RNA–Protein interactions for RNA: ENST00000354504.7

VPS54-202, Transcript of VPS54, GARP complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS54, Length 3,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS54-202ENST00000354504 SGPP2Q8IWX5 399 aa1.81□□□□□ -2.12
VPS54-202ENST00000354504 Q8N976 141 aa1.81□□□□□ -2.12
VPS54-202ENST00000354504 THAP8Q8NA92 274 aa1.81□□□□□ -2.12
VPS54-202ENST00000354504 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.81□□□□□ -2.12
VPS54-202ENST00000354504 OR5C1Q8NGR4 320 aa1.81□□□□□ -2.12
VPS54-202ENST00000354504 MRGPRDQ8TDS7 321 aa1.81□□□□□ -2.12
VPS54-202ENST00000354504 RXFP4Q8TDU9 374 aa1.81□□□□□ -2.12
VPS54-202ENST00000354504 LRRC29Q8WV35 223 aa1.81□□□□□ -2.12
VPS54-202ENST00000354504 TMEM37Q8WXS4 190 aa1.81□□□□□ -2.12
VPS54-202ENST00000354504 GGTLC1Q9BX51 225 aa1.81□□□□□ -2.12
VPS54-202ENST00000354504 SLC25A2Q9BXI2 301 aa1.81□□□□□ -2.12
VPS54-202ENST00000354504 NPCDR1Q9BY65 106 aa1.81□□□□□ -2.12
VPS54-202ENST00000354504 SIRPDQ9H106 197 aa1.81□□□□□ -2.12
VPS54-202ENST00000354504 OR2D2Q9H210 308 aa1.81□□□□□ -2.12
VPS54-202ENST00000354504 SPACA1Q9HBV2 294 aa1.81□□□□□ -2.12
VPS54-202ENST00000354504 CALYQ9NYX4 217 aa1.81□□□□□ -2.12
VPS54-202ENST00000354504 RNF150Q9ULK6 438 aa1.81□□□□□ -2.12
VPS54-202ENST00000354504 PROCRQ9UNN8 238 aa1.81□□□□□ -2.12
VPS54-202ENST00000354504 SLC7A11Q9UPY5 501 aa1.81□□□□□ -2.12
VPS54-202ENST00000354504 FBXO7Q9Y3I1 522 aa1.81□□□□□ -2.12
VPS54-202ENST00000354504 LINC00312Q9Y6C7 94 aa1.81□□□□□ -2.12
VPS54-202ENST00000354504 ACANP16112 2415 aa1.81□□□□□ -2.12
VPS54-202ENST00000354504 A0A087WWC5 75 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 IGHV3-43A0A0B4J1X8 118 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 TMEM30CPA0ZSE6 113 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 FCN1O00602 326 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 HSPA12AO43301 675 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 SSSCA1O60232 199 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 EIF3GO75821 320 aaKnown RBP eCLIP1.8□□□□□ -2.12
VPS54-202ENST00000354504 RBP4P02753 201 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 IGHV3-43DP0DP04 118 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 IL2RGP31785 369 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 UQCRFS1P47985 274 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 CAMLGP49069 296 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 PPOXP50336 477 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 TMEM267Q0VDI3 215 aaPredicted RBP1.8□□□□□ -2.12
VPS54-202ENST00000354504 SPATA31B1PQ5VZV4 182 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 OR4A47Q6IF82 309 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 PDZD9Q8IXQ8 264 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 SPAG16Q8N0X2 631 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 TCTEX1D1Q8N7M0 179 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 DEFB108BQ8NET1 73 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 OR11H6Q8NGC7 330 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 OR10J5Q8NHC4 309 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 C11orf52Q96A22 123 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 NKX6-2Q9C056 277 aaPredicted RBP1.8□□□□□ -2.12
VPS54-202ENST00000354504 MAGT1Q9H0U3 335 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 OR2S2Q9NQN1 319 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 TMEM242Q9NWH2 141 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 BET1LQ9NYM9 111 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 CACNG5Q9UF02 275 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 POLDIP2Q9Y2S7 368 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 KCNIP3Q9Y2W7 256 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 COX11Q9Y6N1 276 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 I3L2K1 104 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 SH2D1BO14796 132 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 SYNGR2O43760 224 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 NXPH2O95156 264 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 GYPAP02724 150 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 OR4A8P0C604 315 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 TPT1P13693 172 aaKnown RBP1.8□□□□□ -2.12
VPS54-202ENST00000354504 CCL3L1P16619 93 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 OMGP23515 440 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 CRIP2P52943 208 aaPredicted RBP1.8□□□□□ -2.12
VPS54-202ENST00000354504 ARPC4P59998 168 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 RAB2AP61019 212 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 LMO4P61968 165 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 NDPQ00604 133 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 ZNF816Q0VGE8 651 aaPredicted RBP1.8□□□□□ -2.12
VPS54-202ENST00000354504 Q6ZRG5 221 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 COX8CQ7Z4L0 72 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 NPBQ8NG41 125 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 OR2Z1Q8NG97 314 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 Q8WTZ3 238 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 TAF15Q92804 592 aaKnown RBP eCLIP1.8□□□□□ -2.12
VPS54-202ENST00000354504 FAM122AQ96E09 287 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 URB1-AS1Q96HZ7 61 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 CLCC1Q96S66 551 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 TAS2R3Q9NYW6 316 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 KCNIP1Q9NZI2 227 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 NDRG3Q9UGV2 375 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 ZNF257Q9Y2Q1 563 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 YTHDF2Q9Y5A9 579 aaKnown RBP1.8□□□□□ -2.12
VPS54-202ENST00000354504 A0A1B0GV50 99 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 I3L521 148 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 UPK2O00526 184 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 KBTBD11O94819 623 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 HSPB1P04792 205 aaKnown RBP1.8□□□□□ -2.12
VPS54-202ENST00000354504 IGHV1-8P0DP01 117 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 CD1BP29016 333 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 ELLP55199 621 aaPredicted RBP1.8□□□□□ -2.12
VPS54-202ENST00000354504 GNB1P62873 340 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 PRCDQ00LT1 54 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 ZNF266Q14584 549 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 PRAMEF5Q5TYX0 476 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 SPNS3Q6ZMD2 512 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 ZADH2Q8N4Q0 377 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 SPERTQ8NA61 448 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 OR10W1Q8NGF6 305 aa1.8□□□□□ -2.12
VPS54-202ENST00000354504 RFESDQ8TAC1 157 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms