ -0.28
PHGDH-202ENST00000369409 FNDC4Q9H6D8 234 aaPredicted RBP13.33□□□□□ -0.28
PHGDH-202ENST00000369409 F11RQ9Y624 299 aaKnown RBP13.33□□□□□ -0.28
PHGDH-202ENST00000369409 OR1P1Q8NH06 330 aa13.32□□□□□ -0.28
PHGDH-202ENST00000369409 PIFOQ8TCI5 191 aa13.32□□□□□ -0.28
PHGDH-202ENST00000369409 SLC35E1Q96K37 410 aa13.32□□□□□ -0.28
PHGDH-202ENST00000369409 SSX3Q99909 188 aa13.32□□□□□ -0.28
PHGDH-202ENST00000369409 ZFHX3Q15911 3703 aa13.32□□□□□ -0.28
PHGDH-202ENST00000369409 CSPG4Q6UVK1 2322 aa13.32□□□□□ -0.28
PHGDH-202ENST00000369409 RAB19A4D1S5 217 aa13.31□□□□□ -0.28
PHGDH-202ENST00000369409 HLA-DRB1P01911 266 aa13.31□□□□□ -0.28
PHGDH-202ENST00000369409 H2AFB1P0C5Y9 115 aa13.31□□□□□ -0.28
PHGDH-202ENST00000369409 GPX4P36969 197 aaPredicted RBP13.31□□□□□ -0.28
PHGDH-202ENST00000369409 CACNG8Q8WXS5 425 aa13.31□□□□□ -0.28
PHGDH-202ENST00000369409 ACY3Q96HD9 319 aa13.31□□□□□ -0.28
PHGDH-202ENST00000369409 RASL11BQ9BPW5 248 aa13.31□□□□□ -0.28
PHGDH-202ENST00000369409 SLC25A33Q9BSK2 321 aa13.31□□□□□ -0.28
PHGDH-202ENST00000369409 ITPR2Q14571 2701 aa13.31□□□□□ -0.28
PHGDH-202ENST00000369409 IGHV7-81A0A0B4J1V7 117 aa13.31□□□□□ -0.28
PHGDH-202ENST00000369409 NUDT19A8MXV4 375 aa13.31□□□□□ -0.28
PHGDH-202ENST00000369409 IGHV3-48P01763 117 aa13.31□□□□□ -0.28
PHGDH-202ENST00000369409 ZNF726P1Q15940 193 aa13.31□□□□□ -0.28
PHGDH-202ENST00000369409 MIC13Q5XKP0 118 aa13.31□□□□□ -0.28
PHGDH-202ENST00000369409 PVRIGQ6DKI7 326 aa13.31□□□□□ -0.28
PHGDH-202ENST00000369409 SSX7Q7RTT5 188 aa13.31□□□□□ -0.28
PHGDH-202ENST00000369409 TMEM144Q7Z5S9 345 aa13.31□□□□□ -0.28
PHGDH-202ENST00000369409 OR2T6Q8NHC8 308 aa13.31□□□□□ -0.28
PHGDH-202ENST00000369409 RCC1LQ96I51 464 aaKnown RBP13.31□□□□□ -0.28
PHGDH-202ENST00000369409 DMRT1Q9Y5R6 373 aa13.31□□□□□ -0.28
PHGDH-202ENST00000369409 PXMP4Q9Y6I8 212 aa13.31□□□□□ -0.28
PHGDH-202ENST00000369409 CCDC168Q8NDH2 2452 aa13.3□□□□□ -0.28
PHGDH-202ENST00000369409 IGKV1OR2-108A0A075B7D4 117 aa13.3□□□□□ -0.28
PHGDH-202ENST00000369409 CTRB1P17538 263 aa13.3□□□□□ -0.28
PHGDH-202ENST00000369409 CTRB2Q6GPI1 263 aa13.3□□□□□ -0.28
PHGDH-202ENST00000369409 HSPB9Q9BQS6 159 aa13.3□□□□□ -0.28
PHGDH-202ENST00000369409 MOB4Q9Y3A3 225 aa13.3□□□□□ -0.28
PHGDH-202ENST00000369409 FASNP49327 2511 aaKnown RBP13.3□□□□□ -0.28
PHGDH-202ENST00000369409 MDFIC2A0A1B0GVS7 189 aa13.29□□□□□ -0.28
PHGDH-202ENST00000369409 H3BUX3 64 aa13.29□□□□□ -0.28
PHGDH-202ENST00000369409 CORTO00230 105 aa13.29□□□□□ -0.28
PHGDH-202ENST00000369409 EIF3GO75821 320 aaKnown RBP eCLIP13.29□□□□□ -0.28
PHGDH-202ENST00000369409 MBP02144 154 aa13.29□□□□□ -0.28
PHGDH-202ENST00000369409 RAB31Q13636 194 aa13.29□□□□□ -0.28
PHGDH-202ENST00000369409 ASPHD1Q5U4P2 390 aa13.29□□□□□ -0.28
PHGDH-202ENST00000369409 SPSB3Q6PJ21 355 aa13.29□□□□□ -0.28
PHGDH-202ENST00000369409 CIARTQ8N365 385 aaPredicted RBP13.29□□□□□ -0.28
PHGDH-202ENST00000369409 RPP25LQ8N5L8 163 aaKnown RBP13.29□□□□□ -0.28
PHGDH-202ENST00000369409 C5orf56Q8N8D9 126 aa13.29□□□□□ -0.28
PHGDH-202ENST00000369409 SFT2D1Q8WV19 159 aa13.29□□□□□ -0.28
PHGDH-202ENST00000369409 RBM14Q96PK6 669 aaKnown RBP13.29□□□□□ -0.28
PHGDH-202ENST00000369409 WNT10AQ9GZT5 417 aa13.29□□□□□ -0.28
PHGDH-202ENST00000369409 TMEM231Q9H6L2 316 aa13.29□□□□□ -0.28
PHGDH-202ENST00000369409 SLC25A22Q9H936 323 aa13.29□□□□□ -0.28
PHGDH-202ENST00000369409 KCNIP2Q9NS61 270 aa13.29□□□□□ -0.28
PHGDH-202ENST00000369409 SH2D7A6NKC9 451 aaPredicted RBP13.29□□□□□ -0.28
PHGDH-202ENST00000369409 DEFA4P12838 97 aa13.29□□□□□ -0.28
PHGDH-202ENST00000369409 SRSF3P84103 164 aaKnown RBP13.29□□□□□ -0.28
PHGDH-202ENST00000369409 LY6EQ16553 131 aa13.29□□□□□ -0.28
PHGDH-202ENST00000369409 GCSAMLQ5JQS6 135 aa13.29□□□□□ -0.28
PHGDH-202ENST00000369409 CYB5R2Q6BCY4 276 aa13.29□□□□□ -0.28
PHGDH-202ENST00000369409 OR10G4Q8NGN3 311 aa13.29□□□□□ -0.28
PHGDH-202ENST00000369409 OR10G9Q8NGN4 311 aa13.29□□□□□ -0.28
PHGDH-202ENST00000369409 OR10G7Q8NGN6 311 aa13.29□□□□□ -0.28
PHGDH-202ENST00000369409 MRPL36Q9P0J6 103 aaKnown RBP13.29□□□□□ -0.28
PHGDH-202ENST00000369409 HECTD1Q9ULT8 2610 aa13.28□□□□□ -0.28
PHGDH-202ENST00000369409 IGHV3-21A0A0B4J1V1 117 aa13.28□□□□□ -0.28
PHGDH-202ENST00000369409 YIF1AO95070 293 aa13.28□□□□□ -0.28
PHGDH-202ENST00000369409 M6PRP20645 277 aa13.28□□□□□ -0.28
PHGDH-202ENST00000369409 ACOT6Q3I5F7 207 aaPredicted RBP13.28□□□□□ -0.28
PHGDH-202ENST00000369409 FAM122CQ6P4D5 195 aa13.28□□□□□ -0.28
PHGDH-202ENST00000369409 LCN15Q6UWW0 184 aa13.28□□□□□ -0.28
PHGDH-202ENST00000369409 STPG3Q8N7X2 389 aa13.28□□□□□ -0.28
PHGDH-202ENST00000369409 C22orf15Q8WYQ4 148 aa13.28□□□□□ -0.28
PHGDH-202ENST00000369409 SMAD7O15105 426 aaKnown RBP13.27□□□□□ -0.28
PHGDH-202ENST00000369409 OR10J1P30954 320 aa13.27□□□□□ -0.28
PHGDH-202ENST00000369409 RND2P52198 227 aa13.27□□□□□ -0.28
PHGDH-202ENST00000369409 B2MP61769 119 aa13.27□□□□□ -0.28
PHGDH-202ENST00000369409 CCL20P78556 96 aa13.27□□□□□ -0.28
PHGDH-202ENST00000369409 ETFRF1Q6IPR1 90 aa13.27□□□□□ -0.28
PHGDH-202ENST00000369409 UQCC3Q6UW78 93 aa13.27□□□□□ -0.28
PHGDH-202ENST00000369409 BCL6BQ8N143 479 aaPredicted RBP13.27□□□□□ -0.28
PHGDH-202ENST00000369409 LFNGQ8NES3 379 aa13.27□□□□□ -0.28
PHGDH-202ENST00000369409 NPIPB3Q92617 1050 aa13.27□□□□□ -0.28
PHGDH-202ENST00000369409 NARS2Q96I59 477 aaKnown RBP13.27□□□□□ -0.28
PHGDH-202ENST00000369409 LINC00052Q96N35 136 aa13.27□□□□□ -0.28
PHGDH-202ENST00000369409 ZNF469Q96JG9 3925 aaPredicted RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 161.1 ms