RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 IGHV3-21A0A0B4J1V1 117 aa16.03■□□□□ 0.16
SMARCB1-202ENST00000344921 INS-IGF2F8WCM5 200 aa16.03■□□□□ 0.16
SMARCB1-202ENST00000344921 SLC25A6P12236 298 aa16.03■□□□□ 0.16
SMARCB1-202ENST00000344921 ZP3P21754 424 aa16.03■□□□□ 0.16
SMARCB1-202ENST00000344921 HOXD3P31249 432 aaPredicted RBP16.03■□□□□ 0.16
SMARCB1-202ENST00000344921 FAM209BQ5JX69 171 aa16.03■□□□□ 0.16
SMARCB1-202ENST00000344921 CLEC19AQ6UXS0 136 aa16.03■□□□□ 0.16
SMARCB1-202ENST00000344921 PINX1Q96BK5 328 aaKnown RBP16.03■□□□□ 0.16
SMARCB1-202ENST00000344921 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.02■□□□□ 0.16
SMARCB1-202ENST00000344921 TRBV7-1A0A0A6YYK4 115 aa16.02■□□□□ 0.16
SMARCB1-202ENST00000344921 RPEL1Q2QD12 228 aa16.02■□□□□ 0.16
SMARCB1-202ENST00000344921 PDLIM3Q53GG5 364 aaPredicted RBP16.02■□□□□ 0.16
SMARCB1-202ENST00000344921 OXLD1Q5BKU9 147 aa16.02■□□□□ 0.16
SMARCB1-202ENST00000344921 ZNF431Q8TF32 576 aaPredicted RBP16.02■□□□□ 0.16
SMARCB1-202ENST00000344921 DCUN1D4Q92564 292 aa16.02■□□□□ 0.16
SMARCB1-202ENST00000344921 DLX4Q92988 240 aaPredicted RBP16.02■□□□□ 0.16
SMARCB1-202ENST00000344921 HSPB7Q9UBY9 170 aa16.02■□□□□ 0.16
SMARCB1-202ENST00000344921 VN1R17PQ8TDU5 208 aa16.02■□□□□ 0.15
SMARCB1-202ENST00000344921 MCRIP2Q9BUT9 160 aaKnown RBP16.02■□□□□ 0.15
SMARCB1-202ENST00000344921 RBKSQ9H477 322 aa16.02■□□□□ 0.15
SMARCB1-202ENST00000344921 PPP5D1E7EU14 171 aa16.01■□□□□ 0.15
SMARCB1-202ENST00000344921 G3V4G9 280 aa16.01■□□□□ 0.15
SMARCB1-202ENST00000344921 OVOL1O14753 267 aa16.01■□□□□ 0.15
SMARCB1-202ENST00000344921 HTR2BP41595 481 aa16.01■□□□□ 0.15
SMARCB1-202ENST00000344921 C1QL4Q86Z23 238 aa16.01■□□□□ 0.15
SMARCB1-202ENST00000344921 DTD1Q8TEA8 209 aa16.01■□□□□ 0.15
SMARCB1-202ENST00000344921 CCDC140Q96MF4 163 aa16.01■□□□□ 0.15
SMARCB1-202ENST00000344921 PITX3O75364 302 aa16■□□□□ 0.15
SMARCB1-202ENST00000344921 RNASE2P10153 161 aaKnown RBP16■□□□□ 0.15
SMARCB1-202ENST00000344921 UBAC2Q8NBM4 344 aa16■□□□□ 0.15
SMARCB1-202ENST00000344921 SCARB1Q8WTV0 552 aa16■□□□□ 0.15
SMARCB1-202ENST00000344921 GPN1Q9HCN4 374 aaPredicted RBP16■□□□□ 0.15
SMARCB1-202ENST00000344921 MPTX1A8MV57 137 aa15.99■□□□□ 0.15
SMARCB1-202ENST00000344921 INMT-MINDY4F8WBC2 141 aa15.99■□□□□ 0.15
SMARCB1-202ENST00000344921 CLEC3BP05452 202 aa15.99■□□□□ 0.15
SMARCB1-202ENST00000344921 ARL3P36405 182 aa15.99■□□□□ 0.15
SMARCB1-202ENST00000344921 C12orf45Q8N5I9 185 aaPredicted RBP15.99■□□□□ 0.15
SMARCB1-202ENST00000344921 ZNF502Q8TBZ5 544 aa15.99■□□□□ 0.15
SMARCB1-202ENST00000344921 ZC4H2Q9NQZ6 224 aa15.99■□□□□ 0.15
SMARCB1-202ENST00000344921 C21orf62Q9NYP8 219 aa15.99■□□□□ 0.15
SMARCB1-202ENST00000344921 BMPR1BO00238 502 aa15.99■□□□□ 0.15
SMARCB1-202ENST00000344921 MT-CO2P00403 227 aa15.99■□□□□ 0.15
SMARCB1-202ENST00000344921 GPR183P32249 361 aa15.99■□□□□ 0.15
SMARCB1-202ENST00000344921 EIF2B2P49770 351 aaKnown RBP15.99■□□□□ 0.15
SMARCB1-202ENST00000344921 TATDN3Q17R31 274 aa15.99■□□□□ 0.15
SMARCB1-202ENST00000344921 SLC24A4Q8NFF2 622 aa15.99■□□□□ 0.15
SMARCB1-202ENST00000344921 NBEAL1Q6ZS30 2694 aa15.98■□□□□ 0.15
SMARCB1-202ENST00000344921 SEC14L6B5MCN3 397 aa15.98■□□□□ 0.15
SMARCB1-202ENST00000344921 FAM90A26D6RGX4 464 aa15.98■□□□□ 0.15
SMARCB1-202ENST00000344921 K7EIM0 57 aa15.98■□□□□ 0.15
SMARCB1-202ENST00000344921 CORTO00230 105 aa15.98■□□□□ 0.15
SMARCB1-202ENST00000344921 GGCTO75223 188 aaKnown RBP15.98■□□□□ 0.15
SMARCB1-202ENST00000344921 MED6O75586 246 aa15.98■□□□□ 0.15
SMARCB1-202ENST00000344921 IFNA10P01566 189 aa15.98■□□□□ 0.15
SMARCB1-202ENST00000344921 IL5P05113 134 aa15.98■□□□□ 0.15
SMARCB1-202ENST00000344921 SYNJ2BPP57105 145 aa15.98■□□□□ 0.15
SMARCB1-202ENST00000344921 Q56UQ5 140 aa15.98■□□□□ 0.15
SMARCB1-202ENST00000344921 NOTCH3Q9UM47 2321 aa15.97■□□□□ 0.15
SMARCB1-202ENST00000344921 FAM25EA8MYX2 175 aa15.97■□□□□ 0.15
SMARCB1-202ENST00000344921 IGHV3-48P01763 117 aa15.97■□□□□ 0.15
SMARCB1-202ENST00000344921 MARVELD1Q9BSK0 173 aa15.97■□□□□ 0.15
SMARCB1-202ENST00000344921 GPR61Q9BZJ8 451 aa15.97■□□□□ 0.15
SMARCB1-202ENST00000344921 MAGT1Q9H0U3 335 aa15.97■□□□□ 0.15
SMARCB1-202ENST00000344921 GSKIPQ9P0R6 139 aa15.97■□□□□ 0.15
SMARCB1-202ENST00000344921 OR2T8A6NH00 312 aa15.97■□□□□ 0.15
SMARCB1-202ENST00000344921 I3L2K1 104 aa15.97■□□□□ 0.15
SMARCB1-202ENST00000344921 CCSO14618 274 aa15.97■□□□□ 0.15
SMARCB1-202ENST00000344921 OR2C1O95371 312 aa15.97■□□□□ 0.15
SMARCB1-202ENST00000344921 OPRK1P41145 380 aa15.97■□□□□ 0.15
SMARCB1-202ENST00000344921 KLF5Q13887 457 aaPredicted RBP15.97■□□□□ 0.15
SMARCB1-202ENST00000344921 IAH1Q2TAA2 248 aaPredicted RBP15.97■□□□□ 0.15
SMARCB1-202ENST00000344921 SAMD5Q5TGI4 173 aa15.97■□□□□ 0.15
SMARCB1-202ENST00000344921 C11orf87Q6NUJ2 197 aa15.97■□□□□ 0.15
SMARCB1-202ENST00000344921 CHAC2Q8WUX2 184 aa15.97■□□□□ 0.15
SMARCB1-202ENST00000344921 OR10C1Q96KK4 312 aa15.97■□□□□ 0.15
SMARCB1-202ENST00000344921 U3KQ87 197 aa15.97■□□□□ 0.15
SMARCB1-202ENST00000344921 PRAF2O60831 178 aa15.96■□□□□ 0.15
SMARCB1-202ENST00000344921 IAPPP10997 89 aa15.96■□□□□ 0.15
SMARCB1-202ENST00000344921 NPY1RP25929 384 aa15.96■□□□□ 0.15
SMARCB1-202ENST00000344921 MFAP4P55083 255 aa15.96■□□□□ 0.15
SMARCB1-202ENST00000344921 BSXQ3C1V8 233 aa15.96■□□□□ 0.15
SMARCB1-202ENST00000344921 C2orf83Q53S99 150 aa15.96■□□□□ 0.15
SMARCB1-202ENST00000344921 C9orf66Q5T8R8 295 aa15.96■□□□□ 0.15
SMARCB1-202ENST00000344921 NOXA1Q86UR1 476 aa15.96■□□□□ 0.15
SMARCB1-202ENST00000344921 C5orf51A6NDU8 294 aa15.95■□□□□ 0.14
SMARCB1-202ENST00000344921 WRBO00258 174 aa15.95■□□□□ 0.14
SMARCB1-202ENST00000344921 SYNGR2O43760 224 aa15.95■□□□□ 0.14
SMARCB1-202ENST00000344921 SCGB1D2O95969 90 aa15.95■□□□□ 0.14
SMARCB1-202ENST00000344921 PTTG1O95997 202 aa15.95■□□□□ 0.14
SMARCB1-202ENST00000344921 NKX2-1P43699 371 aaPredicted RBP15.95■□□□□ 0.14
SMARCB1-202ENST00000344921 ELOVL1Q9BW60 279 aa15.95■□□□□ 0.14
SMARCB1-202ENST00000344921 TGOLN2O43493 480 aa15.94■□□□□ 0.14
SMARCB1-202ENST00000344921 SAP30O75446 220 aa15.94■□□□□ 0.14
SMARCB1-202ENST00000344921 SPNP16150 400 aa15.94■□□□□ 0.14
SMARCB1-202ENST00000344921 ACSM6Q6P461 480 aa15.94■□□□□ 0.14
SMARCB1-202ENST00000344921 BSCL2Q96G97 398 aaPredicted RBP15.94■□□□□ 0.14
SMARCB1-202ENST00000344921 CIB3Q96Q77 187 aaPredicted RBP15.94■□□□□ 0.14
SMARCB1-202ENST00000344921 GAR1Q9NY12 217 aaKnown RBP15.94■□□□□ 0.14
SMARCB1-202ENST00000344921 OR4D5Q8NGN0 318 aa15.94■□□□□ 0.14
SMARCB1-202ENST00000344921 OR4C12Q96R67 309 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms