RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 DRAM1Q8N682 238 aa16.46■□□□□ 0.22
HDAC4-201ENST00000345617 DUX5Q96PT3 197 aa16.46■□□□□ 0.22
HDAC4-201ENST00000345617 TRAV24A0A0B4J272 114 aa16.45■□□□□ 0.22
HDAC4-201ENST00000345617 PSMB11A5LHX3 300 aa16.45■□□□□ 0.22
HDAC4-201ENST00000345617 C9orf172C9J069 976 aa16.45■□□□□ 0.22
HDAC4-201ENST00000345617 SLC25A48Q6ZT89 311 aaKnown RBP16.45■□□□□ 0.22
HDAC4-201ENST00000345617 DTX2Q86UW9 622 aa16.45■□□□□ 0.22
HDAC4-201ENST00000345617 OTORQ9NRC9 128 aa16.45■□□□□ 0.22
HDAC4-201ENST00000345617 C1orf185Q5T7R7 199 aa16.45■□□□□ 0.22
HDAC4-201ENST00000345617 C16orf47Q6ZP98 133 aaPredicted RBP16.45■□□□□ 0.22
HDAC4-201ENST00000345617 PF4V1P10720 104 aa16.45■□□□□ 0.22
HDAC4-201ENST00000345617 NAV3Q8IVL0 2385 aa16.45■□□□□ 0.22
HDAC4-201ENST00000345617 OR52E5Q8NH55 327 aa16.45■□□□□ 0.22
HDAC4-201ENST00000345617 OR5P3Q8WZ94 311 aa16.45■□□□□ 0.22
HDAC4-201ENST00000345617 IGKCP01834 107 aa16.44■□□□□ 0.22
HDAC4-201ENST00000345617 THY1P04216 161 aa16.44■□□□□ 0.22
HDAC4-201ENST00000345617 M0R2P5 195 aa16.44■□□□□ 0.22
HDAC4-201ENST00000345617 MALP21145 153 aa16.44■□□□□ 0.22
HDAC4-201ENST00000345617 PRSS12P56730 875 aa16.44■□□□□ 0.22
HDAC4-201ENST00000345617 SIGLEC14Q08ET2 396 aa16.44■□□□□ 0.22
HDAC4-201ENST00000345617 C1orf210Q8IVY1 113 aa16.44■□□□□ 0.22
HDAC4-201ENST00000345617 M0R381 172 aa16.44■□□□□ 0.22
HDAC4-201ENST00000345617 A0A1W2PPE3 182 aa16.44■□□□□ 0.22
HDAC4-201ENST00000345617 AGFG2O95081 481 aa16.44■□□□□ 0.22
HDAC4-201ENST00000345617 IGHV4-39P01824 125 aa16.44■□□□□ 0.22
HDAC4-201ENST00000345617 ADRA2AP08913 450 aa16.44■□□□□ 0.22
HDAC4-201ENST00000345617 MYOD1P15172 320 aa16.44■□□□□ 0.22
HDAC4-201ENST00000345617 SCO2A0A1W2PP80 73 aa16.44■□□□□ 0.22
HDAC4-201ENST00000345617 PRSS53Q2L4Q9 553 aa16.44■□□□□ 0.22
HDAC4-201ENST00000345617 TRAV1-1A0A0B4J248 108 aa16.44■□□□□ 0.22
HDAC4-201ENST00000345617 IGHV1-69-2A0A0G2JMI3 117 aa16.44■□□□□ 0.22
HDAC4-201ENST00000345617 F8VVB4 439 aa16.44■□□□□ 0.22
HDAC4-201ENST00000345617 F8VWA3 439 aa16.44■□□□□ 0.22
HDAC4-201ENST00000345617 LILRA6Q6PI73 481 aa16.44■□□□□ 0.22
HDAC4-201ENST00000345617 FAM19A2Q8N3H0 131 aa16.44■□□□□ 0.22
HDAC4-201ENST00000345617 ZNF385AQ96PM9 386 aaKnown RBP16.44■□□□□ 0.22
HDAC4-201ENST00000345617 RIPPLY3P57055 190 aa16.43■□□□□ 0.22
HDAC4-201ENST00000345617 CGAP01215 116 aa16.43■□□□□ 0.22
HDAC4-201ENST00000345617 IGKV1D-16P01601 117 aa16.43■□□□□ 0.22
HDAC4-201ENST00000345617 LOXL4Q96JB6 756 aa16.43■□□□□ 0.22
HDAC4-201ENST00000345617 SSBP2P81877 361 aaPredicted RBP16.43■□□□□ 0.22
HDAC4-201ENST00000345617 LHFPL4Q7Z7J7 247 aa16.43■□□□□ 0.22
HDAC4-201ENST00000345617 RAMP1O60894 148 aa16.43■□□□□ 0.22
HDAC4-201ENST00000345617 ICAM4Q14773 271 aa16.43■□□□□ 0.22
HDAC4-201ENST00000345617 A0A1W2PRD5 423 aa16.43■□□□□ 0.22
HDAC4-201ENST00000345617 A0A1W2PRF3 423 aa16.43■□□□□ 0.22
HDAC4-201ENST00000345617 A0A1W2PRM7 423 aa16.43■□□□□ 0.22
HDAC4-201ENST00000345617 CCL8P80075 99 aa16.43■□□□□ 0.22
HDAC4-201ENST00000345617 SLC50A1Q9BRV3 221 aa16.42■□□□□ 0.22
HDAC4-201ENST00000345617 TRBV24-1A0A075B6N3 115 aa16.42■□□□□ 0.22
HDAC4-201ENST00000345617 MPZP25189 248 aa16.42■□□□□ 0.22
HDAC4-201ENST00000345617 ZAR1Q86SH2 424 aa16.42■□□□□ 0.22
HDAC4-201ENST00000345617 NPFFR1Q9GZQ6 430 aa16.42■□□□□ 0.22
HDAC4-201ENST00000345617 Q9H3A6 140 aa16.42■□□□□ 0.22
HDAC4-201ENST00000345617 FOXL1Q12952 345 aa16.42■□□□□ 0.22
HDAC4-201ENST00000345617 GTF3AQ92664 365 aaKnown RBP16.42■□□□□ 0.22
HDAC4-201ENST00000345617 SCARF2Q96GP6 870 aaPredicted RBP16.42■□□□□ 0.22
HDAC4-201ENST00000345617 DMRTA2Q96SC8 542 aa16.42■□□□□ 0.22
HDAC4-201ENST00000345617 IFI27L2Q9H2X8 130 aa16.42■□□□□ 0.22
HDAC4-201ENST00000345617 LAGE3Q14657 143 aa16.42■□□□□ 0.22
HDAC4-201ENST00000345617 TEX45Q8NA69 505 aa16.42■□□□□ 0.22
HDAC4-201ENST00000345617 NTN1O95631 604 aa16.42■□□□□ 0.22
HDAC4-201ENST00000345617 PMS2CLQ68D20 193 aa16.42■□□□□ 0.22
HDAC4-201ENST00000345617 DUSP15Q9H1R2 295 aaPredicted RBP16.42■□□□□ 0.22
HDAC4-201ENST00000345617 IGKV3D-15A0A087WSY6 115 aa16.41■□□□□ 0.22
HDAC4-201ENST00000345617 IGKV3-15P01624 115 aa16.41■□□□□ 0.22
HDAC4-201ENST00000345617 ARPC1AQ92747 370 aa16.41■□□□□ 0.22
HDAC4-201ENST00000345617 TGIF1Q15583 401 aa16.41■□□□□ 0.22
HDAC4-201ENST00000345617 RTN4RL2Q86UN3 420 aa16.41■□□□□ 0.22
HDAC4-201ENST00000345617 ALPK3Q96L96 1907 aa16.41■□□□□ 0.22
HDAC4-201ENST00000345617 TRAV8-1A0A0A6YYK1 113 aa16.41■□□□□ 0.22
HDAC4-201ENST00000345617 ZP1P60852 638 aa16.41■□□□□ 0.22
HDAC4-201ENST00000345617 ERG28Q9UKR5 140 aa16.41■□□□□ 0.22
HDAC4-201ENST00000345617 NAPSAO96009 420 aa16.4■□□□□ 0.22
HDAC4-201ENST00000345617 ZFP36L2P47974 494 aaKnown RBP16.4■□□□□ 0.22
HDAC4-201ENST00000345617 RPL23P62829 140 aaKnown RBP16.4■□□□□ 0.22
HDAC4-201ENST00000345617 TRAV21A0A0B4J279 112 aa16.4■□□□□ 0.22
HDAC4-201ENST00000345617 PLAURQ03405 335 aa16.4■□□□□ 0.22
HDAC4-201ENST00000345617 IGKV3D-11A0A0A0MRZ8 115 aa16.4■□□□□ 0.22
HDAC4-201ENST00000345617 IGKV3-11P04433 115 aa16.4■□□□□ 0.22
HDAC4-201ENST00000345617 C3AR1Q16581 482 aa16.4■□□□□ 0.22
HDAC4-201ENST00000345617 PMVKQ15126 192 aa16.4■□□□□ 0.22
HDAC4-201ENST00000345617 KLF14Q8TD94 323 aaPredicted RBP16.4■□□□□ 0.22
HDAC4-201ENST00000345617 A0A1B0GTI1 187 aa16.4■□□□□ 0.22
HDAC4-201ENST00000345617 MOSP00540 346 aa16.4■□□□□ 0.22
HDAC4-201ENST00000345617 COL11A2P13942 1736 aaPredicted RBP16.4■□□□□ 0.22
HDAC4-201ENST00000345617 NPIPB3Q92617 1050 aa16.4■□□□□ 0.22
HDAC4-201ENST00000345617 IGHV1-45A0A0A0MS14 117 aa16.4■□□□□ 0.22
HDAC4-201ENST00000345617 INAFM2P0DMQ5 153 aa16.4■□□□□ 0.22
HDAC4-201ENST00000345617 ABHD12Q8N2K0 398 aa16.4■□□□□ 0.22
HDAC4-201ENST00000345617 C19orf48Q6RUI8 117 aa16.4■□□□□ 0.22
HDAC4-201ENST00000345617 A0A1W2PRE2 83 aa16.39■□□□□ 0.21
HDAC4-201ENST00000345617 C1orf194Q5T5A4 169 aa16.39■□□□□ 0.21
HDAC4-201ENST00000345617 TMEM42Q69YG0 159 aa16.39■□□□□ 0.21
HDAC4-201ENST00000345617 PPIAL4CA0A0B4J2A2 164 aa16.39■□□□□ 0.21
HDAC4-201ENST00000345617 PPIAL4GP0DN37 164 aa16.39■□□□□ 0.21
HDAC4-201ENST00000345617 ADMP35318 185 aa16.39■□□□□ 0.21
HDAC4-201ENST00000345617 LURAP1LQ8IV03 231 aa16.39■□□□□ 0.21
HDAC4-201ENST00000345617 EAF1Q96JC9 268 aaPredicted RBP16.39■□□□□ 0.21
HDAC4-201ENST00000345617 SEPSECSQ9HD40 501 aaKnown RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms