RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 POU2AF1Q16633 256 aa5.93□□□□□ -1.46
CLCN3-202ENST00000360642 GFI1BQ5VTD9 330 aa5.93□□□□□ -1.46
CLCN3-202ENST00000360642 TGIF2LYQ8IUE0 185 aa5.93□□□□□ -1.46
CLCN3-202ENST00000360642 OR10A7Q8NGE5 316 aa5.93□□□□□ -1.46
CLCN3-202ENST00000360642 IGFBPL1Q8WX77 278 aa5.93□□□□□ -1.46
CLCN3-202ENST00000360642 TCF19Q9Y242 345 aa5.93□□□□□ -1.46
CLCN3-202ENST00000360642 FOXA2Q9Y261 457 aaPredicted RBP5.93□□□□□ -1.46
CLCN3-202ENST00000360642 TET2Q6N021 2002 aaPredicted RBP5.93□□□□□ -1.46
CLCN3-202ENST00000360642 FAM27E3Q08E93 113 aa5.93□□□□□ -1.46
CLCN3-202ENST00000360642 ZNF788Q6ZQV5 615 aa5.93□□□□□ -1.46
CLCN3-202ENST00000360642 ZNF383Q8NA42 475 aa5.93□□□□□ -1.46
CLCN3-202ENST00000360642 GGTLC1Q9BX51 225 aa5.93□□□□□ -1.46
CLCN3-202ENST00000360642 PTPRZ1P23471 2315 aaPredicted RBP5.93□□□□□ -1.46
CLCN3-202ENST00000360642 PDE6DO43924 150 aa5.93□□□□□ -1.46
CLCN3-202ENST00000360642 GYPAP02724 150 aa5.93□□□□□ -1.46
CLCN3-202ENST00000360642 STAG3L2P0CL84 134 aa5.93□□□□□ -1.46
CLCN3-202ENST00000360642 STAG3L3P0CL85 134 aa5.93□□□□□ -1.46
CLCN3-202ENST00000360642 BMP5P22003 454 aa5.93□□□□□ -1.46
CLCN3-202ENST00000360642 THBS3P49746 956 aa5.93□□□□□ -1.46
CLCN3-202ENST00000360642 TNFAIP6P98066 277 aaPredicted RBP5.93□□□□□ -1.46
CLCN3-202ENST00000360642 TEX36Q5VZQ5 186 aa5.93□□□□□ -1.46
CLCN3-202ENST00000360642 OR4A47Q6IF82 309 aa5.93□□□□□ -1.46
CLCN3-202ENST00000360642 NUP37Q8NFH4 326 aa5.93□□□□□ -1.46
CLCN3-202ENST00000360642 OR4X1Q8NH49 305 aa5.93□□□□□ -1.46
CLCN3-202ENST00000360642 DAZAP1Q96EP5 407 aaKnown RBP5.93□□□□□ -1.46
CLCN3-202ENST00000360642 SVEP1Q4LDE5 3571 aa5.93□□□□□ -1.46
CLCN3-202ENST00000360642 TRGV10A0A0A0MS01 117 aa5.92□□□□□ -1.46
CLCN3-202ENST00000360642 PPP1R2P9O14990 202 aa5.92□□□□□ -1.46
CLCN3-202ENST00000360642 CRYABP02511 175 aaKnown RBP5.92□□□□□ -1.46
CLCN3-202ENST00000360642 GALR1P47211 349 aa5.92□□□□□ -1.46
CLCN3-202ENST00000360642 HSPE1P61604 102 aaKnown RBP5.92□□□□□ -1.46
CLCN3-202ENST00000360642 GNB1P62873 340 aa5.92□□□□□ -1.46
CLCN3-202ENST00000360642 FAM57AQ8TBR7 257 aa5.92□□□□□ -1.46
CLCN3-202ENST00000360642 GPR61Q9BZJ8 451 aa5.92□□□□□ -1.46
CLCN3-202ENST00000360642 PATZ1Q9HBE1 687 aaKnown RBP5.92□□□□□ -1.46
CLCN3-202ENST00000360642 NPVFQ9HCQ7 196 aa5.92□□□□□ -1.46
CLCN3-202ENST00000360642 KCNIP2Q9NS61 270 aa5.92□□□□□ -1.46
CLCN3-202ENST00000360642 IDI2-AS1Q9NZ38 188 aa5.92□□□□□ -1.46
CLCN3-202ENST00000360642 PXMP4Q9Y6I8 212 aa5.92□□□□□ -1.46
CLCN3-202ENST00000360642 PCNX1Q96RV3 2341 aa5.92□□□□□ -1.46
CLCN3-202ENST00000360642 ZNF318Q5VUA4 2279 aa5.92□□□□□ -1.46
CLCN3-202ENST00000360642 A0A1W2PPV4 95 aa5.92□□□□□ -1.46
CLCN3-202ENST00000360642 ZNF729A6NN14 1252 aaPredicted RBP5.92□□□□□ -1.46
CLCN3-202ENST00000360642 H7BYZ3 331 aa5.92□□□□□ -1.46
CLCN3-202ENST00000360642 HRASP01112 189 aa5.92□□□□□ -1.46
CLCN3-202ENST00000360642 S100A2P29034 98 aa5.92□□□□□ -1.46
CLCN3-202ENST00000360642 CCKARP32238 428 aa5.92□□□□□ -1.46
CLCN3-202ENST00000360642 MRPS11P82912 194 aaKnown RBP5.92□□□□□ -1.46
CLCN3-202ENST00000360642 RBPJQ06330 500 aa5.92□□□□□ -1.46
CLCN3-202ENST00000360642 PAPPA-AS1Q5QFB9 102 aa5.92□□□□□ -1.46
CLCN3-202ENST00000360642 ADTRPQ96IZ2 230 aa5.92□□□□□ -1.46
CLCN3-202ENST00000360642 TXNDC17Q9BRA2 123 aa5.92□□□□□ -1.46
CLCN3-202ENST00000360642 POLEQ07864 2286 aa5.92□□□□□ -1.46
CLCN3-202ENST00000360642 GGCTO75223 188 aaKnown RBP5.91□□□□□ -1.46
CLCN3-202ENST00000360642 MMP23AO75900 390 aa5.91□□□□□ -1.46
CLCN3-202ENST00000360642 ATP5G3P48201 142 aa5.91□□□□□ -1.46
CLCN3-202ENST00000360642 SELENOVP59797 346 aa5.91□□□□□ -1.46
CLCN3-202ENST00000360642 TMEM30BQ3MIR4 351 aa5.91□□□□□ -1.46
CLCN3-202ENST00000360642 ODF3L2Q3SX64 289 aa5.91□□□□□ -1.46
CLCN3-202ENST00000360642 MIC13Q5XKP0 118 aa5.91□□□□□ -1.46
CLCN3-202ENST00000360642 SLC25A48Q6ZT89 311 aaKnown RBP5.91□□□□□ -1.46
CLCN3-202ENST00000360642 LINC01551Q86U37 167 aa5.91□□□□□ -1.46
CLCN3-202ENST00000360642 NECAP1Q8NC96 275 aa5.91□□□□□ -1.46
CLCN3-202ENST00000360642 CCL13Q99616 98 aa5.91□□□□□ -1.46
CLCN3-202ENST00000360642 PITPNC1Q9UKF7 332 aa5.91□□□□□ -1.46
CLCN3-202ENST00000360642 RAI1Q7Z5J4 1906 aaPredicted RBP5.91□□□□□ -1.46
CLCN3-202ENST00000360642 TANC2Q9HCD6 1990 aa5.91□□□□□ -1.46
CLCN3-202ENST00000360642 FNDC10F2Z333 226 aa5.91□□□□□ -1.46
CLCN3-202ENST00000360642 F6UZH7 168 aa5.91□□□□□ -1.46
CLCN3-202ENST00000360642 CXorf1O96002 111 aa5.91□□□□□ -1.46
CLCN3-202ENST00000360642 TYMSP04818 313 aa5.91□□□□□ -1.46
CLCN3-202ENST00000360642 ARL14EPLP0DKL9 152 aa5.91□□□□□ -1.46
CLCN3-202ENST00000360642 CT45A6P0DMU7 189 aa5.91□□□□□ -1.46
CLCN3-202ENST00000360642 CT45A5P0DMU8 189 aa5.91□□□□□ -1.46
CLCN3-202ENST00000360642 CT45A7P0DMV0 189 aa5.91□□□□□ -1.46
CLCN3-202ENST00000360642 CD99P14209 185 aa5.91□□□□□ -1.46
CLCN3-202ENST00000360642 SRP14P37108 136 aaKnown RBP5.91□□□□□ -1.46
CLCN3-202ENST00000360642 MAJINQ3KP22 176 aa5.91□□□□□ -1.46
CLCN3-202ENST00000360642 LYG1Q8N1E2 194 aa5.91□□□□□ -1.46
CLCN3-202ENST00000360642 FAM216BQ8N7L0 139 aa5.91□□□□□ -1.46
CLCN3-202ENST00000360642 SLC24A4Q8NFF2 622 aa5.91□□□□□ -1.46
CLCN3-202ENST00000360642 OR10D4PQ8NGN7 298 aa5.91□□□□□ -1.46
CLCN3-202ENST00000360642 RPUSD1Q9UJJ7 312 aaKnown RBP5.91□□□□□ -1.46
CLCN3-202ENST00000360642 DMRT1Q9Y5R6 373 aa5.91□□□□□ -1.46
CLCN3-202ENST00000360642 M0QZ24 198 aa5.91□□□□□ -1.46
CLCN3-202ENST00000360642 NDUFB4O95168 129 aa5.91□□□□□ -1.46
CLCN3-202ENST00000360642 CA2P00918 260 aa5.91□□□□□ -1.46
CLCN3-202ENST00000360642 NPY1RP25929 384 aa5.91□□□□□ -1.46
CLCN3-202ENST00000360642 COA6Q5JTJ3 125 aaKnown RBP5.91□□□□□ -1.46
CLCN3-202ENST00000360642 DNLZQ5SXM8 178 aa5.91□□□□□ -1.46
CLCN3-202ENST00000360642 DEFB108BQ8NET1 73 aa5.91□□□□□ -1.46
CLCN3-202ENST00000360642 NEUROG1Q92886 237 aa5.91□□□□□ -1.46
CLCN3-202ENST00000360642 OR5B12Q96R08 314 aa5.91□□□□□ -1.46
CLCN3-202ENST00000360642 DERL1Q9BUN8 251 aa5.91□□□□□ -1.46
CLCN3-202ENST00000360642 DCAF16Q9NXF7 216 aa5.91□□□□□ -1.46
CLCN3-202ENST00000360642 ZNF257Q9Y2Q1 563 aa5.91□□□□□ -1.46
CLCN3-202ENST00000360642 MYOD1P15172 320 aa5.9□□□□□ -1.46
CLCN3-202ENST00000360642 RPL29P47914 159 aaKnown RBP5.9□□□□□ -1.46
CLCN3-202ENST00000360642 UBE2G2P60604 165 aa5.9□□□□□ -1.46
CLCN3-202ENST00000360642 EFNB3Q15768 340 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms