RNA–Protein interactions for RNA: ENST00000344951.8

CUL3-202, Transcript of cullin 3, humanhuman

TSL 2 BASIC

Gene CUL3, Length 6,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-202ENST00000344951 ATP5G3P48201 142 aa12.66□□□□□ -0.38
CUL3-202ENST00000344951 SRSF6Q13247 344 aaKnown RBP12.66□□□□□ -0.38
CUL3-202ENST00000344951 SUMO4Q6EEV6 95 aa12.66□□□□□ -0.38
CUL3-202ENST00000344951 MEGF9Q9H1U4 602 aa12.66□□□□□ -0.38
CUL3-202ENST00000344951 NHP2Q9NX24 153 aaKnown RBP12.66□□□□□ -0.38
CUL3-202ENST00000344951 DPM3Q9P2X0 92 aa12.66□□□□□ -0.38
CUL3-202ENST00000344951 KIAA0100Q14667 2235 aaKnown RBP12.65□□□□□ -0.38
CUL3-202ENST00000344951 IFNL4K9M1U5 179 aa12.65□□□□□ -0.38
CUL3-202ENST00000344951 PSMG4Q5JS54 123 aa12.65□□□□□ -0.38
CUL3-202ENST00000344951 C5orf67F2Z3F1 127 aa12.65□□□□□ -0.38
CUL3-202ENST00000344951 TMEM249Q2WGJ8 235 aa12.65□□□□□ -0.38
CUL3-202ENST00000344951 Q71RC1 249 aaPredicted RBP12.65□□□□□ -0.38
CUL3-202ENST00000344951 PKIBQ9C010 78 aa12.65□□□□□ -0.38
CUL3-202ENST00000344951 SCN2AQ99250 2005 aa12.65□□□□□ -0.38
CUL3-202ENST00000344951 C1orf53Q5VUE5 145 aa12.65□□□□□ -0.38
CUL3-202ENST00000344951 SEPSECSQ9HD40 501 aaKnown RBP12.65□□□□□ -0.38
CUL3-202ENST00000344951 PEF1Q9UBV8 284 aaKnown RBP12.65□□□□□ -0.38
CUL3-202ENST00000344951 TBR1Q16650 682 aa12.65□□□□□ -0.39
CUL3-202ENST00000344951 TCF23Q7RTU1 214 aa12.65□□□□□ -0.39
CUL3-202ENST00000344951 MRPL32Q9BYC8 188 aaKnown RBP12.65□□□□□ -0.39
CUL3-202ENST00000344951 OTOFQ9HC10 1997 aa12.65□□□□□ -0.39
CUL3-202ENST00000344951 TRAV40A0A0B4J280 105 aa12.64□□□□□ -0.39
CUL3-202ENST00000344951 WDYHV1Q96HA8 205 aa12.64□□□□□ -0.39
CUL3-202ENST00000344951 SPSB2Q99619 263 aa12.64□□□□□ -0.39
CUL3-202ENST00000344951 ZNF257Q9Y2Q1 563 aa12.64□□□□□ -0.39
CUL3-202ENST00000344951 CGB3P0DN86 165 aa12.64□□□□□ -0.39
CUL3-202ENST00000344951 RNF182Q8N6D2 247 aa12.64□□□□□ -0.39
CUL3-202ENST00000344951 UBE2E2Q96LR5 201 aa12.64□□□□□ -0.39
CUL3-202ENST00000344951 NPCDR1Q9BY65 106 aa12.64□□□□□ -0.39
CUL3-202ENST00000344951 TBX6O95947 436 aaPredicted RBP12.64□□□□□ -0.39
CUL3-202ENST00000344951 OR52E5Q8NH55 327 aa12.64□□□□□ -0.39
CUL3-202ENST00000344951 COL24A1Q17RW2 1714 aa12.64□□□□□ -0.39
CUL3-202ENST00000344951 C17orf98A8MV24 154 aa12.64□□□□□ -0.39
CUL3-202ENST00000344951 RNASE7Q9H1E1 156 aaKnown RBP12.64□□□□□ -0.39
CUL3-202ENST00000344951 TPRP12270 2363 aaKnown RBP12.63□□□□□ -0.39
CUL3-202ENST00000344951 A0A087WX48 190 aa12.63□□□□□ -0.39
CUL3-202ENST00000344951 SAXO1Q8IYX7 474 aa12.63□□□□□ -0.39
CUL3-202ENST00000344951 IGKV1D-43A0A0B4J1Z2 117 aa12.63□□□□□ -0.39
CUL3-202ENST00000344951 GGTLC3B5MD39 225 aa12.63□□□□□ -0.39
CUL3-202ENST00000344951 TMEM54Q969K7 222 aa12.63□□□□□ -0.39
CUL3-202ENST00000344951 PAX4O43316 350 aa12.63□□□□□ -0.39
CUL3-202ENST00000344951 ACP7Q6ZNF0 438 aa12.63□□□□□ -0.39
CUL3-202ENST00000344951 IFI27L2Q9H2X8 130 aa12.63□□□□□ -0.39
CUL3-202ENST00000344951 ELOVL5Q9NYP7 299 aa12.63□□□□□ -0.39
CUL3-202ENST00000344951 PLXNB2O15031 1838 aa12.63□□□□□ -0.39
CUL3-202ENST00000344951 A0A0G2JMM0 328 aa12.63□□□□□ -0.39
CUL3-202ENST00000344951 A0A1W2PPB8 328 aa12.63□□□□□ -0.39
CUL3-202ENST00000344951 A0A1W2PRS3 328 aa12.63□□□□□ -0.39
CUL3-202ENST00000344951 KIR3DP1A8MWS1 328 aa12.63□□□□□ -0.39
CUL3-202ENST00000344951 RGPD3A6NKT7 1758 aaPredicted RBP12.63□□□□□ -0.39
CUL3-202ENST00000344951 RGPD4Q7Z3J3 1758 aa12.63□□□□□ -0.39
CUL3-202ENST00000344951 EPOPA6NHQ4 379 aa12.63□□□□□ -0.39
CUL3-202ENST00000344951 CLDN16Q9Y5I7 305 aa12.63□□□□□ -0.39
CUL3-202ENST00000344951 TDRD6O60522 2096 aaKnown RBP12.63□□□□□ -0.39
CUL3-202ENST00000344951 CD300EQ496F6 205 aaPredicted RBP12.62□□□□□ -0.39
CUL3-202ENST00000344951 CECR9P0C854 216 aa12.62□□□□□ -0.39
CUL3-202ENST00000344951 ZNF562Q6V9R5 426 aa12.62□□□□□ -0.39
CUL3-202ENST00000344951 SAP25Q8TEE9 199 aa12.62□□□□□ -0.39
CUL3-202ENST00000344951 OR5P3Q8WZ94 311 aa12.62□□□□□ -0.39
CUL3-202ENST00000344951 COQ2Q96H96 371 aa12.62□□□□□ -0.39
CUL3-202ENST00000344951 RPP21Q9H633 154 aaKnown RBP12.62□□□□□ -0.39
CUL3-202ENST00000344951 TOMM40O96008 361 aa12.62□□□□□ -0.39
CUL3-202ENST00000344951 PRSS22Q9GZN4 317 aa12.62□□□□□ -0.39
CUL3-202ENST00000344951 SCN8AQ9UQD0 1980 aa12.62□□□□□ -0.39
CUL3-202ENST00000344951 KNL1Q8NG31 2342 aa12.62□□□□□ -0.39
CUL3-202ENST00000344951 DICER1Q9UPY3 1922 aaKnown RBP12.62□□□□□ -0.39
CUL3-202ENST00000344951 PTGDSP41222 190 aa12.62□□□□□ -0.39
CUL3-202ENST00000344951 ZNF474Q6S9Z5 364 aaPredicted RBP12.62□□□□□ -0.39
CUL3-202ENST00000344951 A0A087WV48 116 aa12.62□□□□□ -0.39
CUL3-202ENST00000344951 IL36BQ9NZH7 164 aa12.62□□□□□ -0.39
CUL3-202ENST00000344951 ICE1Q9Y2F5 2266 aa12.61□□□□□ -0.39
CUL3-202ENST00000344951 CGB7P0DN87 165 aa12.61□□□□□ -0.39
CUL3-202ENST00000344951 CLPSP04118 112 aa12.61□□□□□ -0.39
CUL3-202ENST00000344951 A0A1B0GUT8 65 aa12.61□□□□□ -0.39
CUL3-202ENST00000344951 CHTOPQ9Y3Y2 248 aaKnown RBP12.61□□□□□ -0.39
CUL3-202ENST00000344951 C19orf67A6NJJ6 358 aa12.61□□□□□ -0.39
CUL3-202ENST00000344951 PRB1P04280 392 aa12.61□□□□□ -0.39
CUL3-202ENST00000344951 ATAD5Q96QE3 1844 aa12.6□□□□□ -0.39
CUL3-202ENST00000344951 UMODP07911 640 aa12.6□□□□□ -0.39
CUL3-202ENST00000344951 PAX1P15863 534 aa12.6□□□□□ -0.39
CUL3-202ENST00000344951 CFHR3Q02985 330 aa12.6□□□□□ -0.39
CUL3-202ENST00000344951 DTX2Q86UW9 622 aa12.6□□□□□ -0.39
CUL3-202ENST00000344951 NEUROG1Q92886 237 aa12.6□□□□□ -0.39
CUL3-202ENST00000344951 NAA38Q9BRA0 125 aaKnown RBP12.6□□□□□ -0.39
CUL3-202ENST00000344951 ANAPC13Q9BS18 74 aa12.6□□□□□ -0.39
CUL3-202ENST00000344951 TDRD15B5MCY1 1934 aaKnown RBP12.6□□□□□ -0.39
CUL3-202ENST00000344951 SCN4AP35499 1836 aa12.6□□□□□ -0.39
CUL3-202ENST00000344951 PRTN3P24158 256 aa12.6□□□□□ -0.39
CUL3-202ENST00000344951 RNF126Q9BV68 326 aa12.6□□□□□ -0.39
CUL3-202ENST00000344951 TRGV1A0A0A0MS02 117 aa12.6□□□□□ -0.39
CUL3-202ENST00000344951 PGPEP1LA6NFU8 196 aa12.6□□□□□ -0.39
CUL3-202ENST00000344951 HIGD1CA8MV81 97 aa12.6□□□□□ -0.39
CUL3-202ENST00000344951 F8WEM9 126 aa12.6□□□□□ -0.39
CUL3-202ENST00000344951 CRIM1Q9NZV1 1036 aa12.6□□□□□ -0.39
CUL3-202ENST00000344951 IFI6P09912 130 aa12.6□□□□□ -0.39
CUL3-202ENST00000344951 RHOGP84095 191 aa12.6□□□□□ -0.39
CUL3-202ENST00000344951 FMC1Q96HJ9 113 aa12.6□□□□□ -0.39
CUL3-202ENST00000344951 LHBP01229 141 aa12.59□□□□□ -0.39
CUL3-202ENST00000344951 ANXA2RQ3ZCQ2 193 aa12.59□□□□□ -0.39
CUL3-202ENST00000344951 LOXL4Q96JB6 756 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms