RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 INSP01308 110 aa4.89□□□□□ -1.63
SRGAP1-201ENST00000355086 HIST1H4AP62805 103 aaKnown RBP4.89□□□□□ -1.63
SRGAP1-201ENST00000355086 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.89□□□□□ -1.63
SRGAP1-201ENST00000355086 C5orf30Q96GV9 206 aa4.89□□□□□ -1.63
SRGAP1-201ENST00000355086 RCC1LQ96I51 464 aaKnown RBP4.89□□□□□ -1.63
SRGAP1-201ENST00000355086 MSGN1A6NI15 193 aa4.89□□□□□ -1.63
SRGAP1-201ENST00000355086 CREBBPQ92793 2442 aa4.89□□□□□ -1.63
SRGAP1-201ENST00000355086 CIARTQ8N365 385 aaPredicted RBP4.89□□□□□ -1.63
SRGAP1-201ENST00000355086 FNDC4Q9H6D8 234 aaPredicted RBP4.89□□□□□ -1.63
SRGAP1-201ENST00000355086 TOMM40O96008 361 aa4.88□□□□□ -1.63
SRGAP1-201ENST00000355086 UCP3P55916 312 aa4.88□□□□□ -1.63
SRGAP1-201ENST00000355086 SRSF1Q07955 248 aaKnown RBP eCLIP4.88□□□□□ -1.63
SRGAP1-201ENST00000355086 COLQQ9Y215 455 aaPredicted RBP4.88□□□□□ -1.63
SRGAP1-201ENST00000355086 NMBP08949 121 aa4.88□□□□□ -1.63
SRGAP1-201ENST00000355086 FUT5Q11128 374 aa4.88□□□□□ -1.63
SRGAP1-201ENST00000355086 MEGF9Q9H1U4 602 aa4.88□□□□□ -1.63
SRGAP1-201ENST00000355086 KLF4O43474 513 aa4.88□□□□□ -1.63
SRGAP1-201ENST00000355086 DUSP14O95147 198 aaKnown RBP4.88□□□□□ -1.63
SRGAP1-201ENST00000355086 SP9P0CG40 484 aa4.88□□□□□ -1.63
SRGAP1-201ENST00000355086 BSPH1Q075Z2 132 aa4.88□□□□□ -1.63
SRGAP1-201ENST00000355086 CHCHD5Q9BSY4 110 aa4.88□□□□□ -1.63
SRGAP1-201ENST00000355086 LIMS1P48059 325 aa4.88□□□□□ -1.63
SRGAP1-201ENST00000355086 ZP1P60852 638 aa4.88□□□□□ -1.63
SRGAP1-201ENST00000355086 DEFB121Q5J5C9 76 aa4.88□□□□□ -1.63
SRGAP1-201ENST00000355086 HBDP02042 147 aa4.88□□□□□ -1.63
SRGAP1-201ENST00000355086 C11orf44Q8N8P7 122 aa4.88□□□□□ -1.63
SRGAP1-201ENST00000355086 CACNG8Q8WXS5 425 aa4.88□□□□□ -1.63
SRGAP1-201ENST00000355086 OR5P3Q8WZ94 311 aa4.88□□□□□ -1.63
SRGAP1-201ENST00000355086 REPIN1Q9BWE0 567 aaKnown RBP4.88□□□□□ -1.63
SRGAP1-201ENST00000355086 FABP5P3A8MUU1 101 aa4.88□□□□□ -1.63
SRGAP1-201ENST00000355086 LGALS1P09382 135 aaKnown RBP4.88□□□□□ -1.63
SRGAP1-201ENST00000355086 C3orf36Q3SXR2 165 aa4.88□□□□□ -1.63
SRGAP1-201ENST00000355086 ZNF48Q96MX3 618 aaPredicted RBP4.88□□□□□ -1.63
SRGAP1-201ENST00000355086 CYSLTR1Q9Y271 337 aa4.88□□□□□ -1.63
SRGAP1-201ENST00000355086 EVI2AP22794 236 aa4.88□□□□□ -1.63
SRGAP1-201ENST00000355086 THADAQ6YHU6 1953 aa4.88□□□□□ -1.63
SRGAP1-201ENST00000355086 IGLV1-36A0A0B4J1U3 117 aa4.88□□□□□ -1.63
SRGAP1-201ENST00000355086 FAM27E3Q08E93 113 aa4.88□□□□□ -1.63
SRGAP1-201ENST00000355086 DTX1Q86Y01 620 aa4.88□□□□□ -1.63
SRGAP1-201ENST00000355086 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.88□□□□□ -1.63
SRGAP1-201ENST00000355086 IZUMO1RA6ND01 250 aa4.88□□□□□ -1.63
SRGAP1-201ENST00000355086 LOC101059948A0A1B0GTJ6 334 aa4.88□□□□□ -1.63
SRGAP1-201ENST00000355086 FAM19A2Q8N3H0 131 aa4.88□□□□□ -1.63
SRGAP1-201ENST00000355086 DMRT1Q9Y5R6 373 aa4.88□□□□□ -1.63
SRGAP1-201ENST00000355086 CHTOPQ9Y3Y2 248 aaKnown RBP4.88□□□□□ -1.63
SRGAP1-201ENST00000355086 M0R2P5 195 aa4.88□□□□□ -1.63
SRGAP1-201ENST00000355086 MORN3Q6PF18 240 aaPredicted RBP4.88□□□□□ -1.63
SRGAP1-201ENST00000355086 POC1AQ8NBT0 407 aa4.88□□□□□ -1.63
SRGAP1-201ENST00000355086 TRBV5-7A0A0A0MS05 114 aa4.88□□□□□ -1.63
SRGAP1-201ENST00000355086 LINC00587B1AMM8 73 aa4.88□□□□□ -1.63
SRGAP1-201ENST00000355086 IMMP2LQ96T52 175 aa4.88□□□□□ -1.63
SRGAP1-201ENST00000355086 IGKV1D-42A0A075B6H8 117 aa4.88□□□□□ -1.63
SRGAP1-201ENST00000355086 EGR4Q05215 589 aa4.88□□□□□ -1.63
SRGAP1-201ENST00000355086 TRGV11A0A075B6L2 103 aa4.88□□□□□ -1.63
SRGAP1-201ENST00000355086 HOXD3P31249 432 aaPredicted RBP4.87□□□□□ -1.63
SRGAP1-201ENST00000355086 TFF3Q07654 80 aa4.87□□□□□ -1.63
SRGAP1-201ENST00000355086 KBTBD11-OT1A0A1B0GTJ5 212 aa4.87□□□□□ -1.63
SRGAP1-201ENST00000355086 CD160O95971 181 aa4.87□□□□□ -1.63
SRGAP1-201ENST00000355086 CYB5R2Q6BCY4 276 aa4.87□□□□□ -1.63
SRGAP1-201ENST00000355086 SLC25A45Q8N413 288 aa4.87□□□□□ -1.63
SRGAP1-201ENST00000355086 PRB3Q04118 309 aaPredicted RBP4.87□□□□□ -1.63
SRGAP1-201ENST00000355086 PAX4O43316 350 aa4.87□□□□□ -1.63
SRGAP1-201ENST00000355086 CECR9P0C854 216 aa4.87□□□□□ -1.63
SRGAP1-201ENST00000355086 FAM201AQ5SY85 155 aa4.87□□□□□ -1.63
SRGAP1-201ENST00000355086 IGKV1-8A0A0C4DH67 115 aa4.87□□□□□ -1.63
SRGAP1-201ENST00000355086 TMEM155Q4W5P6 130 aa4.87□□□□□ -1.63
SRGAP1-201ENST00000355086 RNASE6Q93091 150 aaKnown RBP4.87□□□□□ -1.63
SRGAP1-201ENST00000355086 AMELYQ99218 206 aa4.87□□□□□ -1.63
SRGAP1-201ENST00000355086 GAGE2EQ4V326 116 aa4.87□□□□□ -1.63
SRGAP1-201ENST00000355086 GAGE2DQ9UEU5 116 aa4.87□□□□□ -1.63
SRGAP1-201ENST00000355086 IGHV3-64A0A075B6Q5 118 aa4.87□□□□□ -1.63
SRGAP1-201ENST00000355086 ATXN8Q156A1 80 aa4.87□□□□□ -1.63
SRGAP1-201ENST00000355086 PPP1R3EQ9H7J1 279 aa4.87□□□□□ -1.63
SRGAP1-201ENST00000355086 METRNQ9UJH8 293 aa4.87□□□□□ -1.63
SRGAP1-201ENST00000355086 SAP25Q8TEE9 199 aa4.87□□□□□ -1.63
SRGAP1-201ENST00000355086 A8MWV9 139 aa4.87□□□□□ -1.63
SRGAP1-201ENST00000355086 C1orf100Q5SVJ3 147 aa4.87□□□□□ -1.63
SRGAP1-201ENST00000355086 WDYHV1Q96HA8 205 aa4.87□□□□□ -1.63
SRGAP1-201ENST00000355086 ORMDL2Q53FV1 153 aa4.87□□□□□ -1.63
SRGAP1-201ENST00000355086 Q5PR19 223 aa4.87□□□□□ -1.63
SRGAP1-201ENST00000355086 J3QW42 95 aa4.87□□□□□ -1.63
SRGAP1-201ENST00000355086 ZNF708P17019 499 aa4.87□□□□□ -1.63
SRGAP1-201ENST00000355086 MIR17HGQ75NE6 70 aa4.87□□□□□ -1.63
SRGAP1-201ENST00000355086 PPP1R32Q7Z5V6 425 aa4.87□□□□□ -1.63
SRGAP1-201ENST00000355086 GZMBP10144 247 aa4.86□□□□□ -1.63
SRGAP1-201ENST00000355086 ATP5G3P48201 142 aa4.86□□□□□ -1.63
SRGAP1-201ENST00000355086 FBLN7Q53RD9 439 aa4.86□□□□□ -1.63
SRGAP1-201ENST00000355086 WFDC12Q8WWY7 111 aa4.86□□□□□ -1.63
SRGAP1-201ENST00000355086 EFNB1P98172 346 aa4.86□□□□□ -1.63
SRGAP1-201ENST00000355086 H3BUT2 72 aa4.86□□□□□ -1.63
SRGAP1-201ENST00000355086 ITGB1BP1O14713 200 aa4.86□□□□□ -1.63
SRGAP1-201ENST00000355086 NPC2P61916 151 aa4.86□□□□□ -1.63
SRGAP1-201ENST00000355086 C8orf82Q6P1X6 216 aaPredicted RBP4.86□□□□□ -1.63
SRGAP1-201ENST00000355086 SIGMAR1Q99720 223 aa4.86□□□□□ -1.63
SRGAP1-201ENST00000355086 ERG28Q9UKR5 140 aa4.86□□□□□ -1.63
SRGAP1-201ENST00000355086 CD33P20138 364 aa4.86□□□□□ -1.63
SRGAP1-201ENST00000355086 IGHMP01871 453 aa4.86□□□□□ -1.63
SRGAP1-201ENST00000355086 RHOGP84095 191 aa4.86□□□□□ -1.63
SRGAP1-201ENST00000355086 ORAOV1Q8WV07 137 aa4.86□□□□□ -1.63
SRGAP1-201ENST00000355086 GP6Q9HCN6 339 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms