RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 DPRXA6NFQ7 191 aa8.2□□□□□ -1.1
CUX1-203ENST00000360264 ZNF708P17019 499 aa8.2□□□□□ -1.1
CUX1-203ENST00000360264 PCOLCEQ15113 449 aa8.2□□□□□ -1.1
CUX1-203ENST00000360264 BIVMQ86UB2 503 aa8.2□□□□□ -1.1
CUX1-203ENST00000360264 MBD3L1Q8WWY6 194 aa8.2□□□□□ -1.1
CUX1-203ENST00000360264 FBXL7Q9UJT9 491 aa8.2□□□□□ -1.1
CUX1-203ENST00000360264 TSC2P49815 1807 aa8.2□□□□□ -1.1
CUX1-203ENST00000360264 LOC101059948A0A1B0GTJ6 334 aa8.2□□□□□ -1.1
CUX1-203ENST00000360264 PPP1R3EQ9H7J1 279 aa8.2□□□□□ -1.1
CUX1-203ENST00000360264 MOSPD3O75425 235 aa8.2□□□□□ -1.1
CUX1-203ENST00000360264 BEX4Q9NWD9 120 aaPredicted RBP8.2□□□□□ -1.1
CUX1-203ENST00000360264 IGLV3-21P80748 117 aaPredicted RBP8.2□□□□□ -1.1
CUX1-203ENST00000360264 DRAM1Q8N682 238 aa8.2□□□□□ -1.1
CUX1-203ENST00000360264 CENPVL1A0A0U1RR11 272 aa8.2□□□□□ -1.1
CUX1-203ENST00000360264 HIGD1CA8MV81 97 aa8.2□□□□□ -1.1
CUX1-203ENST00000360264 PLNP26678 52 aa8.2□□□□□ -1.1
CUX1-203ENST00000360264 TMEM131Q92545 1883 aa8.2□□□□□ -1.1
CUX1-203ENST00000360264 EIF3GO75821 320 aaKnown RBP eCLIP8.2□□□□□ -1.1
CUX1-203ENST00000360264 LDLRAD2Q5SZI1 272 aa8.2□□□□□ -1.1
CUX1-203ENST00000360264 FOXA2Q9Y261 457 aaPredicted RBP8.2□□□□□ -1.1
CUX1-203ENST00000360264 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.2□□□□□ -1.1
CUX1-203ENST00000360264 VSIG10L2P0DP72 767 aa8.2□□□□□ -1.1
CUX1-203ENST00000360264 OR13A1Q8NGR1 328 aa8.2□□□□□ -1.1
CUX1-203ENST00000360264 NABP2Q9BQ15 211 aa8.2□□□□□ -1.1
CUX1-203ENST00000360264 RRHO14718 337 aa8.2□□□□□ -1.1
CUX1-203ENST00000360264 IL11P20809 199 aa8.2□□□□□ -1.1
CUX1-203ENST00000360264 C19orf48Q6RUI8 117 aa8.2□□□□□ -1.1
CUX1-203ENST00000360264 OR52E5Q8NH55 327 aa8.2□□□□□ -1.1
CUX1-203ENST00000360264 ANKRD11Q6UB99 2663 aaPredicted RBP8.19□□□□□ -1.1
CUX1-203ENST00000360264 CTHRC1Q96CG8 243 aa8.19□□□□□ -1.1
CUX1-203ENST00000360264 MIXL1Q9H2W2 232 aa8.19□□□□□ -1.1
CUX1-203ENST00000360264 IZUMO1RA6ND01 250 aa8.19□□□□□ -1.1
CUX1-203ENST00000360264 ZNF98A6NK75 572 aa8.19□□□□□ -1.1
CUX1-203ENST00000360264 HOXA3O43365 443 aaPredicted RBP8.19□□□□□ -1.1
CUX1-203ENST00000360264 TMEM86BQ8N661 226 aa8.19□□□□□ -1.1
CUX1-203ENST00000360264 SLC25A2Q9BXI2 301 aa8.19□□□□□ -1.1
CUX1-203ENST00000360264 ZNF250P15622 560 aa8.19□□□□□ -1.1
CUX1-203ENST00000360264 OTORQ9NRC9 128 aa8.19□□□□□ -1.1
CUX1-203ENST00000360264 LTBP4Q8N2S1 1624 aa8.19□□□□□ -1.1
CUX1-203ENST00000360264 ERVK11-1P61568 191 aa8.19□□□□□ -1.1
CUX1-203ENST00000360264 MS4A3Q96HJ5 214 aa8.19□□□□□ -1.1
CUX1-203ENST00000360264 HLA-DQB1P01920 261 aa8.19□□□□□ -1.1
CUX1-203ENST00000360264 KLK2P20151 261 aa8.19□□□□□ -1.1
CUX1-203ENST00000360264 ICAM4Q14773 271 aa8.19□□□□□ -1.1
CUX1-203ENST00000360264 NOTCH4Q99466 2003 aa8.19□□□□□ -1.1
CUX1-203ENST00000360264 TGIF2-C20orf24A0A0A6YYL0 155 aa8.19□□□□□ -1.1
CUX1-203ENST00000360264 M0R381 172 aa8.19□□□□□ -1.1
CUX1-203ENST00000360264 FDCSPQ8NFU4 85 aa8.19□□□□□ -1.1
CUX1-203ENST00000360264 TM2D1Q9BX74 207 aa8.19□□□□□ -1.1
CUX1-203ENST00000360264 CECR9P0C854 216 aa8.19□□□□□ -1.1
CUX1-203ENST00000360264 MORN3Q6PF18 240 aaPredicted RBP8.19□□□□□ -1.1
CUX1-203ENST00000360264 TOMM7Q9P0U1 55 aa8.19□□□□□ -1.1
CUX1-203ENST00000360264 FER1L6-AS1Q8NA97 138 aa8.19□□□□□ -1.1
CUX1-203ENST00000360264 USP9YO00507 2555 aaPredicted RBP8.19□□□□□ -1.1
CUX1-203ENST00000360264 CD200R1LQ6Q8B3 271 aa8.19□□□□□ -1.1
CUX1-203ENST00000360264 ZNF600Q6ZNG1 722 aa8.18□□□□□ -1.1
CUX1-203ENST00000360264 POC1AQ8NBT0 407 aa8.18□□□□□ -1.1
CUX1-203ENST00000360264 NXT2Q9NPJ8 142 aaKnown RBP8.18□□□□□ -1.1
CUX1-203ENST00000360264 TMEM14DPA8MWL7 114 aa8.18□□□□□ -1.1
CUX1-203ENST00000360264 TBR1Q16650 682 aa8.18□□□□□ -1.1
CUX1-203ENST00000360264 APOHP02749 345 aaPredicted RBP8.18□□□□□ -1.1
CUX1-203ENST00000360264 BSPH1Q075Z2 132 aa8.18□□□□□ -1.1
CUX1-203ENST00000360264 TICRRQ7Z2Z1 1910 aa8.18□□□□□ -1.1
CUX1-203ENST00000360264 GREB1LQ9C091 1923 aaPredicted RBP8.18□□□□□ -1.1
CUX1-203ENST00000360264 CD8AP01732 235 aa8.18□□□□□ -1.1
CUX1-203ENST00000360264 TRAV8-6A0A0B4J262 113 aa8.18□□□□□ -1.1
CUX1-203ENST00000360264 DDTP30046 118 aa8.18□□□□□ -1.1
CUX1-203ENST00000360264 ZNF660Q6AZW8 331 aaPredicted RBP8.18□□□□□ -1.1
CUX1-203ENST00000360264 GTF3AQ92664 365 aaKnown RBP8.18□□□□□ -1.1
CUX1-203ENST00000360264 RCC1LQ96I51 464 aaKnown RBP8.18□□□□□ -1.1
CUX1-203ENST00000360264 PRSS22Q9GZN4 317 aa8.18□□□□□ -1.1
CUX1-203ENST00000360264 IGKV3-20P01619 116 aa8.18□□□□□ -1.1
CUX1-203ENST00000360264 TRAV14DV4A0A0A6YYC5 116 aa8.18□□□□□ -1.1
CUX1-203ENST00000360264 TMEM50AO95807 157 aa8.18□□□□□ -1.1
CUX1-203ENST00000360264 Q9H3A6 140 aa8.18□□□□□ -1.1
CUX1-203ENST00000360264 PCNX3Q9H6A9 2034 aa8.18□□□□□ -1.1
CUX1-203ENST00000360264 OR10J3Q5JRS4 329 aa8.18□□□□□ -1.1
CUX1-203ENST00000360264 FBXL15Q9H469 300 aa8.18□□□□□ -1.1
CUX1-203ENST00000360264 EFEMP2O95967 443 aa8.18□□□□□ -1.1
CUX1-203ENST00000360264 SLC25A45Q8N413 288 aa8.18□□□□□ -1.1
CUX1-203ENST00000360264 LINC00469Q8N7U9 141 aa8.18□□□□□ -1.1
CUX1-203ENST00000360264 ZNRF1Q8ND25 227 aa8.18□□□□□ -1.1
CUX1-203ENST00000360264 FABP5P3A8MUU1 101 aa8.18□□□□□ -1.1
CUX1-203ENST00000360264 THBDP07204 575 aa8.18□□□□□ -1.1
CUX1-203ENST00000360264 SLC25A38Q96DW6 304 aa8.18□□□□□ -1.1
CUX1-203ENST00000360264 SEPSECSQ9HD40 501 aaKnown RBP8.18□□□□□ -1.1
CUX1-203ENST00000360264 NPDC1Q9NQX5 325 aaPredicted RBP8.18□□□□□ -1.1
CUX1-203ENST00000360264 SLC25A15Q9Y619 301 aa8.18□□□□□ -1.1
CUX1-203ENST00000360264 PEAR1Q5VY43 1037 aaPredicted RBP8.17□□□□□ -1.1
CUX1-203ENST00000360264 DMRT1Q9Y5R6 373 aa8.17□□□□□ -1.1
CUX1-203ENST00000360264 TRAV24A0A0B4J272 114 aa8.17□□□□□ -1.1
CUX1-203ENST00000360264 CD7P09564 240 aa8.17□□□□□ -1.1
CUX1-203ENST00000360264 NRTNQ99748 197 aa8.17□□□□□ -1.1
CUX1-203ENST00000360264 FBLIM1Q8WUP2 373 aa8.17□□□□□ -1.1
CUX1-203ENST00000360264 AKIRIN1Q9H9L7 192 aaPredicted RBP8.17□□□□□ -1.1
CUX1-203ENST00000360264 ST20Q9HBF5 79 aa8.17□□□□□ -1.1
CUX1-203ENST00000360264 SPTBN4Q9H254 2564 aa8.17□□□□□ -1.1
CUX1-203ENST00000360264 H0YL77 283 aa8.17□□□□□ -1.1
CUX1-203ENST00000360264 C1QL1O75973 258 aa8.17□□□□□ -1.1
CUX1-203ENST00000360264 UBE2DNLQ8IWF7 75 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms