RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 YPEL2Q96QA6 119 aa11.46□□□□□ -0.57
VCP-201ENST00000358901 F11RQ9Y624 299 aaKnown RBP11.46□□□□□ -0.57
VCP-201ENST00000358901 E9PQ18 207 aa11.46□□□□□ -0.57
VCP-201ENST00000358901 H3BVH4 76 aa11.46□□□□□ -0.57
VCP-201ENST00000358901 RPP25LQ8N5L8 163 aaKnown RBP11.46□□□□□ -0.57
VCP-201ENST00000358901 WDR90Q96KV7 1748 aa11.46□□□□□ -0.57
VCP-201ENST00000358901 SAA1P0DJI8 122 aaPredicted RBP11.46□□□□□ -0.58
VCP-201ENST00000358901 DUTP33316 252 aaKnown RBP11.46□□□□□ -0.58
VCP-201ENST00000358901 NMSQ5H8A3 153 aa11.46□□□□□ -0.58
VCP-201ENST00000358901 LOC105371242A0A075B767 164 aa11.46□□□□□ -0.58
VCP-201ENST00000358901 IGKV3D-15A0A087WSY6 115 aa11.46□□□□□ -0.58
VCP-201ENST00000358901 FABP2P12104 132 aa11.46□□□□□ -0.58
VCP-201ENST00000358901 ST6GALNAC6Q969X2 333 aa11.46□□□□□ -0.58
VCP-201ENST00000358901 HIST1H2BLQ99880 126 aa11.46□□□□□ -0.58
VCP-201ENST00000358901 PSPNO60542 156 aa11.45□□□□□ -0.58
VCP-201ENST00000358901 OR9G9P0C7N8 305 aa11.45□□□□□ -0.58
VCP-201ENST00000358901 RPS20P60866 119 aaKnown RBP11.45□□□□□ -0.58
VCP-201ENST00000358901 HGFACQ04756 655 aa11.45□□□□□ -0.58
VCP-201ENST00000358901 CLDN16Q9Y5I7 305 aa11.45□□□□□ -0.58
VCP-201ENST00000358901 IGHV3OR16-8A0A075B7F1 116 aa11.45□□□□□ -0.58
VCP-201ENST00000358901 IGHV3-49A0A0A0MS15 119 aa11.45□□□□□ -0.58
VCP-201ENST00000358901 LOC107984156A0A0G2JMH3 177 aa11.45□□□□□ -0.58
VCP-201ENST00000358901 FOXI3A8MTJ6 420 aaPredicted RBP11.45□□□□□ -0.58
VCP-201ENST00000358901 B9A039 149 aa11.45□□□□□ -0.58
VCP-201ENST00000358901 ARL17AQ8IVW1 177 aa11.45□□□□□ -0.58
VCP-201ENST00000358901 PHLDA3Q9Y5J5 127 aa11.45□□□□□ -0.58
VCP-201ENST00000358901 TRBV24-1A0A075B6N3 115 aa11.45□□□□□ -0.58
VCP-201ENST00000358901 NUDT3O95989 172 aa11.45□□□□□ -0.58
VCP-201ENST00000358901 ID1P41134 155 aa11.45□□□□□ -0.58
VCP-201ENST00000358901 PSG9Q00887 426 aa11.45□□□□□ -0.58
VCP-201ENST00000358901 NDUFAF3Q9BU61 184 aa11.45□□□□□ -0.58
VCP-201ENST00000358901 A0A1B0GUT8 65 aa11.44□□□□□ -0.58
VCP-201ENST00000358901 HIGD1CA8MV81 97 aa11.44□□□□□ -0.58
VCP-201ENST00000358901 UCNP55089 124 aa11.44□□□□□ -0.58
VCP-201ENST00000358901 PRB3Q04118 309 aaPredicted RBP11.44□□□□□ -0.58
VCP-201ENST00000358901 NRN1Q9NPD7 142 aa11.44□□□□□ -0.58
VCP-201ENST00000358901 C15orf61A6NNL5 157 aa11.44□□□□□ -0.58
VCP-201ENST00000358901 UPK2O00526 184 aa11.44□□□□□ -0.58
VCP-201ENST00000358901 SNAI2O43623 268 aa11.44□□□□□ -0.58
VCP-201ENST00000358901 SNCGO76070 127 aa11.44□□□□□ -0.58
VCP-201ENST00000358901 TAS2R60P59551 318 aa11.44□□□□□ -0.58
VCP-201ENST00000358901 FOXF2Q12947 444 aa11.44□□□□□ -0.58
VCP-201ENST00000358901 C18orf15Q96N68 181 aa11.44□□□□□ -0.58
VCP-201ENST00000358901 PRDM13Q9H4Q3 707 aa11.44□□□□□ -0.58
VCP-201ENST00000358901 DPM3Q9P2X0 92 aa11.44□□□□□ -0.58
VCP-201ENST00000358901 FOXA2Q9Y261 457 aaPredicted RBP11.44□□□□□ -0.58
VCP-201ENST00000358901 LINC00312Q9Y6C7 94 aa11.44□□□□□ -0.58
VCP-201ENST00000358901 THADAQ6YHU6 1953 aa11.44□□□□□ -0.58
VCP-201ENST00000358901 C7orf71A4D174 169 aa11.44□□□□□ -0.58
VCP-201ENST00000358901 NTN3O00634 580 aaPredicted RBP11.44□□□□□ -0.58
VCP-201ENST00000358901 IGKV1-5P01602 117 aa11.44□□□□□ -0.58
VCP-201ENST00000358901 ADCYAP1P18509 176 aa11.44□□□□□ -0.58
VCP-201ENST00000358901 PLP1P60201 277 aa11.44□□□□□ -0.58
VCP-201ENST00000358901 BSPH1Q075Z2 132 aa11.44□□□□□ -0.58
VCP-201ENST00000358901 SAPCD1Q5SSQ6 148 aa11.44□□□□□ -0.58
VCP-201ENST00000358901 FAM90A1Q86YD7 464 aa11.44□□□□□ -0.58
VCP-201ENST00000358901 GPR82Q96P67 336 aa11.44□□□□□ -0.58
VCP-201ENST00000358901 SPG11Q96JI7 2443 aa11.44□□□□□ -0.58
VCP-201ENST00000358901 SRSF4Q08170 494 aaKnown RBP11.44□□□□□ -0.58
VCP-201ENST00000358901 JOSD1Q15040 202 aaPredicted RBP11.44□□□□□ -0.58
VCP-201ENST00000358901 EFNB3Q15768 340 aa11.44□□□□□ -0.58
VCP-201ENST00000358901 C17orf100A8MU93 164 aa11.43□□□□□ -0.58
VCP-201ENST00000358901 APOBEC3AP31941 199 aaPredicted RBP11.43□□□□□ -0.58
VCP-201ENST00000358901 ADMP35318 185 aa11.43□□□□□ -0.58
VCP-201ENST00000358901 RNFT1Q5M7Z0 435 aa11.43□□□□□ -0.58
VCP-201ENST00000358901 C1QL4Q86Z23 238 aa11.43□□□□□ -0.58
VCP-201ENST00000358901 TMEM105Q8N8V8 129 aa11.43□□□□□ -0.58
VCP-201ENST00000358901 A0A1W2PS18 150 aa11.43□□□□□ -0.58
VCP-201ENST00000358901 MEF2CQ06413 473 aaPredicted RBP11.43□□□□□ -0.58
VCP-201ENST00000358901 IGHV3-23P01764 117 aa11.43□□□□□ -0.58
VCP-201ENST00000358901 PYYP10082 97 aa11.43□□□□□ -0.58
VCP-201ENST00000358901 SELLP14151 372 aa11.43□□□□□ -0.58
VCP-201ENST00000358901 NPPCP23582 126 aa11.43□□□□□ -0.58
VCP-201ENST00000358901 LEMD1Q68G75 181 aa11.43□□□□□ -0.58
VCP-201ENST00000358901 TEX38Q6PEX7 206 aa11.43□□□□□ -0.58
VCP-201ENST00000358901 HIST3H2BBQ8N257 126 aa11.43□□□□□ -0.58
VCP-201ENST00000358901 RNASEH2CQ8TDP1 164 aaKnown RBP11.43□□□□□ -0.58
VCP-201ENST00000358901 HIST1H4GQ99525 98 aa11.43□□□□□ -0.58
VCP-201ENST00000358901 SPRR3Q9UBC9 169 aa11.43□□□□□ -0.58
VCP-201ENST00000358901 TRBV20OR9-2A0A075B6H5 130 aa11.42□□□□□ -0.58
VCP-201ENST00000358901 DMRTA1Q5VZB9 504 aa11.42□□□□□ -0.58
VCP-201ENST00000358901 CLEC2AQ6UVW9 174 aa11.42□□□□□ -0.58
VCP-201ENST00000358901 SSBP4Q9BWG4 385 aaPredicted RBP11.42□□□□□ -0.58
VCP-201ENST00000358901 TRAV9-1A0A075B6T8 112 aa11.42□□□□□ -0.58
VCP-201ENST00000358901 SS18L1O75177 396 aaPredicted RBP11.42□□□□□ -0.58
VCP-201ENST00000358901 APOHP02749 345 aaPredicted RBP11.42□□□□□ -0.58
VCP-201ENST00000358901 TMEM42Q69YG0 159 aa11.42□□□□□ -0.58
VCP-201ENST00000358901 LINC00469Q8N7U9 141 aa11.42□□□□□ -0.58
VCP-201ENST00000358901 RPP21Q9H633 154 aaKnown RBP11.42□□□□□ -0.58
VCP-201ENST00000358901 TRAV1-1A0A0B4J248 108 aa11.42□□□□□ -0.58
VCP-201ENST00000358901 WISP1O95388 367 aa11.42□□□□□ -0.58
VCP-201ENST00000358901 IGKV3-15P01624 115 aa11.42□□□□□ -0.58
VCP-201ENST00000358901 GNG5P63218 68 aa11.42□□□□□ -0.58
VCP-201ENST00000358901 TEX45Q8NA69 505 aa11.42□□□□□ -0.58
VCP-201ENST00000358901 ZNF414Q96IQ9 312 aa11.42□□□□□ -0.58
VCP-201ENST00000358901 SEMA5BQ9P283 1151 aa11.42□□□□□ -0.58
VCP-201ENST00000358901 MGAMO43451 1857 aa11.42□□□□□ -0.58
VCP-201ENST00000358901 MYLKQ15746 1914 aa11.42□□□□□ -0.58
VCP-201ENST00000358901 H7C2G1 150 aa11.42□□□□□ -0.58
VCP-201ENST00000358901 DNLZQ5SXM8 178 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms