RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 MORN2Q502X0 79 aa7.01□□□□□ -1.29
TRIM55-204ENST00000353317 SPATA31B1PQ5VZV4 182 aa7.01□□□□□ -1.29
TRIM55-204ENST00000353317 Q6ZWC4 215 aa7.01□□□□□ -1.29
TRIM55-204ENST00000353317 SSX8Q7RTT4 187 aa7.01□□□□□ -1.29
TRIM55-204ENST00000353317 MUC15Q8N387 334 aa7.01□□□□□ -1.29
TRIM55-204ENST00000353317 FAM216BQ8N7L0 139 aa7.01□□□□□ -1.29
TRIM55-204ENST00000353317 CCL17Q92583 94 aa7.01□□□□□ -1.29
TRIM55-204ENST00000353317 YPEL2Q96QA6 119 aa7.01□□□□□ -1.29
TRIM55-204ENST00000353317 CCL13Q99616 98 aa7.01□□□□□ -1.29
TRIM55-204ENST00000353317 TMEM106BQ9NUM4 274 aa7.01□□□□□ -1.29
TRIM55-204ENST00000353317 LSM4Q9Y4Z0 139 aaKnown RBP7.01□□□□□ -1.29
TRIM55-204ENST00000353317 CSMD1Q96PZ7 3565 aa7.01□□□□□ -1.29
TRIM55-204ENST00000353317 CELSR1Q9NYQ6 3014 aa7.01□□□□□ -1.29
TRIM55-204ENST00000353317 FAM90A9PA6NNJ1 464 aa7□□□□□ -1.29
TRIM55-204ENST00000353317 ZNF705FA8MVS1 300 aaPredicted RBP7□□□□□ -1.29
TRIM55-204ENST00000353317 M0R143 59 aa7□□□□□ -1.29
TRIM55-204ENST00000353317 M0R1X1 148 aa7□□□□□ -1.29
TRIM55-204ENST00000353317 FOXH1O75593 365 aa7□□□□□ -1.29
TRIM55-204ENST00000353317 ZNF705DP0CH99 300 aaPredicted RBP7□□□□□ -1.29
TRIM55-204ENST00000353317 ZNF705BP0CI00 300 aaPredicted RBP7□□□□□ -1.29
TRIM55-204ENST00000353317 IGFBP2P18065 325 aa7□□□□□ -1.29
TRIM55-204ENST00000353317 RAB4AP20338 218 aa7□□□□□ -1.29
TRIM55-204ENST00000353317 ZNF90Q03938 601 aa7□□□□□ -1.29
TRIM55-204ENST00000353317 ARSJQ5FYB0 599 aaPredicted RBP7□□□□□ -1.29
TRIM55-204ENST00000353317 STUMQ69YW2 141 aa7□□□□□ -1.29
TRIM55-204ENST00000353317 LYPD2Q6UXB3 125 aa7□□□□□ -1.29
TRIM55-204ENST00000353317 C1orf229Q6ZS94 237 aaPredicted RBP7□□□□□ -1.29
TRIM55-204ENST00000353317 OR52E5Q8NH55 327 aa7□□□□□ -1.29
TRIM55-204ENST00000353317 GAFA1Q96PS6 74 aa7□□□□□ -1.29
TRIM55-204ENST00000353317 SAP30LQ9HAJ7 183 aa7□□□□□ -1.29
TRIM55-204ENST00000353317 GNG12Q9UBI6 72 aa7□□□□□ -1.29
TRIM55-204ENST00000353317 IL6RP08887 468 aaPredicted RBP7□□□□□ -1.29
TRIM55-204ENST00000353317 GCHFRP30047 84 aa7□□□□□ -1.29
TRIM55-204ENST00000353317 RPL29P47914 159 aaKnown RBP7□□□□□ -1.29
TRIM55-204ENST00000353317 MZT1Q08AG7 82 aa7□□□□□ -1.29
TRIM55-204ENST00000353317 NPVFQ9HCQ7 196 aa7□□□□□ -1.29
TRIM55-204ENST00000353317 TMEM140Q9NV12 185 aa7□□□□□ -1.29
TRIM55-204ENST00000353317 IL36BQ9NZH7 164 aa7□□□□□ -1.29
TRIM55-204ENST00000353317 B9A039 149 aa6.99□□□□□ -1.29
TRIM55-204ENST00000353317 F2Z2F3 143 aa6.99□□□□□ -1.29
TRIM55-204ENST00000353317 TMEM178BH3BS89 294 aa6.99□□□□□ -1.29
TRIM55-204ENST00000353317 TNFRSF13BO14836 293 aaPredicted RBP6.99□□□□□ -1.29
TRIM55-204ENST00000353317 SERF1AO75920 110 aa6.99□□□□□ -1.29
TRIM55-204ENST00000353317 G0S2P27469 103 aa6.99□□□□□ -1.29
TRIM55-204ENST00000353317 TPTE2P1Q5T6R2 138 aa6.99□□□□□ -1.29
TRIM55-204ENST00000353317 TOMM20LQ6UXN7 152 aa6.99□□□□□ -1.29
TRIM55-204ENST00000353317 STPG3Q8N7X2 389 aa6.99□□□□□ -1.29
TRIM55-204ENST00000353317 MRPL18Q9H0U6 180 aaKnown RBP6.99□□□□□ -1.29
TRIM55-204ENST00000353317 ZFHX3Q15911 3703 aa6.99□□□□□ -1.29
TRIM55-204ENST00000353317 USP9YO00507 2555 aaPredicted RBP6.99□□□□□ -1.29
TRIM55-204ENST00000353317 CRISP2P16562 243 aa6.99□□□□□ -1.29
TRIM55-204ENST00000353317 CDKN1AP38936 164 aa6.99□□□□□ -1.29
TRIM55-204ENST00000353317 LOXL3P58215 753 aa6.99□□□□□ -1.29
TRIM55-204ENST00000353317 ERVK-16P61578 105 aa6.99□□□□□ -1.29
TRIM55-204ENST00000353317 TEX36Q5VZQ5 186 aa6.99□□□□□ -1.29
TRIM55-204ENST00000353317 C11orf71Q6IPW1 123 aa6.99□□□□□ -1.29
TRIM55-204ENST00000353317 ZNF788Q6ZQV5 615 aa6.99□□□□□ -1.29
TRIM55-204ENST00000353317 IFI27L2Q9H2X8 130 aa6.99□□□□□ -1.29
TRIM55-204ENST00000353317 CHODLQ9H9P2 273 aa6.99□□□□□ -1.29
TRIM55-204ENST00000353317 DYNLRB1Q9NP97 96 aa6.99□□□□□ -1.29
TRIM55-204ENST00000353317 JPT1Q9UK76 154 aa6.99□□□□□ -1.29
TRIM55-204ENST00000353317 TCF19Q9Y242 345 aa6.99□□□□□ -1.29
TRIM55-204ENST00000353317 POLQO75417 2590 aa6.99□□□□□ -1.29
TRIM55-204ENST00000353317 WNK2Q9Y3S1 2297 aa6.99□□□□□ -1.29
TRIM55-204ENST00000353317 NDUFS7O75251 213 aa6.98□□□□□ -1.29
TRIM55-204ENST00000353317 ESDP10768 282 aa6.98□□□□□ -1.29
TRIM55-204ENST00000353317 TNFSF4P23510 183 aa6.98□□□□□ -1.29
TRIM55-204ENST00000353317 LGALS4P56470 323 aa6.98□□□□□ -1.29
TRIM55-204ENST00000353317 TPPP2P59282 170 aa6.98□□□□□ -1.29
TRIM55-204ENST00000353317 OR5I1Q13606 314 aa6.98□□□□□ -1.29
TRIM55-204ENST00000353317 TRAT1Q6PIZ9 186 aa6.98□□□□□ -1.29
TRIM55-204ENST00000353317 TEPPQ6URK8 271 aa6.98□□□□□ -1.29
TRIM55-204ENST00000353317 EAF1Q96JC9 268 aaPredicted RBP6.98□□□□□ -1.29
TRIM55-204ENST00000353317 S1PR3Q99500 378 aa6.98□□□□□ -1.29
TRIM55-204ENST00000353317 HSPB9Q9BQS6 159 aa6.98□□□□□ -1.29
TRIM55-204ENST00000353317 CTSZQ9UBR2 303 aa6.98□□□□□ -1.29
TRIM55-204ENST00000353317 TET2Q6N021 2002 aaPredicted RBP6.98□□□□□ -1.29
TRIM55-204ENST00000353317 FCN1O00602 326 aa6.98□□□□□ -1.29
TRIM55-204ENST00000353317 TNFRSF1AP19438 455 aa6.98□□□□□ -1.29
TRIM55-204ENST00000353317 IER3P46695 156 aa6.98□□□□□ -1.29
TRIM55-204ENST00000353317 RHOBP62745 196 aa6.98□□□□□ -1.29
TRIM55-204ENST00000353317 PAFAH1B2P68402 229 aa6.98□□□□□ -1.29
TRIM55-204ENST00000353317 ZNF705AQ6ZN79 300 aaPredicted RBP6.98□□□□□ -1.29
TRIM55-204ENST00000353317 TEX43Q6ZNM6 134 aa6.98□□□□□ -1.29
TRIM55-204ENST00000353317 OR4P4Q8NGL7 312 aa6.98□□□□□ -1.29
TRIM55-204ENST00000353317 OR1L6Q8NGR2 347 aa6.98□□□□□ -1.29
TRIM55-204ENST00000353317 DDB2Q92466 427 aa6.98□□□□□ -1.29
TRIM55-204ENST00000353317 LEAP2Q969E1 77 aa6.98□□□□□ -1.29
TRIM55-204ENST00000353317 C11orf52Q96A22 123 aa6.98□□□□□ -1.29
TRIM55-204ENST00000353317 TRAV9-1A0A075B6T8 112 aa6.97□□□□□ -1.29
TRIM55-204ENST00000353317 TRGV10A0A0A0MS01 117 aa6.97□□□□□ -1.29
TRIM55-204ENST00000353317 C15orf61A6NNL5 157 aa6.97□□□□□ -1.29
TRIM55-204ENST00000353317 SNURFLB1AK76 121 aa6.97□□□□□ -1.29
TRIM55-204ENST00000353317 C9JCJ5 164 aa6.97□□□□□ -1.29
TRIM55-204ENST00000353317 MMP23AO75900 390 aa6.97□□□□□ -1.29
TRIM55-204ENST00000353317 CGB3P0DN86 165 aa6.97□□□□□ -1.29
TRIM55-204ENST00000353317 CGB7P0DN87 165 aa6.97□□□□□ -1.29
TRIM55-204ENST00000353317 MYOD1P15172 320 aa6.97□□□□□ -1.29
TRIM55-204ENST00000353317 MMD2Q8IY49 270 aa6.97□□□□□ -1.29
TRIM55-204ENST00000353317 SLC24A4Q8NFF2 622 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms