RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 IL6RP08887 468 aaPredicted RBP7.33□□□□□ -1.24
SYNE1-206ENST00000367253 COX6A1P12074 109 aa7.33□□□□□ -1.24
SYNE1-206ENST00000367253 DTX4Q9Y2E6 619 aa7.33□□□□□ -1.24
SYNE1-206ENST00000367253 SYNGR1O43759 233 aa7.32□□□□□ -1.24
SYNE1-206ENST00000367253 NDUFB4O95168 129 aa7.32□□□□□ -1.24
SYNE1-206ENST00000367253 NDUFB8O95169 186 aa7.32□□□□□ -1.24
SYNE1-206ENST00000367253 NCR2O95944 276 aa7.32□□□□□ -1.24
SYNE1-206ENST00000367253 IGLV3-19P01714 112 aa7.32□□□□□ -1.24
SYNE1-206ENST00000367253 CD1AP06126 327 aa7.32□□□□□ -1.24
SYNE1-206ENST00000367253 AGAP20933 346 aa7.32□□□□□ -1.24
SYNE1-206ENST00000367253 COL10A1Q03692 680 aa7.32□□□□□ -1.24
SYNE1-206ENST00000367253 FUT5Q11128 374 aa7.32□□□□□ -1.24
SYNE1-206ENST00000367253 MPV17L2Q567V2 206 aa7.32□□□□□ -1.24
SYNE1-206ENST00000367253 PLAUP00749 431 aa7.32□□□□□ -1.24
SYNE1-206ENST00000367253 CXCL2P19875 107 aa7.32□□□□□ -1.24
SYNE1-206ENST00000367253 MPV17P39210 176 aa7.32□□□□□ -1.24
SYNE1-206ENST00000367253 HSPE1P61604 102 aaKnown RBP7.32□□□□□ -1.24
SYNE1-206ENST00000367253 KLF9Q13886 244 aaPredicted RBP7.32□□□□□ -1.24
SYNE1-206ENST00000367253 TSPO2Q5TGU0 170 aa7.32□□□□□ -1.24
SYNE1-206ENST00000367253 ZNF660Q6AZW8 331 aaPredicted RBP7.32□□□□□ -1.24
SYNE1-206ENST00000367253 SPNS2Q8IVW8 549 aa7.32□□□□□ -1.24
SYNE1-206ENST00000367253 C18orf12Q96KH6 178 aa7.32□□□□□ -1.24
SYNE1-206ENST00000367253 FAM60AQ9NP50 221 aa7.32□□□□□ -1.24
SYNE1-206ENST00000367253 TDRD15B5MCY1 1934 aaKnown RBP7.32□□□□□ -1.24
SYNE1-206ENST00000367253 LIPT2A6NK58 231 aa7.32□□□□□ -1.24
SYNE1-206ENST00000367253 PAXXQ9BUH6 204 aa7.32□□□□□ -1.24
SYNE1-206ENST00000367253 GGTLC1Q9BX51 225 aa7.32□□□□□ -1.24
SYNE1-206ENST00000367253 PRR13Q9NZ81 148 aa7.32□□□□□ -1.24
SYNE1-206ENST00000367253 SIGLEC7Q9Y286 467 aa7.32□□□□□ -1.24
SYNE1-206ENST00000367253 A0A087WX48 190 aa7.32□□□□□ -1.24
SYNE1-206ENST00000367253 TRAV8-6A0A0B4J262 113 aa7.32□□□□□ -1.24
SYNE1-206ENST00000367253 H0YL77 283 aa7.32□□□□□ -1.24
SYNE1-206ENST00000367253 FFAR1O14842 300 aa7.32□□□□□ -1.24
SYNE1-206ENST00000367253 CACNG7P62955 275 aa7.32□□□□□ -1.24
SYNE1-206ENST00000367253 GFI1BQ5VTD9 330 aa7.32□□□□□ -1.24
SYNE1-206ENST00000367253 TRAV21A0A0B4J279 112 aa7.31□□□□□ -1.24
SYNE1-206ENST00000367253 TRAV40A0A0B4J280 105 aa7.31□□□□□ -1.24
SYNE1-206ENST00000367253 C17orf51A8MQB3 221 aa7.31□□□□□ -1.24
SYNE1-206ENST00000367253 CDAP32320 146 aa7.31□□□□□ -1.24
SYNE1-206ENST00000367253 PLPPR1Q8TBJ4 325 aa7.31□□□□□ -1.24
SYNE1-206ENST00000367253 TMEM54Q969K7 222 aa7.31□□□□□ -1.24
SYNE1-206ENST00000367253 NABP2Q9BQ15 211 aa7.31□□□□□ -1.24
SYNE1-206ENST00000367253 IDI2-AS1Q9NZ38 188 aa7.31□□□□□ -1.24
SYNE1-206ENST00000367253 PTPRQQ9UMZ3 2332 aa7.31□□□□□ -1.24
SYNE1-206ENST00000367253 A0A0A6YYD5 115 aa7.31□□□□□ -1.24
SYNE1-206ENST00000367253 EFNB2P52799 333 aa7.31□□□□□ -1.24
SYNE1-206ENST00000367253 ZNF56Q15929 161 aa7.31□□□□□ -1.24
SYNE1-206ENST00000367253 KIAA1644Q3SXP7 199 aa7.31□□□□□ -1.24
SYNE1-206ENST00000367253 TCF23Q7RTU1 214 aa7.31□□□□□ -1.24
SYNE1-206ENST00000367253 C15orf53Q8NAA6 179 aa7.31□□□□□ -1.24
SYNE1-206ENST00000367253 SLC25A38Q96DW6 304 aa7.31□□□□□ -1.24
SYNE1-206ENST00000367253 KCNE5Q9UJ90 142 aa7.31□□□□□ -1.24
SYNE1-206ENST00000367253 RPL32P62910 135 aaKnown RBP7.31□□□□□ -1.24
SYNE1-206ENST00000367253 NHLRC3Q5JS37 347 aa7.31□□□□□ -1.24
SYNE1-206ENST00000367253 PRNTQ86SH4 94 aa7.31□□□□□ -1.24
SYNE1-206ENST00000367253 SPTSSBQ8NFR3 76 aa7.31□□□□□ -1.24
SYNE1-206ENST00000367253 OR5P3Q8WZ94 311 aa7.31□□□□□ -1.24
SYNE1-206ENST00000367253 TCF19Q9Y242 345 aa7.31□□□□□ -1.24
SYNE1-206ENST00000367253 DOCK10Q96BY6 2186 aa7.31□□□□□ -1.24
SYNE1-206ENST00000367253 TRGV4A0A0C4DH28 118 aa7.31□□□□□ -1.24
SYNE1-206ENST00000367253 HIST1H2BKO60814 126 aa7.31□□□□□ -1.24
SYNE1-206ENST00000367253 HIST1H2BJP06899 126 aa7.31□□□□□ -1.24
SYNE1-206ENST00000367253 MALP21145 153 aa7.31□□□□□ -1.24
SYNE1-206ENST00000367253 HIST1H2BOP23527 126 aa7.31□□□□□ -1.24
SYNE1-206ENST00000367253 HIST1H2BBP33778 126 aa7.31□□□□□ -1.24
SYNE1-206ENST00000367253 REG1BP48304 166 aa7.31□□□□□ -1.24
SYNE1-206ENST00000367253 HIST1H2BDP58876 126 aa7.31□□□□□ -1.24
SYNE1-206ENST00000367253 HIST1H2BCP62807 126 aa7.31□□□□□ -1.24
SYNE1-206ENST00000367253 FMODQ06828 376 aa7.31□□□□□ -1.24
SYNE1-206ENST00000367253 HIST2H2BEQ16778 126 aa7.31□□□□□ -1.24
SYNE1-206ENST00000367253 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.31□□□□□ -1.24
SYNE1-206ENST00000367253 UTF1Q5T230 341 aa7.31□□□□□ -1.24
SYNE1-206ENST00000367253 PPP1R27Q86WC6 154 aa7.31□□□□□ -1.24
SYNE1-206ENST00000367253 HIST1H2BHQ93079 126 aa7.31□□□□□ -1.24
SYNE1-206ENST00000367253 ZNF414Q96IQ9 312 aa7.31□□□□□ -1.24
SYNE1-206ENST00000367253 HIST1H2BNQ99877 126 aa7.31□□□□□ -1.24
SYNE1-206ENST00000367253 HIST1H2BMQ99879 126 aa7.31□□□□□ -1.24
SYNE1-206ENST00000367253 TEX48A0A1B0GUV7 120 aa7.31□□□□□ -1.24
SYNE1-206ENST00000367253 OOSP1A8MZH6 123 aa7.31□□□□□ -1.24
SYNE1-206ENST00000367253 F6UB75 175 aa7.31□□□□□ -1.24
SYNE1-206ENST00000367253 NPFFO15130 113 aa7.31□□□□□ -1.24
SYNE1-206ENST00000367253 DPM2O94777 84 aa7.31□□□□□ -1.24
SYNE1-206ENST00000367253 PPP1R17O96001 155 aa7.31□□□□□ -1.24
SYNE1-206ENST00000367253 PPYP01298 95 aa7.31□□□□□ -1.24
SYNE1-206ENST00000367253 LINC00869P0C866 280 aa7.31□□□□□ -1.24
SYNE1-206ENST00000367253 FCGR2BP31994 310 aaPredicted RBP7.31□□□□□ -1.24
SYNE1-206ENST00000367253 GLIPR1P48060 266 aa7.31□□□□□ -1.24
SYNE1-206ENST00000367253 ZP1P60852 638 aa7.31□□□□□ -1.24
SYNE1-206ENST00000367253 FAM53AQ6NSI3 398 aaPredicted RBP7.31□□□□□ -1.24
SYNE1-206ENST00000367253 FAM159AQ6UWV7 190 aa7.31□□□□□ -1.24
SYNE1-206ENST00000367253 LYZL2Q7Z4W2 148 aa7.31□□□□□ -1.24
SYNE1-206ENST00000367253 HIGD1AQ9Y241 93 aa7.31□□□□□ -1.24
SYNE1-206ENST00000367253 IGHV3-43A0A0B4J1X8 118 aa7.3□□□□□ -1.24
SYNE1-206ENST00000367253 K7EN84 100 aa7.3□□□□□ -1.24
SYNE1-206ENST00000367253 KLK8O60259 260 aa7.3□□□□□ -1.24
SYNE1-206ENST00000367253 IGHV3-43DP0DP04 118 aa7.3□□□□□ -1.24
SYNE1-206ENST00000367253 DEFB113Q30KQ7 82 aa7.3□□□□□ -1.24
SYNE1-206ENST00000367253 DMKNQ6E0U4 476 aaPredicted RBP7.3□□□□□ -1.24
SYNE1-206ENST00000367253 WDR82Q6UXN9 313 aa7.3□□□□□ -1.24
SYNE1-206ENST00000367253 HIST3H2BBQ8N257 126 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms