RNA–Protein interactions for RNA: ENST00000367178.7

SCAF8-201, Transcript of SR-related CTD associated factor 8, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SCAF8, Length 5,057 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-201ENST00000367178 ID3Q02535 119 aa13.74□□□□□ -0.21
SCAF8-201ENST00000367178 GPR82Q96P67 336 aa13.74□□□□□ -0.21
SCAF8-201ENST00000367178 PEX7O00628 323 aa13.74□□□□□ -0.21
SCAF8-201ENST00000367178 NUDT3O95989 172 aa13.74□□□□□ -0.21
SCAF8-201ENST00000367178 DMRTA2Q96SC8 542 aa13.74□□□□□ -0.21
SCAF8-201ENST00000367178 PSPNO60542 156 aa13.74□□□□□ -0.21
SCAF8-201ENST00000367178 A6NDN8 102 aa13.73□□□□□ -0.21
SCAF8-201ENST00000367178 H0YIZ8 118 aa13.73□□□□□ -0.21
SCAF8-201ENST00000367178 HLA-DRB1P01911 266 aa13.73□□□□□ -0.21
SCAF8-201ENST00000367178 SRP19P09132 144 aaKnown RBP13.73□□□□□ -0.21
SCAF8-201ENST00000367178 C19orf54Q5BKX5 351 aa13.73□□□□□ -0.21
SCAF8-201ENST00000367178 YAE1D1Q9NRH1 226 aa13.73□□□□□ -0.21
SCAF8-201ENST00000367178 ZNF407Q9C0G0 2248 aa13.73□□□□□ -0.21
SCAF8-201ENST00000367178 A0A0G2JNJ9 132 aa13.73□□□□□ -0.21
SCAF8-201ENST00000367178 TIMM23O14925 209 aa13.73□□□□□ -0.21
SCAF8-201ENST00000367178 ATP5G3P48201 142 aa13.73□□□□□ -0.21
SCAF8-201ENST00000367178 COLCA1Q6ZS62 124 aa13.73□□□□□ -0.21
SCAF8-201ENST00000367178 ZNF418Q8TF45 676 aaPredicted RBP13.73□□□□□ -0.21
SCAF8-201ENST00000367178 Q9UFV3 132 aa13.73□□□□□ -0.21
SCAF8-201ENST00000367178 ZNF324O75467 553 aaPredicted RBP13.73□□□□□ -0.21
SCAF8-201ENST00000367178 BIVMQ86UB2 503 aa13.73□□□□□ -0.21
SCAF8-201ENST00000367178 NPFFR1Q9GZQ6 430 aa13.73□□□□□ -0.21
SCAF8-201ENST00000367178 TRBV9A0A0B4J1U6 114 aa13.72□□□□□ -0.21
SCAF8-201ENST00000367178 SCO2A0A1W2PP80 73 aa13.72□□□□□ -0.21
SCAF8-201ENST00000367178 LDLRAD4O15165 306 aa13.72□□□□□ -0.21
SCAF8-201ENST00000367178 TNFRSF14Q92956 283 aa13.72□□□□□ -0.21
SCAF8-201ENST00000367178 UBE2L6O14933 153 aa13.72□□□□□ -0.21
SCAF8-201ENST00000367178 CLDN16Q9Y5I7 305 aa13.72□□□□□ -0.21
SCAF8-201ENST00000367178 FER1L5A0AVI2 2057 aa13.72□□□□□ -0.21
SCAF8-201ENST00000367178 F8VVB4 439 aa13.72□□□□□ -0.21
SCAF8-201ENST00000367178 F8VWA3 439 aa13.72□□□□□ -0.21
SCAF8-201ENST00000367178 HBBP68871 147 aa13.72□□□□□ -0.21
SCAF8-201ENST00000367178 ZNF56Q15929 161 aa13.72□□□□□ -0.21
SCAF8-201ENST00000367178 UNQ6494/PRO21346Q6UXR6 183 aa13.72□□□□□ -0.21
SCAF8-201ENST00000367178 SCN8AQ9UQD0 1980 aa13.72□□□□□ -0.21
SCAF8-201ENST00000367178 GPR61Q9BZJ8 451 aa13.72□□□□□ -0.21
SCAF8-201ENST00000367178 CD55P08174 381 aa13.71□□□□□ -0.21
SCAF8-201ENST00000367178 CD69Q07108 199 aa13.71□□□□□ -0.21
SCAF8-201ENST00000367178 MIEN1Q9BRT3 115 aa13.71□□□□□ -0.21
SCAF8-201ENST00000367178 FAM181BA6NEQ2 426 aa13.71□□□□□ -0.21
SCAF8-201ENST00000367178 PRCDQ00LT1 54 aa13.71□□□□□ -0.21
SCAF8-201ENST00000367178 SRSF7Q16629 238 aaKnown RBP eCLIP13.71□□□□□ -0.21
SCAF8-201ENST00000367178 LHFPL1Q86WI0 220 aa13.71□□□□□ -0.21
SCAF8-201ENST00000367178 CIDEAO60543 219 aa13.71□□□□□ -0.21
SCAF8-201ENST00000367178 CBLN1P23435 193 aa13.71□□□□□ -0.21
SCAF8-201ENST00000367178 NUTF2P61970 127 aaKnown RBP13.71□□□□□ -0.21
SCAF8-201ENST00000367178 HEPN1Q6WQI6 88 aa13.71□□□□□ -0.21
SCAF8-201ENST00000367178 GRIFINA4D1Z8 144 aa13.71□□□□□ -0.22
SCAF8-201ENST00000367178 OR9G9P0C7N8 305 aa13.71□□□□□ -0.22
SCAF8-201ENST00000367178 LOC105371267A0A1B0GV96 52 aa13.7□□□□□ -0.22
SCAF8-201ENST00000367178 DDTP30046 118 aa13.7□□□□□ -0.22
SCAF8-201ENST00000367178 TMEM42Q69YG0 159 aa13.7□□□□□ -0.22
SCAF8-201ENST00000367178 LRTM2Q8N967 370 aa13.7□□□□□ -0.22
SCAF8-201ENST00000367178 OR10AG1Q8NH19 301 aa13.7□□□□□ -0.22
SCAF8-201ENST00000367178 EFNA4P52798 201 aa13.7□□□□□ -0.22
SCAF8-201ENST00000367178 PMCHL1Q16048 86 aa13.7□□□□□ -0.22
SCAF8-201ENST00000367178 CARHSP1Q9Y2V2 147 aaKnown RBP13.7□□□□□ -0.22
SCAF8-201ENST00000367178 C9JCJ5 164 aa13.7□□□□□ -0.22
SCAF8-201ENST00000367178 OTX1P32242 354 aaPredicted RBP13.7□□□□□ -0.22
SCAF8-201ENST00000367178 KLK15Q9H2R5 256 aa13.7□□□□□ -0.22
SCAF8-201ENST00000367178 MGAMO43451 1857 aa13.7□□□□□ -0.22
SCAF8-201ENST00000367178 TRBV20OR9-2A0A075B6H5 130 aa13.7□□□□□ -0.22
SCAF8-201ENST00000367178 TMEM178BH3BS89 294 aa13.7□□□□□ -0.22
SCAF8-201ENST00000367178 SLC17A3O00476 420 aa13.7□□□□□ -0.22
SCAF8-201ENST00000367178 CEACAM4O75871 244 aa13.7□□□□□ -0.22
SCAF8-201ENST00000367178 HERPUD1Q15011 391 aa13.7□□□□□ -0.22
SCAF8-201ENST00000367178 COL5A1-AS1Q5SY13 56 aa13.7□□□□□ -0.22
SCAF8-201ENST00000367178 FAM166AQ6J272 317 aa13.7□□□□□ -0.22
SCAF8-201ENST00000367178 GNLYP22749 145 aa13.69□□□□□ -0.22
SCAF8-201ENST00000367178 COL25A1Q9BXS0 654 aaPredicted RBP13.69□□□□□ -0.22
SCAF8-201ENST00000367178 TRAV40A0A0B4J280 105 aa13.69□□□□□ -0.22
SCAF8-201ENST00000367178 NAPSAO96009 420 aa13.69□□□□□ -0.22
SCAF8-201ENST00000367178 NUP37Q8NFH4 326 aa13.69□□□□□ -0.22
SCAF8-201ENST00000367178 KIR2DL4Q99706 377 aa13.69□□□□□ -0.22
SCAF8-201ENST00000367178 MSRB2Q9Y3D2 182 aa13.69□□□□□ -0.22
SCAF8-201ENST00000367178 PHF3Q92576 2039 aaKnown RBP13.69□□□□□ -0.22
SCAF8-201ENST00000367178 OR4D5Q8NGN0 318 aa13.69□□□□□ -0.22
SCAF8-201ENST00000367178 LILRA1O75019 489 aa13.69□□□□□ -0.22
SCAF8-201ENST00000367178 FOXA3P55318 350 aaPredicted RBP13.69□□□□□ -0.22
SCAF8-201ENST00000367178 PRSS22Q9GZN4 317 aa13.69□□□□□ -0.22
SCAF8-201ENST00000367178 Q9H3A6 140 aa13.69□□□□□ -0.22
SCAF8-201ENST00000367178 M0R381 172 aa13.68□□□□□ -0.22
SCAF8-201ENST00000367178 PVRIGQ6DKI7 326 aa13.68□□□□□ -0.22
SCAF8-201ENST00000367178 CD177Q8N6Q3 437 aa13.68□□□□□ -0.22
SCAF8-201ENST00000367178 RHOGP84095 191 aa13.68□□□□□ -0.22
SCAF8-201ENST00000367178 LY6G6EA0A0G2JKS1 128 aa13.68□□□□□ -0.22
SCAF8-201ENST00000367178 FAM90A9PA6NNJ1 464 aa13.68□□□□□ -0.22
SCAF8-201ENST00000367178 PCP4P48539 62 aa13.68□□□□□ -0.22
SCAF8-201ENST00000367178 ZNF474Q6S9Z5 364 aaPredicted RBP13.68□□□□□ -0.22
SCAF8-201ENST00000367178 RNF125Q96EQ8 232 aa13.68□□□□□ -0.22
SCAF8-201ENST00000367178 U3KQA8 63 aa13.68□□□□□ -0.22
SCAF8-201ENST00000367178 DOCK7Q96N67 2140 aa13.68□□□□□ -0.22
SCAF8-201ENST00000367178 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.68□□□□□ -0.227e-7■■■■□ 21.2
SCAF8-201ENST00000367178 IL36BQ9NZH7 164 aa13.68□□□□□ -0.22
SCAF8-201ENST00000367178 KIAA2026Q5HYC2 2103 aa13.68□□□□□ -0.22
SCAF8-201ENST00000367178 IGHV2-26A0A0B4J1V2 119 aa13.67□□□□□ -0.22
SCAF8-201ENST00000367178 A8MXK9 166 aa13.67□□□□□ -0.22
SCAF8-201ENST00000367178 FOLR2P14207 255 aa13.67□□□□□ -0.22
SCAF8-201ENST00000367178 RNF144BQ7Z419 303 aa13.67□□□□□ -0.22
SCAF8-201ENST00000367178 METRNQ9UJH8 293 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms