RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 SPINK4O60575 86 aa5.58□□□□□ -1.52
VPS13B-202ENST00000357162 YPEL1O60688 119 aa5.58□□□□□ -1.52
VPS13B-202ENST00000357162 CRYBA2P53672 197 aa5.58□□□□□ -1.52
VPS13B-202ENST00000357162 LINC00696Q6ZRV3 163 aa5.58□□□□□ -1.52
VPS13B-202ENST00000357162 YPEL2Q96QA6 119 aa5.58□□□□□ -1.52
VPS13B-202ENST00000357162 REPIN1Q9BWE0 567 aaKnown RBP5.58□□□□□ -1.52
VPS13B-202ENST00000357162 SHISA9B4DS77 424 aa5.57□□□□□ -1.52
VPS13B-202ENST00000357162 ZG16O60844 167 aa5.57□□□□□ -1.52
VPS13B-202ENST00000357162 FAM106AQ4KMX7 169 aa5.57□□□□□ -1.52
VPS13B-202ENST00000357162 TMEM101Q96IK0 257 aa5.57□□□□□ -1.52
VPS13B-202ENST00000357162 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.57□□□□□ -1.52
VPS13B-202ENST00000357162 ID4P47928 161 aa5.57□□□□□ -1.52
VPS13B-202ENST00000357162 CX3CL1P78423 397 aa5.57□□□□□ -1.52
VPS13B-202ENST00000357162 PRNTQ86SH4 94 aa5.57□□□□□ -1.52
VPS13B-202ENST00000357162 IGHV3-20A0A0C4DH32 117 aa5.57□□□□□ -1.52
VPS13B-202ENST00000357162 SPATA46Q5T0L3 261 aa5.57□□□□□ -1.52
VPS13B-202ENST00000357162 C16orf97H3BN30 126 aa5.57□□□□□ -1.52
VPS13B-202ENST00000357162 IGHV2-70P01814 119 aa5.57□□□□□ -1.52
VPS13B-202ENST00000357162 PRSS2P07478 247 aa5.57□□□□□ -1.52
VPS13B-202ENST00000357162 NMSQ5H8A3 153 aa5.57□□□□□ -1.52
VPS13B-202ENST00000357162 WFDC8Q8IUA0 241 aa5.57□□□□□ -1.52
VPS13B-202ENST00000357162 H0Y8X5 98 aa5.57□□□□□ -1.52
VPS13B-202ENST00000357162 IGHV5-51A0A0C4DH38 117 aa5.57□□□□□ -1.52
VPS13B-202ENST00000357162 EMP1P54849 157 aa5.57□□□□□ -1.52
VPS13B-202ENST00000357162 PLEKHB2Q96CS7 222 aa5.57□□□□□ -1.52
VPS13B-202ENST00000357162 LOXL4Q96JB6 756 aa5.57□□□□□ -1.52
VPS13B-202ENST00000357162 TRGV9Q99603 122 aa5.57□□□□□ -1.52
VPS13B-202ENST00000357162 RTN4RQ9BZR6 473 aa5.57□□□□□ -1.52
VPS13B-202ENST00000357162 CHD6Q8TD26 2715 aa5.57□□□□□ -1.52
VPS13B-202ENST00000357162 CRYBB3P26998 211 aa5.57□□□□□ -1.52
VPS13B-202ENST00000357162 ASPHD2Q6ICH7 369 aa5.57□□□□□ -1.52
VPS13B-202ENST00000357162 PPDPFLQ8WWR9 84 aa5.57□□□□□ -1.52
VPS13B-202ENST00000357162 DLL3Q9NYJ7 618 aa5.57□□□□□ -1.52
VPS13B-202ENST00000357162 H3BQ85 93 aa5.57□□□□□ -1.52
VPS13B-202ENST00000357162 CKS1BP61024 79 aa5.57□□□□□ -1.52
VPS13B-202ENST00000357162 MSL2Q9HCI7 577 aa5.57□□□□□ -1.52
VPS13B-202ENST00000357162 LINC00312Q9Y6C7 94 aa5.57□□□□□ -1.52
VPS13B-202ENST00000357162 ZNF585BQ52M93 769 aa5.57□□□□□ -1.52
VPS13B-202ENST00000357162 IFI27L2Q9H2X8 130 aa5.57□□□□□ -1.52
VPS13B-202ENST00000357162 THSD7AQ9UPZ6 1657 aa5.57□□□□□ -1.52
VPS13B-202ENST00000357162 MYOD1P15172 320 aa5.56□□□□□ -1.52
VPS13B-202ENST00000357162 RPL23P62829 140 aaKnown RBP5.56□□□□□ -1.52
VPS13B-202ENST00000357162 PTCRAQ6ISU1 281 aaPredicted RBP5.56□□□□□ -1.52
VPS13B-202ENST00000357162 C1orf210Q8IVY1 113 aa5.56□□□□□ -1.52
VPS13B-202ENST00000357162 CCL4L1Q8NHW4 92 aa5.56□□□□□ -1.52
VPS13B-202ENST00000357162 CT62P0C5K7 136 aa5.56□□□□□ -1.52
VPS13B-202ENST00000357162 ATG2AQ2TAZ0 1938 aa5.56□□□□□ -1.52
VPS13B-202ENST00000357162 ZNF818PQ6ZRF7 136 aa5.56□□□□□ -1.52
VPS13B-202ENST00000357162 SCGB3A1Q96QR1 104 aa5.56□□□□□ -1.52
VPS13B-202ENST00000357162 CEP192Q8TEP8 1941 aa5.56□□□□□ -1.52
VPS13B-202ENST00000357162 IGHV2-5P01817 119 aa5.56□□□□□ -1.52
VPS13B-202ENST00000357162 FCGR2BP31994 310 aaPredicted RBP5.56□□□□□ -1.52
VPS13B-202ENST00000357162 LINC01551Q86U37 167 aa5.56□□□□□ -1.52
VPS13B-202ENST00000357162 LGALS1P09382 135 aaKnown RBP5.56□□□□□ -1.52
VPS13B-202ENST00000357162 OOSP1A8MZH6 123 aa5.56□□□□□ -1.52
VPS13B-202ENST00000357162 NAPSAO96009 420 aa5.56□□□□□ -1.52
VPS13B-202ENST00000357162 DUSP2Q05923 314 aa5.56□□□□□ -1.52
VPS13B-202ENST00000357162 RNF126Q9BV68 326 aa5.56□□□□□ -1.52
VPS13B-202ENST00000357162 TRAV14DV4A0A0A6YYC5 116 aa5.56□□□□□ -1.52
VPS13B-202ENST00000357162 DEFB108AA8MXU0 73 aa5.56□□□□□ -1.52
VPS13B-202ENST00000357162 ZNF883P0CG24 379 aa5.56□□□□□ -1.52
VPS13B-202ENST00000357162 TIMP4Q99727 224 aa5.56□□□□□ -1.52
VPS13B-202ENST00000357162 COL6A5A8TX70 2615 aa5.56□□□□□ -1.52
VPS13B-202ENST00000357162 GZMBP10144 247 aa5.56□□□□□ -1.52
VPS13B-202ENST00000357162 FAM231DQ6ZW35 169 aa5.56□□□□□ -1.52
VPS13B-202ENST00000357162 TDHQ8IZJ6 230 aa5.56□□□□□ -1.52
VPS13B-202ENST00000357162 TMEM54Q969K7 222 aa5.56□□□□□ -1.52
VPS13B-202ENST00000357162 IGKV1D-42A0A075B6H8 117 aa5.56□□□□□ -1.52
VPS13B-202ENST00000357162 IGKV3D-11A0A0A0MRZ8 115 aa5.56□□□□□ -1.52
VPS13B-202ENST00000357162 GRIFINA4D1Z8 144 aa5.56□□□□□ -1.52
VPS13B-202ENST00000357162 RLN3Q8WXF3 142 aa5.56□□□□□ -1.52
VPS13B-202ENST00000357162 EAF1Q96JC9 268 aaPredicted RBP5.56□□□□□ -1.52
VPS13B-202ENST00000357162 ONECUT1Q9UBC0 465 aa5.56□□□□□ -1.52
VPS13B-202ENST00000357162 WDR83OSQ9Y284 106 aa5.56□□□□□ -1.52
VPS13B-202ENST00000357162 RNF115Q9Y4L5 304 aa5.56□□□□□ -1.52
VPS13B-202ENST00000357162 A0A1B0GWJ7 208 aa5.56□□□□□ -1.52
VPS13B-202ENST00000357162 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.56□□□□□ -1.52
VPS13B-202ENST00000357162 TMEM14EPQ6UXP3 125 aa5.56□□□□□ -1.52
VPS13B-202ENST00000357162 FAM57AQ8TBR7 257 aa5.56□□□□□ -1.52
VPS13B-202ENST00000357162 M0R2P5 195 aa5.56□□□□□ -1.52
VPS13B-202ENST00000357162 SYNGR3O43761 229 aa5.56□□□□□ -1.52
VPS13B-202ENST00000357162 PGLYRP4Q96LB8 373 aa5.56□□□□□ -1.52
VPS13B-202ENST00000357162 FOXA2Q9Y261 457 aaPredicted RBP5.56□□□□□ -1.52
VPS13B-202ENST00000357162 IGHV3-9P01782 118 aa5.56□□□□□ -1.52
VPS13B-202ENST00000357162 DNAJC30Q96LL9 226 aa5.56□□□□□ -1.52
VPS13B-202ENST00000357162 CLEC7AQ9BXN2 247 aa5.56□□□□□ -1.52
VPS13B-202ENST00000357162 C15orf61A6NNL5 157 aa5.55□□□□□ -1.52
VPS13B-202ENST00000357162 LHX2P50458 406 aa5.55□□□□□ -1.52
VPS13B-202ENST00000357162 APOHP02749 345 aaPredicted RBP5.55□□□□□ -1.52
VPS13B-202ENST00000357162 TUSC5Q8IXB3 177 aa5.55□□□□□ -1.52
VPS13B-202ENST00000357162 ZPLD1Q8TCW7 415 aa5.55□□□□□ -1.52
VPS13B-202ENST00000357162 PILRBQ9UKJ0 227 aa5.55□□□□□ -1.52
VPS13B-202ENST00000357162 TRAV8-2A0A0B4J237 113 aa5.55□□□□□ -1.52
VPS13B-202ENST00000357162 SLC25A20O43772 301 aa5.55□□□□□ -1.52
VPS13B-202ENST00000357162 THY1P04216 161 aa5.55□□□□□ -1.52
VPS13B-202ENST00000357162 DEFB119Q8N690 84 aa5.55□□□□□ -1.52
VPS13B-202ENST00000357162 IGHV1-24A0A0C4DH33 117 aa5.55□□□□□ -1.52
VPS13B-202ENST00000357162 Q6ZT83 130 aa5.55□□□□□ -1.52
VPS13B-202ENST00000357162 LYZL6O75951 148 aa5.55□□□□□ -1.52
VPS13B-202ENST00000357162 PSG4Q00888 419 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms