RNA–Protein interactions for RNA: ENST00000347557.6

SMTN-202, Transcript of smoothelin, humanhuman

TSL 1 (best) BASIC

Gene SMTN, Length 3,130 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-202ENST00000347557 TRAV5A0A0B4J249 113 aa11.95□□□□□ -0.5
SMTN-202ENST00000347557 C17orf58Q2M2W7 97 aa11.95□□□□□ -0.5
SMTN-202ENST00000347557 TIGITQ495A1 244 aa11.95□□□□□ -0.5
SMTN-202ENST00000347557 NTF3P20783 257 aa11.95□□□□□ -0.5
SMTN-202ENST00000347557 MBNL2Q5VZF2 373 aaKnown RBP11.95□□□□□ -0.5
SMTN-202ENST00000347557 SIGLECL1Q8N7X8 197 aa11.95□□□□□ -0.5
SMTN-202ENST00000347557 OR52E5Q8NH55 327 aa11.95□□□□□ -0.5
SMTN-202ENST00000347557 LINC00479Q96M42 142 aa11.95□□□□□ -0.5
SMTN-202ENST00000347557 SLC35D1Q9NTN3 355 aa11.95□□□□□ -0.5
SMTN-202ENST00000347557 MGAQ8IWI9 3026 aa11.94□□□□□ -0.5
SMTN-202ENST00000347557 SGK494Q96LW2 274 aa11.94□□□□□ -0.5
SMTN-202ENST00000347557 TRAV17A0A0B4J275 112 aa11.94□□□□□ -0.5
SMTN-202ENST00000347557 TNFSF13O75888 250 aa11.94□□□□□ -0.5
SMTN-202ENST00000347557 PLAUP00749 431 aa11.94□□□□□ -0.5
SMTN-202ENST00000347557 IGHG3P01860 377 aa11.94□□□□□ -0.5
SMTN-202ENST00000347557 CCL8P80075 99 aa11.94□□□□□ -0.5
SMTN-202ENST00000347557 PRR27Q6MZM9 219 aa11.94□□□□□ -0.5
SMTN-202ENST00000347557 VAMP8Q9BV40 100 aa11.94□□□□□ -0.5
SMTN-202ENST00000347557 DCHS1Q96JQ0 3298 aa11.94□□□□□ -0.5
SMTN-202ENST00000347557 KBTBD11-OT1A0A1B0GTJ5 212 aa11.93□□□□□ -0.5
SMTN-202ENST00000347557 SRRM4A7MD48 611 aaKnown RBP11.93□□□□□ -0.5
SMTN-202ENST00000347557 AMTP48728 403 aa11.93□□□□□ -0.5
SMTN-202ENST00000347557 TNFAIP6P98066 277 aaPredicted RBP11.93□□□□□ -0.5
SMTN-202ENST00000347557 UBE2V1Q13404 147 aa11.93□□□□□ -0.5
SMTN-202ENST00000347557 TMEM108Q6UXF1 575 aa11.93□□□□□ -0.5
SMTN-202ENST00000347557 SLC35E1Q96K37 410 aa11.93□□□□□ -0.5
SMTN-202ENST00000347557 TXNDC17Q9BRA2 123 aa11.93□□□□□ -0.5
SMTN-202ENST00000347557 GNB4Q9HAV0 340 aa11.93□□□□□ -0.5
SMTN-202ENST00000347557 PLSCR4Q9NRQ2 329 aa11.93□□□□□ -0.5
SMTN-202ENST00000347557 DSCAMO60469 2012 aa11.93□□□□□ -0.5
SMTN-202ENST00000347557 IGKV1OR2-108A0A075B7D4 117 aa11.93□□□□□ -0.5
SMTN-202ENST00000347557 F2RL2O00254 374 aa11.93□□□□□ -0.5
SMTN-202ENST00000347557 NDUFB8O95169 186 aa11.93□□□□□ -0.5
SMTN-202ENST00000347557 KIR2DS2P43631 304 aa11.93□□□□□ -0.5
SMTN-202ENST00000347557 LGALS4P56470 323 aa11.93□□□□□ -0.5
SMTN-202ENST00000347557 LINC00310P59036 64 aa11.93□□□□□ -0.5
SMTN-202ENST00000347557 YPEL3P61236 119 aaPredicted RBP11.93□□□□□ -0.5
SMTN-202ENST00000347557 DEFB124Q8NES8 71 aa11.93□□□□□ -0.5
SMTN-202ENST00000347557 OR2T6Q8NHC8 308 aa11.93□□□□□ -0.5
SMTN-202ENST00000347557 ORAOV1Q8WV07 137 aa11.93□□□□□ -0.5
SMTN-202ENST00000347557 MIEN1Q9BRT3 115 aa11.93□□□□□ -0.5
SMTN-202ENST00000347557 SLC45A2Q9UMX9 530 aa11.93□□□□□ -0.5
SMTN-202ENST00000347557 PPIAL4AQ9Y536 164 aa11.93□□□□□ -0.5
SMTN-202ENST00000347557 SLC25A15Q9Y619 301 aa11.93□□□□□ -0.5
SMTN-202ENST00000347557 PLXNB1O43157 2135 aa11.93□□□□□ -0.5
SMTN-202ENST00000347557 COL27A1Q8IZC6 1860 aaPredicted RBP11.93□□□□□ -0.5
SMTN-202ENST00000347557 M0R296 226 aa11.93□□□□□ -0.5
SMTN-202ENST00000347557 ZNF253O75346 499 aa11.93□□□□□ -0.5
SMTN-202ENST00000347557 IGLV1-44P01699 117 aa11.93□□□□□ -0.5
SMTN-202ENST00000347557 LINC00869P0C866 280 aa11.93□□□□□ -0.5
SMTN-202ENST00000347557 APELAP0DMC3 54 aa11.93□□□□□ -0.5
SMTN-202ENST00000347557 FAM19A2Q8N3H0 131 aa11.93□□□□□ -0.5
SMTN-202ENST00000347557 DDB2Q92466 427 aa11.93□□□□□ -0.5
SMTN-202ENST00000347557 ZNF430Q9H8G1 570 aaPredicted RBP11.93□□□□□ -0.5
SMTN-202ENST00000347557 TMEM14BQ9NUH8 114 aa11.93□□□□□ -0.5
SMTN-202ENST00000347557 IL19Q9UHD0 177 aa11.93□□□□□ -0.5
SMTN-202ENST00000347557 RIF1Q5UIP0 2472 aaKnown RBP11.93□□□□□ -0.5
SMTN-202ENST00000347557 TRAV34A0A0B4J273 112 aa11.92□□□□□ -0.5
SMTN-202ENST00000347557 TMPRSS3P57727 454 aa11.92□□□□□ -0.5
SMTN-202ENST00000347557 C1orf162Q8NEQ5 155 aaPredicted RBP11.92□□□□□ -0.5
SMTN-202ENST00000347557 TECRQ9NZ01 308 aaKnown RBP11.92□□□□□ -0.5
SMTN-202ENST00000347557 LAMA5O15230 3695 aa11.92□□□□□ -0.5
SMTN-202ENST00000347557 FAM90A9PA6NNJ1 464 aa11.92□□□□□ -0.5
SMTN-202ENST00000347557 RPL19P84098 196 aaKnown RBP11.92□□□□□ -0.5
SMTN-202ENST00000347557 DKK4Q9UBT3 224 aa11.92□□□□□ -0.5
SMTN-202ENST00000347557 V9GYV3 84 aa11.92□□□□□ -0.5
SMTN-202ENST00000347557 RANP62826 216 aaKnown RBP11.91□□□□□ -0.5
SMTN-202ENST00000347557 GUSBP1Q15486 140 aa11.91□□□□□ -0.5
SMTN-202ENST00000347557 MORN5Q5VZ52 161 aa11.91□□□□□ -0.5
SMTN-202ENST00000347557 ATOH7Q8N100 152 aa11.91□□□□□ -0.5
SMTN-202ENST00000347557 RNF7Q9UBF6 113 aa11.91□□□□□ -0.5
SMTN-202ENST00000347557 FOXA2Q9Y261 457 aaPredicted RBP11.91□□□□□ -0.5
SMTN-202ENST00000347557 RNF114Q9Y508 228 aa11.91□□□□□ -0.5
SMTN-202ENST00000347557 TRGV8A0A0C4DH27 118 aa11.91□□□□□ -0.5
SMTN-202ENST00000347557 GGTLC3B5MD39 225 aa11.91□□□□□ -0.5
SMTN-202ENST00000347557 NBEAP1P0C6P0 100 aa11.91□□□□□ -0.5
SMTN-202ENST00000347557 SRIP30626 198 aa11.91□□□□□ -0.5
SMTN-202ENST00000347557 SELENOVP59797 346 aa11.91□□□□□ -0.5
SMTN-202ENST00000347557 UBE2L3P68036 154 aaKnown RBP11.91□□□□□ -0.5
SMTN-202ENST00000347557 RTL8BQ17RB0 113 aa11.91□□□□□ -0.5
SMTN-202ENST00000347557 TMEM249Q2WGJ8 235 aa11.91□□□□□ -0.5
SMTN-202ENST00000347557 COMMD5Q9GZQ3 224 aa11.91□□□□□ -0.5
SMTN-202ENST00000347557 SPENQ96T58 3664 aaKnown RBP11.91□□□□□ -0.5
SMTN-202ENST00000347557 PRR20EP86478 221 aa11.91□□□□□ -0.5
SMTN-202ENST00000347557 PRR20CP86479 221 aa11.91□□□□□ -0.5
SMTN-202ENST00000347557 PRR20DP86480 221 aa11.91□□□□□ -0.5
SMTN-202ENST00000347557 PRR20BP86481 221 aa11.91□□□□□ -0.5
SMTN-202ENST00000347557 PRR20AP86496 221 aa11.91□□□□□ -0.5
SMTN-202ENST00000347557 C10orf55Q5SWW7 151 aa11.91□□□□□ -0.5
SMTN-202ENST00000347557 ZNF474Q6S9Z5 364 aaPredicted RBP11.91□□□□□ -0.5
SMTN-202ENST00000347557 H1FXQ92522 213 aaKnown RBP11.91□□□□□ -0.5
SMTN-202ENST00000347557 RCHY1Q96PM5 261 aa11.91□□□□□ -0.5
SMTN-202ENST00000347557 PRNDQ9UKY0 176 aa11.91□□□□□ -0.5
SMTN-202ENST00000347557 TBL2Q9Y4P3 447 aaKnown RBP11.91□□□□□ -0.5
SMTN-202ENST00000347557 TEX50A0A1B0GTY4 177 aa11.9□□□□□ -0.5
SMTN-202ENST00000347557 SAA1P0DJI8 122 aaPredicted RBP11.9□□□□□ -0.5
SMTN-202ENST00000347557 PYYP10082 97 aa11.9□□□□□ -0.5
SMTN-202ENST00000347557 PAFAH1B2P68402 229 aa11.9□□□□□ -0.5
SMTN-202ENST00000347557 FAM27E3Q08E93 113 aa11.9□□□□□ -0.5
SMTN-202ENST00000347557 IBA57Q5T440 356 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms