RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 ZNF418Q8TF45 676 aaPredicted RBP11.64□□□□□ -0.55
SMC5-201ENST00000361138 Q5PR19 223 aa11.64□□□□□ -0.55
SMC5-201ENST00000361138 PMS2CLQ68D20 193 aa11.64□□□□□ -0.55
SMC5-201ENST00000361138 C5orf24Q7Z6I8 188 aa11.64□□□□□ -0.55
SMC5-201ENST00000361138 ORMDL3Q8N138 153 aa11.64□□□□□ -0.55
SMC5-201ENST00000361138 ZIC4Q8N9L1 334 aa11.64□□□□□ -0.55
SMC5-201ENST00000361138 LOXL4Q96JB6 756 aa11.64□□□□□ -0.55
SMC5-201ENST00000361138 YPEL1O60688 119 aa11.64□□□□□ -0.55
SMC5-201ENST00000361138 CD33P20138 364 aa11.64□□□□□ -0.55
SMC5-201ENST00000361138 TIMM23BQ5SRD1 257 aa11.64□□□□□ -0.55
SMC5-201ENST00000361138 C1orf185Q5T7R7 199 aa11.64□□□□□ -0.55
SMC5-201ENST00000361138 Q6ZS49 121 aa11.64□□□□□ -0.55
SMC5-201ENST00000361138 YPEL2Q96QA6 119 aa11.64□□□□□ -0.55
SMC5-201ENST00000361138 MRPS18CQ9Y3D5 142 aaKnown RBP11.64□□□□□ -0.55
SMC5-201ENST00000361138 SAA2-SAA4A0A096LPE2 208 aa11.63□□□□□ -0.55
SMC5-201ENST00000361138 KBTBD11-OT1A0A1B0GTJ5 212 aa11.63□□□□□ -0.55
SMC5-201ENST00000361138 CGB1A6NKQ9 187 aa11.63□□□□□ -0.55
SMC5-201ENST00000361138 UPK2O00526 184 aa11.63□□□□□ -0.55
SMC5-201ENST00000361138 IGLV3-19P01714 112 aa11.63□□□□□ -0.55
SMC5-201ENST00000361138 SAA2P0DJI9 122 aaPredicted RBP11.63□□□□□ -0.55
SMC5-201ENST00000361138 KHDC1LQ5JSQ8 128 aa11.63□□□□□ -0.55
SMC5-201ENST00000361138 DNASE2BQ8WZ79 361 aa11.63□□□□□ -0.55
SMC5-201ENST00000361138 IGHV1-69-2A0A0G2JMI3 117 aa11.63□□□□□ -0.55
SMC5-201ENST00000361138 A0A0G2JRQ6 117 aa11.63□□□□□ -0.55
SMC5-201ENST00000361138 OR11H12B2RN74 326 aa11.63□□□□□ -0.55
SMC5-201ENST00000361138 COX6CP09669 75 aa11.63□□□□□ -0.55
SMC5-201ENST00000361138 PPP1R32Q7Z5V6 425 aa11.63□□□□□ -0.55
SMC5-201ENST00000361138 OR11H1Q8NG94 326 aa11.63□□□□□ -0.55
SMC5-201ENST00000361138 OR11H2Q8NH07 326 aa11.63□□□□□ -0.55
SMC5-201ENST00000361138 OTORQ9NRC9 128 aa11.63□□□□□ -0.55
SMC5-201ENST00000361138 COX11Q9Y6N1 276 aa11.63□□□□□ -0.55
SMC5-201ENST00000361138 NPSP0C0P6 89 aa11.63□□□□□ -0.55
SMC5-201ENST00000361138 AREGP15514 252 aa11.63□□□□□ -0.55
SMC5-201ENST00000361138 KLK15Q9H2R5 256 aa11.63□□□□□ -0.55
SMC5-201ENST00000361138 VWA8A3KMH1 1905 aa11.63□□□□□ -0.55
SMC5-201ENST00000361138 LILRA1O75019 489 aa11.63□□□□□ -0.55
SMC5-201ENST00000361138 PYYP10082 97 aa11.63□□□□□ -0.55
SMC5-201ENST00000361138 PSG7Q13046 419 aa11.63□□□□□ -0.55
SMC5-201ENST00000361138 GAGE1Q13065 139 aa11.63□□□□□ -0.55
SMC5-201ENST00000361138 MORN2Q502X0 79 aa11.63□□□□□ -0.55
SMC5-201ENST00000361138 WFDC3Q8IUB2 231 aa11.63□□□□□ -0.55
SMC5-201ENST00000361138 OR9G1Q8NH87 305 aa11.63□□□□□ -0.55
SMC5-201ENST00000361138 PTPRDP23468 1912 aa11.62□□□□□ -0.55
SMC5-201ENST00000361138 C16orf97H3BN30 126 aa11.62□□□□□ -0.55
SMC5-201ENST00000361138 DUTP33316 252 aaKnown RBP11.62□□□□□ -0.55
SMC5-201ENST00000361138 DLX6P56179 175 aa11.62□□□□□ -0.55
SMC5-201ENST00000361138 LYPD6BQ8NI32 183 aa11.62□□□□□ -0.55
SMC5-201ENST00000361138 TM4SF5O14894 197 aa11.62□□□□□ -0.55
SMC5-201ENST00000361138 ATP5LO75964 103 aa11.62□□□□□ -0.55
SMC5-201ENST00000361138 HSD52Q0P140 79 aa11.62□□□□□ -0.55
SMC5-201ENST00000361138 TMEM42Q69YG0 159 aa11.62□□□□□ -0.55
SMC5-201ENST00000361138 CCDC144NLQ6NUI1 221 aa11.62□□□□□ -0.55
SMC5-201ENST00000361138 C16orf92Q96LL3 132 aa11.62□□□□□ -0.55
SMC5-201ENST00000361138 TP53BP1Q12888 1972 aaPredicted RBP11.62□□□□□ -0.55
SMC5-201ENST00000361138 CDPF1Q6NVV7 123 aa11.62□□□□□ -0.55
SMC5-201ENST00000361138 OR10J6PQ8NGY7 276 aa11.62□□□□□ -0.55
SMC5-201ENST00000361138 MRPL27Q9P0M9 148 aaKnown RBP11.62□□□□□ -0.55
SMC5-201ENST00000361138 FAM90A27PA6NNH2 459 aa11.62□□□□□ -0.55
SMC5-201ENST00000361138 F2RL2O00254 374 aa11.62□□□□□ -0.55
SMC5-201ENST00000361138 FAM90A1Q86YD7 464 aa11.62□□□□□ -0.55
SMC5-201ENST00000361138 MRPS16Q9Y3D3 137 aaKnown RBP11.62□□□□□ -0.55
SMC5-201ENST00000361138 CELA3BP08861 270 aa11.61□□□□□ -0.55
SMC5-201ENST00000361138 LCN12Q6JVE5 192 aa11.61□□□□□ -0.55
SMC5-201ENST00000361138 WDR82Q6UXN9 313 aa11.61□□□□□ -0.55
SMC5-201ENST00000361138 Q6ZT83 130 aa11.61□□□□□ -0.55
SMC5-201ENST00000361138 IMMP1LQ96LU5 166 aa11.61□□□□□ -0.55
SMC5-201ENST00000361138 LEPP41159 167 aa11.61□□□□□ -0.55
SMC5-201ENST00000361138 Q0VG73 95 aa11.61□□□□□ -0.55
SMC5-201ENST00000361138 CIARTQ8N365 385 aaPredicted RBP11.61□□□□□ -0.55
SMC5-201ENST00000361138 METTL26Q96S19 204 aa11.61□□□□□ -0.55
SMC5-201ENST00000361138 TRBV6-6A0A0A6YYG2 114 aa11.61□□□□□ -0.55
SMC5-201ENST00000361138 AHRRA9YTQ3 701 aa11.61□□□□□ -0.55
SMC5-201ENST00000361138 SAA1P0DJI8 122 aaPredicted RBP11.61□□□□□ -0.55
SMC5-201ENST00000361138 TRIP6Q15654 476 aaKnown RBP11.61□□□□□ -0.55
SMC5-201ENST00000361138 OR2K2Q8NGT1 345 aa11.61□□□□□ -0.55
SMC5-201ENST00000361138 PSG1P11464 419 aa11.61□□□□□ -0.55
SMC5-201ENST00000361138 SEPSECSQ9HD40 501 aaKnown RBP11.61□□□□□ -0.55
SMC5-201ENST00000361138 A0A1B0GUS0 222 aa11.61□□□□□ -0.55
SMC5-201ENST00000361138 FAM53AQ6NSI3 398 aaPredicted RBP11.61□□□□□ -0.55
SMC5-201ENST00000361138 MRPL20Q9BYC9 149 aaKnown RBP11.61□□□□□ -0.55
SMC5-201ENST00000361138 MUC21A0A0G2JKD1 596 aa11.6□□□□□ -0.55
SMC5-201ENST00000361138 MUC21A0A140T8X8 626 aa11.6□□□□□ -0.55
SMC5-201ENST00000361138 hDV102S1A0JD36 115 aa11.6□□□□□ -0.55
SMC5-201ENST00000361138 E9PLN8 166 aa11.6□□□□□ -0.55
SMC5-201ENST00000361138 MUC21Q5SSG8 566 aa11.6□□□□□ -0.55
SMC5-201ENST00000361138 DGAT2L7PQ6IED9 249 aa11.6□□□□□ -0.55
SMC5-201ENST00000361138 MRPL14Q6P1L8 145 aaKnown RBP11.6□□□□□ -0.55
SMC5-201ENST00000361138 ASCL4Q6XD76 172 aa11.6□□□□□ -0.55
SMC5-201ENST00000361138 VCX2Q9H322 139 aa11.6□□□□□ -0.55
SMC5-201ENST00000361138 A0A1W2PS18 150 aa11.6□□□□□ -0.55
SMC5-201ENST00000361138 MPV17L2Q567V2 206 aa11.6□□□□□ -0.55
SMC5-201ENST00000361138 GP6Q9HCN6 339 aa11.6□□□□□ -0.55
SMC5-201ENST00000361138 HBDP02042 147 aa11.6□□□□□ -0.55
SMC5-201ENST00000361138 TFF1P04155 84 aa11.6□□□□□ -0.55
SMC5-201ENST00000361138 SAMD5Q5TGI4 173 aa11.6□□□□□ -0.55
SMC5-201ENST00000361138 TCRBV4S1A1TA0A5B7 111 aa11.6□□□□□ -0.55
SMC5-201ENST00000361138 PRCDQ00LT1 54 aa11.6□□□□□ -0.55
SMC5-201ENST00000361138 NHP2Q9NX24 153 aaKnown RBP11.6□□□□□ -0.55
SMC5-201ENST00000361138 PHLDA3Q9Y5J5 127 aa11.6□□□□□ -0.55
SMC5-201ENST00000361138 IGKV3-7A0A075B6H7 116 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms