RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 SAPCD1Q5SSQ6 148 aa11.57□□□□□ -0.56
COL6A1-201ENST00000361866 SRSF12Q8WXF0 261 aaKnown RBP11.57□□□□□ -0.56
COL6A1-201ENST00000361866 AGMATQ9BSE5 352 aa11.57□□□□□ -0.56
COL6A1-201ENST00000361866 ELOVL5Q9NYP7 299 aa11.57□□□□□ -0.56
COL6A1-201ENST00000361866 GNG5P63218 68 aa11.57□□□□□ -0.56
COL6A1-201ENST00000361866 GFRALQ6UXV0 394 aa11.57□□□□□ -0.56
COL6A1-201ENST00000361866 LINC00305Q7Z4B0 112 aa11.57□□□□□ -0.56
COL6A1-201ENST00000361866 IGHV3-35A0A0C4DH35 117 aa11.57□□□□□ -0.56
COL6A1-201ENST00000361866 PPIHO43447 177 aaKnown RBP11.57□□□□□ -0.56
COL6A1-201ENST00000361866 RPL27AP46776 148 aaKnown RBP11.57□□□□□ -0.56
COL6A1-201ENST00000361866 RIGQ13278 110 aa11.57□□□□□ -0.56
COL6A1-201ENST00000361866 ACTL10Q5JWF8 245 aa11.57□□□□□ -0.56
COL6A1-201ENST00000361866 HSPB8Q9UJY1 196 aa11.57□□□□□ -0.56
COL6A1-201ENST00000361866 HIGD1CA8MV81 97 aa11.56□□□□□ -0.56
COL6A1-201ENST00000361866 DLL1O00548 723 aa11.56□□□□□ -0.56
COL6A1-201ENST00000361866 IL18BPO95998 194 aa11.56□□□□□ -0.56
COL6A1-201ENST00000361866 ACP1P24666 158 aa11.56□□□□□ -0.56
COL6A1-201ENST00000361866 TCF24Q7RTU0 167 aa11.56□□□□□ -0.56
COL6A1-201ENST00000361866 HAPLN4Q86UW8 402 aa11.56□□□□□ -0.56
COL6A1-201ENST00000361866 ZNF714Q96N38 554 aa11.56□□□□□ -0.56
COL6A1-201ENST00000361866 CLEC5AQ9NY25 188 aa11.56□□□□□ -0.56
COL6A1-201ENST00000361866 PCNX2A6NKB5 2137 aa11.56□□□□□ -0.56
COL6A1-201ENST00000361866 TRAV5A0A0B4J249 113 aa11.56□□□□□ -0.56
COL6A1-201ENST00000361866 MORN2Q502X0 79 aa11.56□□□□□ -0.56
COL6A1-201ENST00000361866 C19orf35Q6ZS72 473 aa11.56□□□□□ -0.56
COL6A1-201ENST00000361866 GOLT1AQ6ZVE7 132 aa11.56□□□□□ -0.56
COL6A1-201ENST00000361866 MALRD1Q5VYJ5 2156 aa11.56□□□□□ -0.56
COL6A1-201ENST00000361866 OR4C46A6NHA9 309 aa11.56□□□□□ -0.56
COL6A1-201ENST00000361866 FOXI3A8MTJ6 420 aaPredicted RBP11.56□□□□□ -0.56
COL6A1-201ENST00000361866 STAG3L2P0CL84 134 aa11.56□□□□□ -0.56
COL6A1-201ENST00000361866 STAG3L3P0CL85 134 aa11.56□□□□□ -0.56
COL6A1-201ENST00000361866 GFRA1P56159 465 aa11.56□□□□□ -0.56
COL6A1-201ENST00000361866 ZNF146Q15072 292 aa11.56□□□□□ -0.56
COL6A1-201ENST00000361866 FOXL2NBQ6ZUU3 175 aa11.56□□□□□ -0.56
COL6A1-201ENST00000361866 IDI2-AS1Q9NZ38 188 aa11.56□□□□□ -0.56
COL6A1-201ENST00000361866 TRBV9A0A0B4J1U6 114 aa11.56□□□□□ -0.56
COL6A1-201ENST00000361866 ETV2O00321 342 aaPredicted RBP11.56□□□□□ -0.56
COL6A1-201ENST00000361866 BTF3P20290 206 aaKnown RBP11.56□□□□□ -0.56
COL6A1-201ENST00000361866 PLA2G5P39877 138 aa11.56□□□□□ -0.56
COL6A1-201ENST00000361866 GCSAMQ8N6F7 178 aa11.56□□□□□ -0.56
COL6A1-201ENST00000361866 BEND2Q8NDZ0 799 aa11.56□□□□□ -0.56
COL6A1-201ENST00000361866 FDCSPQ8NFU4 85 aa11.56□□□□□ -0.56
COL6A1-201ENST00000361866 TMEM208Q9BTX3 173 aa11.56□□□□□ -0.56
COL6A1-201ENST00000361866 TMEM70Q9BUB7 260 aa11.56□□□□□ -0.56
COL6A1-201ENST00000361866 UFC1Q9Y3C8 167 aa11.56□□□□□ -0.56
COL6A1-201ENST00000361866 S4R3C0 116 aa11.56□□□□□ -0.56
COL6A1-201ENST00000361866 Q6P435 159 aa11.55□□□□□ -0.56
COL6A1-201ENST00000361866 OR10W1Q8NGF6 305 aa11.55□□□□□ -0.56
COL6A1-201ENST00000361866 LOXL4Q96JB6 756 aa11.55□□□□□ -0.56
COL6A1-201ENST00000361866 PROK2Q9HC23 129 aa11.55□□□□□ -0.56
COL6A1-201ENST00000361866 PPIAL4EA0A075B759 164 aa11.55□□□□□ -0.56
COL6A1-201ENST00000361866 SAA2-SAA4A0A096LPE2 208 aa11.55□□□□□ -0.56
COL6A1-201ENST00000361866 GAGE10A6NGK3 116 aa11.55□□□□□ -0.56
COL6A1-201ENST00000361866 PRR33A8MZF0 331 aa11.55□□□□□ -0.56
COL6A1-201ENST00000361866 PPIAL4DF5H284 164 aa11.55□□□□□ -0.56
COL6A1-201ENST00000361866 ZNF324O75467 553 aaPredicted RBP11.55□□□□□ -0.56
COL6A1-201ENST00000361866 SAA2P0DJI9 122 aaPredicted RBP11.55□□□□□ -0.56
COL6A1-201ENST00000361866 PPIAL4FP0DN26 164 aa11.55□□□□□ -0.56
COL6A1-201ENST00000361866 SELENOTP62341 195 aa11.55□□□□□ -0.56
COL6A1-201ENST00000361866 ALKBH7Q9BT30 221 aaPredicted RBP11.55□□□□□ -0.56
COL6A1-201ENST00000361866 ZNF503-AS2A6NEH8 195 aa11.55□□□□□ -0.56
COL6A1-201ENST00000361866 C15orf62A8K5M9 175 aa11.55□□□□□ -0.56
COL6A1-201ENST00000361866 TNFSF13O75888 250 aa11.55□□□□□ -0.56
COL6A1-201ENST00000361866 FOXL1Q12952 345 aa11.55□□□□□ -0.56
COL6A1-201ENST00000361866 TBR1Q16650 682 aa11.55□□□□□ -0.56
COL6A1-201ENST00000361866 MLANAQ16655 118 aa11.55□□□□□ -0.56
COL6A1-201ENST00000361866 UNQ5815/PRO19632Q6UWF5 114 aa11.55□□□□□ -0.56
COL6A1-201ENST00000361866 ZNF114Q8NC26 417 aa11.55□□□□□ -0.56
COL6A1-201ENST00000361866 MGST2Q99735 147 aa11.55□□□□□ -0.56
COL6A1-201ENST00000361866 IFI27L2Q9H2X8 130 aa11.55□□□□□ -0.56
COL6A1-201ENST00000361866 HIGD1AQ9Y241 93 aa11.55□□□□□ -0.56
COL6A1-201ENST00000361866 POLR3KQ9Y2Y1 108 aaPredicted RBP11.55□□□□□ -0.56
COL6A1-201ENST00000361866 IQCF6A8MYZ5 107 aa11.54□□□□□ -0.56
COL6A1-201ENST00000361866 S100A4P26447 101 aaKnown RBP11.54□□□□□ -0.56
COL6A1-201ENST00000361866 PRSS8Q16651 343 aa11.54□□□□□ -0.56
COL6A1-201ENST00000361866 MAJINQ3KP22 176 aa11.54□□□□□ -0.56
COL6A1-201ENST00000361866 NBEAP1P0C6P0 100 aa11.54□□□□□ -0.56
COL6A1-201ENST00000361866 CDKN1AP38936 164 aa11.54□□□□□ -0.56
COL6A1-201ENST00000361866 TIMD4Q96H15 378 aa11.54□□□□□ -0.56
COL6A1-201ENST00000361866 C9orf172C9J069 976 aa11.54□□□□□ -0.56
COL6A1-201ENST00000361866 F11RQ9Y624 299 aaKnown RBP11.54□□□□□ -0.56
COL6A1-201ENST00000361866 ZNF106Q9H2Y7 1883 aaKnown RBP11.54□□□□□ -0.56
COL6A1-201ENST00000361866 IGKV3-7A0A075B6H7 116 aa11.53□□□□□ -0.56
COL6A1-201ENST00000361866 IGKV3D-15A0A087WSY6 115 aa11.53□□□□□ -0.56
COL6A1-201ENST00000361866 CCL3L1P16619 93 aa11.53□□□□□ -0.56
COL6A1-201ENST00000361866 PRRX1P54821 245 aa11.53□□□□□ -0.56
COL6A1-201ENST00000361866 C10orf55Q5SWW7 151 aa11.53□□□□□ -0.56
COL6A1-201ENST00000361866 LINC00479Q96M42 142 aa11.53□□□□□ -0.56
COL6A1-201ENST00000361866 PEX7O00628 323 aa11.53□□□□□ -0.56
COL6A1-201ENST00000361866 ZFP36L1Q07352 338 aaKnown RBP11.53□□□□□ -0.56
COL6A1-201ENST00000361866 ASPHD1Q5U4P2 390 aa11.53□□□□□ -0.56
COL6A1-201ENST00000361866 C12orf54Q6X4T0 127 aa11.53□□□□□ -0.56
COL6A1-201ENST00000361866 TMEM144Q7Z5S9 345 aa11.53□□□□□ -0.56
COL6A1-201ENST00000361866 DMRTC2Q8IXT2 367 aaPredicted RBP11.53□□□□□ -0.56
COL6A1-201ENST00000361866 HILPDAQ9Y5L2 63 aa11.53□□□□□ -0.56
COL6A1-201ENST00000361866 IGLV3-1P01715 115 aa11.53□□□□□ -0.56
COL6A1-201ENST00000361866 COQ2Q96H96 371 aa11.53□□□□□ -0.56
COL6A1-201ENST00000361866 SFXN3Q9BWM7 321 aa11.53□□□□□ -0.56
COL6A1-201ENST00000361866 KIF26AQ9ULI4 1882 aaPredicted RBP11.53□□□□□ -0.56
COL6A1-201ENST00000361866 IGHV2OR16-5A0A0B4J2B6 119 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms